RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 TRAV12-2A0A075B6T6 113 aa18.14■□□□□ 0.49
LSM6-202ENST00000502781 IGHV4-28A0A0C4DH34 117 aa18.14■□□□□ 0.49
LSM6-202ENST00000502781 FGF8P55075 233 aaPredicted RBP18.14■□□□□ 0.49
LSM6-202ENST00000502781 A0A1W2PRE2 83 aa18.13■□□□□ 0.49
LSM6-202ENST00000502781 SMIM9A6NGZ8 99 aa18.13■□□□□ 0.49
LSM6-202ENST00000502781 RBMY1A1P0DJD3 496 aaKnown RBP18.13■□□□□ 0.49
LSM6-202ENST00000502781 RBMY1CP0DJD4 496 aa18.13■□□□□ 0.49
LSM6-202ENST00000502781 KIR3DS1Q14943 382 aa18.13■□□□□ 0.49
LSM6-202ENST00000502781 RBMY1FQ15415 496 aaKnown RBP18.13■□□□□ 0.49
LSM6-202ENST00000502781 EIF5AL1Q6IS14 154 aaKnown RBP18.13■□□□□ 0.49
LSM6-202ENST00000502781 MUC7Q8TAX7 377 aa18.13■□□□□ 0.49
LSM6-202ENST00000502781 CMTM2Q8TAZ6 248 aa18.13■□□□□ 0.49
LSM6-202ENST00000502781 FAM213BQ8TBF2 198 aa18.13■□□□□ 0.49
LSM6-202ENST00000502781 ZNF492Q9P255 531 aa18.13■□□□□ 0.49
LSM6-202ENST00000502781 GGTLC3B5MD39 225 aa18.12■□□□□ 0.49
LSM6-202ENST00000502781 LEPP41159 167 aa18.12■□□□□ 0.49
LSM6-202ENST00000502781 TMEM78Q5T7P6 136 aa18.12■□□□□ 0.49
LSM6-202ENST00000502781 IGHV3OR16-12A0A075B7B8 117 aa18.11■□□□□ 0.49
LSM6-202ENST00000502781 TRBV7-9A0A0J9YWB2 115 aa18.11■□□□□ 0.49
LSM6-202ENST00000502781 CRISP2P16562 243 aa18.11■□□□□ 0.49
LSM6-202ENST00000502781 IQCF2Q8IXL9 164 aa18.11■□□□□ 0.49
LSM6-202ENST00000502781 C5orf17Q8NAS9 161 aa18.11■□□□□ 0.49
LSM6-202ENST00000502781 C20orf144Q9BQM9 153 aa18.11■□□□□ 0.49
LSM6-202ENST00000502781 KLLNB2CW77 178 aa18.1■□□□□ 0.49
LSM6-202ENST00000502781 DEFB4AO15263 64 aa18.1■□□□□ 0.49
LSM6-202ENST00000502781 NMBP08949 121 aa18.1■□□□□ 0.49
LSM6-202ENST00000502781 RAB5CP51148 216 aa18.1■□□□□ 0.49
LSM6-202ENST00000502781 NKX2-5P52952 324 aaPredicted RBP18.1■□□□□ 0.49
LSM6-202ENST00000502781 SUMO1P63165 101 aaKnown RBP18.1■□□□□ 0.49
LSM6-202ENST00000502781 GFI1BQ5VTD9 330 aa18.1■□□□□ 0.49
LSM6-202ENST00000502781 IL17DQ8TAD2 202 aa18.1■□□□□ 0.49
LSM6-202ENST00000502781 YTHDF2Q9Y5A9 579 aaKnown RBP18.1■□□□□ 0.49
LSM6-202ENST00000502781 ZNF138P52744 262 aa18.09■□□□□ 0.49
LSM6-202ENST00000502781 TMEM256Q8N2U0 113 aa18.09■□□□□ 0.49
LSM6-202ENST00000502781 SFT2D1Q8WV19 159 aa18.09■□□□□ 0.49
LSM6-202ENST00000502781 SULT1A2P50226 295 aa18.08■□□□□ 0.49
LSM6-202ENST00000502781 GNG5P63218 68 aa18.08■□□□□ 0.49
LSM6-202ENST00000502781 ZFAND2AQ8N6M9 145 aa18.08■□□□□ 0.49
LSM6-202ENST00000502781 FAM74A7A6NL05 159 aa18.07■□□□□ 0.48
LSM6-202ENST00000502781 C3orf84H3BNL1 204 aa18.07■□□□□ 0.48
LSM6-202ENST00000502781 TCRAP04437 139 aa18.07■□□□□ 0.48
LSM6-202ENST00000502781 H2AFB1P0C5Y9 115 aa18.07■□□□□ 0.48
LSM6-202ENST00000502781 GOLT1AQ6ZVE7 132 aa18.07■□□□□ 0.48
LSM6-202ENST00000502781 Q8TAT8 98 aa18.07■□□□□ 0.48
LSM6-202ENST00000502781 TMEM208Q9BTX3 173 aa18.07■□□□□ 0.48
LSM6-202ENST00000502781 LENEPQ9Y5L5 61 aa18.07■□□□□ 0.48
LSM6-202ENST00000502781 SERTM2A0A1B0GWG4 89 aa18.06■□□□□ 0.48
LSM6-202ENST00000502781 HBE1P02100 147 aa18.06■□□□□ 0.48
LSM6-202ENST00000502781 NKX6-2Q9C056 277 aaPredicted RBP18.06■□□□□ 0.48
LSM6-202ENST00000502781 EPDR1Q9UM22 224 aa18.06■□□□□ 0.48
