RNA–Protein interactions for RNA: ENST00000498658.5

FXR1-222, Transcript of FMR1 autosomal homolog 1, human

TSL 2

Gene FXR1, Length 683 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FXR1-222	ENST00000498658	FXYD6-FXYD2	A0A087WZ82	144 aa		7.52	□□□□□ -1.21
FXR1-222	ENST00000498658	ZNF705G	A8MUZ8	300 aa	Predicted RBP	7.52	□□□□□ -1.21
FXR1-222	ENST00000498658	EIF4EBP3	O60516	100 aa	Predicted RBP	7.52	□□□□□ -1.21
FXR1-222	ENST00000498658	SLC25A5	P05141	298 aa	Known RBP	7.52	□□□□□ -1.21
FXR1-222	ENST00000498658	CT45A10	P0DMU9	189 aa		7.52	□□□□□ -1.21
FXR1-222	ENST00000498658	TMEM78	Q5T7P6	136 aa		7.52	□□□□□ -1.21
FXR1-222	ENST00000498658	C9orf47	Q6ZRZ4	202 aa		7.52	□□□□□ -1.21
FXR1-222	ENST00000498658	OR10G4	Q8NGN3	311 aa		7.52	□□□□□ -1.21
FXR1-222	ENST00000498658	OR10G9	Q8NGN4	311 aa		7.52	□□□□□ -1.21
FXR1-222	ENST00000498658	OR10G7	Q8NGN6	311 aa		7.52	□□□□□ -1.21
FXR1-222	ENST00000498658	GNPNAT1	Q96EK6	184 aa	Predicted RBP	7.52	□□□□□ -1.21
FXR1-222	ENST00000498658	TNFSF18	Q9UNG2	199 aa		7.52	□□□□□ -1.21
FXR1-222	ENST00000498658	TRBV7-9	A0A0J9YWB2	115 aa		7.51	□□□□□ -1.21
FXR1-222	ENST00000498658	RBAKDN	A6NC62	111 aa		7.51	□□□□□ -1.21
FXR1-222	ENST00000498658	TAAR5	O14804	337 aa		7.51	□□□□□ -1.21
FXR1-222	ENST00000498658	DAD1	P61803	113 aa		7.51	□□□□□ -1.21
FXR1-222	ENST00000498658	RAN	P62826	216 aa	Known RBP	7.51	□□□□□ -1.21
FXR1-222	ENST00000498658		Q5BKY6	102 aa		7.51	□□□□□ -1.21
FXR1-222	ENST00000498658	GFI1B	Q5VTD9	330 aa		7.51	□□□□□ -1.21
FXR1-222	ENST00000498658	FAM122C	Q6P4D5	195 aa		7.51	□□□□□ -1.21
FXR1-222	ENST00000498658	ARL6IP6	Q8N6S5	226 aa		7.51	□□□□□ -1.21
FXR1-222	ENST00000498658	HSD17B11	Q8NBQ5	300 aa		7.51	□□□□□ -1.21
FXR1-222	ENST00000498658	TMEM263	Q8WUH6	116 aa	Known RBP	7.51	□□□□□ -1.21
FXR1-222	ENST00000498658	PYGO2	Q9BRQ0	406 aa		7.51	□□□□□ -1.21
FXR1-222	ENST00000498658	NDUFAF3	Q9BU61	184 aa		7.51	□□□□□ -1.21
FXR1-222	ENST00000498658	IGHV4-4	A0A075B6R2	117 aa		7.5	□□□□□ -1.21
FXR1-222	ENST00000498658	HTN1	P15515	57 aa		7.5	□□□□□ -1.21
FXR1-222	ENST00000498658	ATP6V0C	P27449	155 aa		7.5	□□□□□ -1.21
FXR1-222	ENST00000498658	CDC34	P49427	236 aa	Predicted RBP	7.5	□□□□□ -1.21
FXR1-222	ENST00000498658	ZNF138	P52744	262 aa		7.5	□□□□□ -1.21
FXR1-222	ENST00000498658	RAB2A	P61019	212 aa		7.5	□□□□□ -1.21
FXR1-222	ENST00000498658	ZNF767P	Q75MW2	155 aa		7.5	□□□□□ -1.21
FXR1-222	ENST00000498658	CMTM2	Q8TAZ6	248 aa		7.5	□□□□□ -1.21
FXR1-222	ENST00000498658	ZNF503	Q96F45	646 aa		7.5	□□□□□ -1.21
FXR1-222	ENST00000498658	PHYHIPL	Q96FC7	376 aa		7.5	□□□□□ -1.21
FXR1-222	ENST00000498658	FAM19A4	Q96LR4	140 aa		7.5	□□□□□ -1.21
FXR1-222	ENST00000498658	AGPAT4-IT1	Q9H0P7	198 aa		7.5	□□□□□ -1.21
FXR1-222	ENST00000498658		Q9H3A6	140 aa		7.5	□□□□□ -1.21
FXR1-222	ENST00000498658	OTOR	Q9NRC9	128 aa		7.5	□□□□□ -1.21
FXR1-222	ENST00000498658	APLN	Q9ULZ1	77 aa		7.5	□□□□□ -1.21
FXR1-222	ENST00000498658	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	7.5	□□□□□ -1.21
FXR1-222	ENST00000498658	TRAV12-3	A0A0B4J271	114 aa		7.49	□□□□□ -1.21
FXR1-222	ENST00000498658	C7orf71	A4D174	169 aa		7.49	□□□□□ -1.21
FXR1-222	ENST00000498658	RNF222	A6NCQ9	220 aa		7.49	□□□□□ -1.21
FXR1-222	ENST00000498658	KLLN	B2CW77	178 aa		7.49	□□□□□ -1.21
FXR1-222	ENST00000498658	GPX1	P07203	203 aa		7.49	□□□□□ -1.21
FXR1-222	ENST00000498658	CRISP2	P16562	243 aa		7.49	□□□□□ -1.21
FXR1-222	ENST00000498658	ERCC8	Q13216	396 aa		7.49	□□□□□ -1.21
FXR1-222	ENST00000498658	RNASE8	Q8TDE3	154 aa	Known RBP	7.49	□□□□□ -1.21
FXR1-222	ENST00000498658	ACTR3C	Q9C0K3	210 aa	Predicted RBP	7.49	□□□□□ -1.21
FXR1-222	ENST00000498658	ZNF492	Q9P255	531 aa		7.49	□□□□□ -1.21
FXR1-222	ENST00000498658	LENEP	Q9Y5L5	61 aa		7.49	□□□□□ -1.21
FXR1-222	ENST00000498658	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	7.48	□□□□□ -1.21
FXR1-222	ENST00000498658	SERTM2	A0A1B0GWG4	89 aa		7.48	□□□□□ -1.21
FXR1-222	ENST00000498658	CBY3	A6NI87	242 aa		7.48	□□□□□ -1.21
FXR1-222	ENST00000498658	SNURFL	B1AK76	121 aa		7.48	□□□□□ -1.21
FXR1-222	ENST00000498658		J3KRW8	73 aa		7.48	□□□□□ -1.21
FXR1-222	ENST00000498658	ARPC5	O15511	151 aa		7.48	□□□□□ -1.21
FXR1-222	ENST00000498658	IGKV2D-40	P01614	121 aa	Predicted RBP	7.48	□□□□□ -1.21
FXR1-222	ENST00000498658	STAG3L2	P0CL84	134 aa		7.48	□□□□□ -1.21
FXR1-222	ENST00000498658	STAG3L3	P0CL85	134 aa		7.48	□□□□□ -1.21
FXR1-222	ENST00000498658	PRB4	P10163	310 aa	Predicted RBP	7.48	□□□□□ -1.21
FXR1-222	ENST00000498658	AZU1	P20160	251 aa		7.48	□□□□□ -1.21
FXR1-222	ENST00000498658	ZNF680	Q8NEM1	530 aa		7.48	□□□□□ -1.21
FXR1-222	ENST00000498658	TMED6	Q8WW62	240 aa		7.48	□□□□□ -1.21
FXR1-222	ENST00000498658	RAB24	Q969Q5	203 aa		7.48	□□□□□ -1.21
FXR1-222	ENST00000498658	LINC00467	Q9BRT7	94 aa		7.48	□□□□□ -1.21
FXR1-222	ENST00000498658	TMEM167B	Q9NRX6	74 aa		7.48	□□□□□ -1.21
FXR1-222	ENST00000498658	PLAC8L1	A1L4L8	177 aa		7.47	□□□□□ -1.21
FXR1-222	ENST00000498658	PGP	A6NDG6	321 aa		7.47	□□□□□ -1.21
FXR1-222	ENST00000498658	DIRC3	C9JPN6	131 aa		7.47	□□□□□ -1.21
FXR1-222	ENST00000498658	CXorf1	O96002	111 aa		7.47	□□□□□ -1.21
FXR1-222	ENST00000498658	PRM2	P04554	102 aa		7.47	□□□□□ -1.21
FXR1-222	ENST00000498658	ARL14EPL	P0DKL9	152 aa		7.47	□□□□□ -1.21
FXR1-222	ENST00000498658		P0DMU3	169 aa		7.47	□□□□□ -1.21
FXR1-222	ENST00000498658	FAM231A	P0DMU4	169 aa		7.47	□□□□□ -1.21
FXR1-222	ENST00000498658	FAM231C	P0DMU5	169 aa		7.47	□□□□□ -1.21
FXR1-222	ENST00000498658	DEFB130B	P0DP73	79 aa		7.47	□□□□□ -1.21
FXR1-222	ENST00000498658	DEFB130A	P0DP74	79 aa		7.47	□□□□□ -1.21
FXR1-222	ENST00000498658	RNASE4	P34096	147 aa	Known RBP	7.47	□□□□□ -1.21
FXR1-222	ENST00000498658	ZNF345	Q14585	488 aa		7.47	□□□□□ -1.21
FXR1-222	ENST00000498658	KIR3DS1	Q14943	382 aa		7.47	□□□□□ -1.21
FXR1-222	ENST00000498658	RPL7L1	Q6DKI1	246 aa	Known RBP	7.47	□□□□□ -1.21
FXR1-222	ENST00000498658	EIF4E3	Q8N5X7	224 aa	Known RBP	7.47	□□□□□ -1.21
FXR1-222	ENST00000498658	HYLS1	Q96M11	299 aa		7.47	□□□□□ -1.21
FXR1-222	ENST00000498658	VGLL1	Q99990	258 aa		7.47	□□□□□ -1.21
FXR1-222	ENST00000498658	HMSD	A8MTL9	139 aa		7.46	□□□□□ -1.22
FXR1-222	ENST00000498658		G3V3Q6	166 aa		7.46	□□□□□ -1.22
FXR1-222	ENST00000498658		K7EQM0	130 aa		7.46	□□□□□ -1.22
FXR1-222	ENST00000498658	RGS13	O14921	159 aa		7.46	□□□□□ -1.22
FXR1-222	ENST00000498658	HMGB3	O15347	200 aa	Known RBP	7.46	□□□□□ -1.22
FXR1-222	ENST00000498658	ZNF324	O75467	553 aa	Predicted RBP	7.46	□□□□□ -1.22
FXR1-222	ENST00000498658	ATP5G1	P05496	136 aa		7.46	□□□□□ -1.22
FXR1-222	ENST00000498658	HTN3	P15516	51 aa		7.46	□□□□□ -1.22
FXR1-222	ENST00000498658	ATP5G3	P48201	142 aa		7.46	□□□□□ -1.22
FXR1-222	ENST00000498658	DAZ2	Q13117	558 aa	Known RBP	7.46	□□□□□ -1.22
FXR1-222	ENST00000498658	ANXA2R	Q3ZCQ2	193 aa		7.46	□□□□□ -1.22
FXR1-222	ENST00000498658	AKR1C8P	Q5T2L2	129 aa		7.46	□□□□□ -1.22
FXR1-222	ENST00000498658	ZFAND2A	Q8N6M9	145 aa		7.46	□□□□□ -1.22
FXR1-222	ENST00000498658	SUN5	Q8TC36	379 aa		7.46	□□□□□ -1.22

Retrieved 100 of 20,778 RNA–protein pairs in 113.5 ms