LSM6-202ENST00000502781 RPH3ALQ9UNE2 315 aa18.06■□□□□ 0.48
LSM6-202ENST00000502781 UBE2G2P60604 165 aa18.05■□□□□ 0.48
LSM6-202ENST00000502781 RRN3P1Q2M238 152 aa18.05■□□□□ 0.48
LSM6-202ENST00000502781 ARL2-SNX15V9GYD0 113 aa18.05■□□□□ 0.48
LSM6-202ENST00000502781 TRAV1-1A0A0B4J248 108 aa18.04■□□□□ 0.48
LSM6-202ENST00000502781 H7BYZ3 331 aa18.04■□□□□ 0.48
LSM6-202ENST00000502781 C7orf71A4D174 169 aa18.04■□□□□ 0.48
LSM6-202ENST00000502781 TMEM189A5PLL7 270 aa18.04■□□□□ 0.48
LSM6-202ENST00000502781 J3KRW8 73 aa18.04■□□□□ 0.48
LSM6-202ENST00000502781 ZNF324O75467 553 aaPredicted RBP18.04■□□□□ 0.48
LSM6-202ENST00000502781 TAS2R60P59551 318 aa18.04■□□□□ 0.48
LSM6-202ENST00000502781 CCDC28AQ8IWP9 274 aa18.04■□□□□ 0.48
LSM6-202ENST00000502781 LINC01587Q99440 93 aa18.04■□□□□ 0.48
LSM6-202ENST00000502781 BOLA1Q9Y3E2 137 aa18.04■□□□□ 0.48
LSM6-202ENST00000502781 TRAV8-1A0A0A6YYK1 113 aa18.03■□□□□ 0.48
LSM6-202ENST00000502781 PRR9Q5T870 116 aa18.03■□□□□ 0.48
LSM6-202ENST00000502781 TRAV12-3A0A0B4J271 114 aa18.02■□□□□ 0.47
LSM6-202ENST00000502781 LOC102723971A0A1B0GUV8 181 aa18.02■□□□□ 0.47
LSM6-202ENST00000502781 ZNF705GA8MUZ8 300 aaPredicted RBP18.02■□□□□ 0.47
LSM6-202ENST00000502781 PRM2P04554 102 aa18.02■□□□□ 0.47
LSM6-202ENST00000502781 GPX1P07203 203 aa18.02■□□□□ 0.47
LSM6-202ENST00000502781 CYB561D1Q8N8Q1 229 aa18.02■□□□□ 0.47
LSM6-202ENST00000502781 C11orf45Q8TAV5 145 aa18.02■□□□□ 0.47
LSM6-202ENST00000502781 ATG101Q9BSB4 218 aa18.02■□□□□ 0.47
LSM6-202ENST00000502781 IGLV2-11P01706 119 aa18.01■□□□□ 0.47
LSM6-202ENST00000502781 BTN1A1Q13410 526 aa18.01■□□□□ 0.47
LSM6-202ENST00000502781 CASC10Q5T4H9 136 aa18.01■□□□□ 0.47
LSM6-202ENST00000502781 NIPSNAP3BQ9BS92 247 aa18.01■□□□□ 0.47
LSM6-202ENST00000502781 A0A1B0GV50 99 aa18■□□□□ 0.47
LSM6-202ENST00000502781 K7EQM0 130 aa18■□□□□ 0.47
LSM6-202ENST00000502781 AZU1P20160 251 aa18■□□□□ 0.47
LSM6-202ENST00000502781 RNASE4P34096 147 aaKnown RBP18■□□□□ 0.47
LSM6-202ENST00000502781 TVP23CQ96ET8 276 aa18■□□□□ 0.47
LSM6-202ENST00000502781 TCEAL7Q9BRU2 100 aa18■□□□□ 0.47
LSM6-202ENST00000502781 CELA1Q9UNI1 258 aa18■□□□□ 0.47
LSM6-202ENST00000502781 PLAC8L1A1L4L8 177 aa17.99■□□□□ 0.47
LSM6-202ENST00000502781 PAGE4O60829 102 aa17.99■□□□□ 0.47
LSM6-202ENST00000502781 IFNA7P01567 189 aa17.99■□□□□ 0.47
LSM6-202ENST00000502781 PPT1P50897 306 aa17.99■□□□□ 0.47
LSM6-202ENST00000502781 TMEM75Q8N9X5 138 aa17.99■□□□□ 0.47
LSM6-202ENST00000502781 HIST1H2BAQ96A08 127 aa17.99■□□□□ 0.47
LSM6-202ENST00000502781 PYGO2Q9BRQ0 406 aa17.99■□□□□ 0.47
LSM6-202ENST00000502781 LINC00467Q9BRT7 94 aa17.99■□□□□ 0.47
LSM6-202ENST00000502781 FBLL1A6NHQ2 334 aaKnown RBP17.98■□□□□ 0.47
LSM6-202ENST00000502781 CCL20P78556 96 aa17.98■□□□□ 0.47
LSM6-202ENST00000502781 ZFAND6Q6FIF0 208 aa17.98■□□□□ 0.47
LSM6-202ENST00000502781 ALKAL2Q6UX46 152 aa17.98■□□□□ 0.47
LSM6-202ENST00000502781 PEX7O00628 323 aa17.97■□□□□ 0.47
LSM6-202ENST00000502781 NANOS2P60321 138 aaKnown RBP17.97■□□□□ 0.47
LSM6-202ENST00000502781 Q6AWC8 147 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms