RNA–Protein interactions for RNA: ENST00000498495.1

HSPG2-213, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-213ENST00000498495 FAM74A1Q5RGS3 127 aa9.15□□□□□ -0.94
HSPG2-213ENST00000498495 TMEM78Q5T7P6 136 aa9.15□□□□□ -0.94
HSPG2-213ENST00000498495 GFI1BQ5VTD9 330 aa9.15□□□□□ -0.94
HSPG2-213ENST00000498495 RXFP4Q8TDU9 374 aa9.15□□□□□ -0.94
HSPG2-213ENST00000498495 IGKV2-40A0A087WW87 121 aaPredicted RBP9.14□□□□□ -0.95
HSPG2-213ENST00000498495 TRAV12-3A0A0B4J271 114 aa9.14□□□□□ -0.95
HSPG2-213ENST00000498495 IGKV2D-40P01614 121 aaPredicted RBP9.14□□□□□ -0.95
HSPG2-213ENST00000498495 GPX1P07203 203 aa9.14□□□□□ -0.95
HSPG2-213ENST00000498495 STAG3L2P0CL84 134 aa9.14□□□□□ -0.95
HSPG2-213ENST00000498495 STAG3L3P0CL85 134 aa9.14□□□□□ -0.95
HSPG2-213ENST00000498495 ZNF493Q6ZR52 646 aa9.14□□□□□ -0.95
HSPG2-213ENST00000498495 CCDC28AQ8IWP9 274 aa9.14□□□□□ -0.95
HSPG2-213ENST00000498495 LINC00476Q8WZB0 136 aa9.14□□□□□ -0.95
HSPG2-213ENST00000498495 RAB24Q969Q5 203 aa9.14□□□□□ -0.95
HSPG2-213ENST00000498495 HYLS1Q96M11 299 aa9.14□□□□□ -0.95
HSPG2-213ENST00000498495 VGLL1Q99990 258 aa9.14□□□□□ -0.95
HSPG2-213ENST00000498495 ACTR3CQ9C0K3 210 aaPredicted RBP9.14□□□□□ -0.95
HSPG2-213ENST00000498495 SH3BGRL3Q9H299 93 aa9.14□□□□□ -0.95
HSPG2-213ENST00000498495 LYRM9A8MSI8 78 aa9.13□□□□□ -0.95
HSPG2-213ENST00000498495 DAD1P61803 113 aa9.13□□□□□ -0.95
HSPG2-213ENST00000498495 CMTM2Q8TAZ6 248 aa9.13□□□□□ -0.95
HSPG2-213ENST00000498495 C16orf74Q96GX8 76 aa9.13□□□□□ -0.95
HSPG2-213ENST00000498495 FAM19A4Q96LR4 140 aa9.13□□□□□ -0.95
HSPG2-213ENST00000498495 OTORQ9NRC9 128 aa9.13□□□□□ -0.95
HSPG2-213ENST00000498495 ZNF492Q9P255 531 aa9.13□□□□□ -0.95
HSPG2-213ENST00000498495 TENM2Q9NT68 2774 aa9.13□□□□□ -0.95
HSPG2-213ENST00000498495 C7orf71A4D174 169 aa9.12□□□□□ -0.95
HSPG2-213ENST00000498495 RBAKDNA6NC62 111 aa9.12□□□□□ -0.95
HSPG2-213ENST00000498495 DIRC3C9JPN6 131 aa9.12□□□□□ -0.95
HSPG2-213ENST00000498495 NMBP08949 121 aa9.12□□□□□ -0.95
HSPG2-213ENST00000498495 ARL14EPLP0DKL9 152 aa9.12□□□□□ -0.95
HSPG2-213ENST00000498495 RNASE4P34096 147 aaKnown RBP9.12□□□□□ -0.95
HSPG2-213ENST00000498495 ZNF138P52744 262 aa9.12□□□□□ -0.95
HSPG2-213ENST00000498495 PYGO2Q9BRQ0 406 aa9.12□□□□□ -0.95
HSPG2-213ENST00000498495 APLNQ9ULZ1 77 aa9.12□□□□□ -0.95
HSPG2-213ENST00000498495 IGHV4-4A0A075B6R2 117 aa9.11□□□□□ -0.95
HSPG2-213ENST00000498495 PLAC8L1A1L4L8 177 aa9.11□□□□□ -0.95
HSPG2-213ENST00000498495 HMSDA8MTL9 139 aa9.11□□□□□ -0.95
HSPG2-213ENST00000498495 KLLNB2CW77 178 aa9.11□□□□□ -0.95
HSPG2-213ENST00000498495 CXorf1O96002 111 aa9.11□□□□□ -0.95
HSPG2-213ENST00000498495 DEFB130BP0DP73 79 aa9.11□□□□□ -0.95
HSPG2-213ENST00000498495 DEFB130AP0DP74 79 aa9.11□□□□□ -0.95
HSPG2-213ENST00000498495 HTN3P15516 51 aa9.11□□□□□ -0.95
HSPG2-213ENST00000498495 CRISP2P16562 243 aa9.11□□□□□ -0.95
HSPG2-213ENST00000498495 GCHFRP30047 84 aa9.11□□□□□ -0.95
HSPG2-213ENST00000498495 CD300CQ08708 224 aa9.11□□□□□ -0.95
HSPG2-213ENST00000498495 AKR1C8PQ5T2L2 129 aa9.11□□□□□ -0.95
HSPG2-213ENST00000498495 LGALS9CQ6DKI2 356 aa9.11□□□□□ -0.95
HSPG2-213ENST00000498495 TMEM263Q8WUH6 116 aaKnown RBP9.11□□□□□ -0.95
HSPG2-213ENST00000498495 ARPC5LQ9BPX5 153 aa9.11□□□□□ -0.95
HSPG2-213ENST00000498495 CYTL1Q9NRR1 136 aa9.11□□□□□ -0.95
HSPG2-213ENST00000498495 RPH3ALQ9UNE2 315 aa9.11□□□□□ -0.95
HSPG2-213ENST00000498495 TIMM8BQ9Y5J9 83 aaPredicted RBP9.11□□□□□ -0.95
HSPG2-213ENST00000498495 A0A0D9SG52 128 aa9.1□□□□□ -0.95
HSPG2-213ENST00000498495 TRBV7-9A0A0J9YWB2 115 aa9.1□□□□□ -0.95
HSPG2-213ENST00000498495 ZNF324O75467 553 aaPredicted RBP9.1□□□□□ -0.95
HSPG2-213ENST00000498495 BTN1A1Q13410 526 aa9.1□□□□□ -0.95
HSPG2-213ENST00000498495 ZNF345Q14585 488 aa9.1□□□□□ -0.95
HSPG2-213ENST00000498495 KCNRGQ8N5I3 272 aa9.1□□□□□ -0.95
HSPG2-213ENST00000498495 ARL6IP6Q8N6S5 226 aa9.1□□□□□ -0.95
HSPG2-213ENST00000498495 OR11H4Q8NGC9 324 aa9.1□□□□□ -0.95
HSPG2-213ENST00000498495 RNASE8Q8TDE3 154 aaKnown RBP9.1□□□□□ -0.95
HSPG2-213ENST00000498495 NDUFAF3Q9BU61 184 aa9.1□□□□□ -0.95
HSPG2-213ENST00000498495 NOP10Q9NPE3 64 aaKnown RBP9.1□□□□□ -0.95
HSPG2-213ENST00000498495 TMEM167BQ9NRX6 74 aa9.1□□□□□ -0.95
HSPG2-213ENST00000498495 DYNC2H1Q8NCM8 4307 aaKnown RBP9.1□□□□□ -0.95
HSPG2-213ENST00000498495 SNURFLB1AK76 121 aa9.09□□□□□ -0.95
HSPG2-213ENST00000498495 IQCF2Q8IXL9 164 aa9.09□□□□□ -0.95
HSPG2-213ENST00000498495 ZFAND2AQ8N6M9 145 aa9.09□□□□□ -0.95
HSPG2-213ENST00000498495 Q8TAT8 98 aa9.09□□□□□ -0.95
HSPG2-213ENST00000498495 SUN5Q8TC36 379 aa9.09□□□□□ -0.95
HSPG2-213ENST00000498495 ST6GAL2Q96JF0 529 aa9.09□□□□□ -0.95
HSPG2-213ENST00000498495 CTXND1A0A1B0GTU2 59 aa9.08□□□□□ -0.96
HSPG2-213ENST00000498495 KANTRA0A1W2PQU2 76 aa9.08□□□□□ -0.96
HSPG2-213ENST00000498495 CBY3A6NI87 242 aa9.08□□□□□ -0.96
HSPG2-213ENST00000498495 RGS13O14921 159 aa9.08□□□□□ -0.96
HSPG2-213ENST00000498495 SUMO1P63165 101 aaKnown RBP9.08□□□□□ -0.96
HSPG2-213ENST00000498495 GOLT1AQ6ZVE7 132 aa9.08□□□□□ -0.96
HSPG2-213ENST00000498495 EIF4E3Q8N5X7 224 aaKnown RBP9.08□□□□□ -0.96
HSPG2-213ENST00000498495 FAM210BQ96KR6 192 aa9.08□□□□□ -0.96
HSPG2-213ENST00000498495 LENEPQ9Y5L5 61 aa9.08□□□□□ -0.96
HSPG2-213ENST00000498495 SACSQ9NZJ4 4579 aa9.07□□□□□ -0.96
HSPG2-213ENST00000498495 PLECQ15149 4684 aaKnown RBP9.07□□□□□ -0.96
HSPG2-213ENST00000498495 GNG5P63218 68 aa9.07□□□□□ -0.96
HSPG2-213ENST00000498495 ZNF726P1Q15940 193 aa9.07□□□□□ -0.96
HSPG2-213ENST00000498495 PRR9Q5T870 116 aa9.07□□□□□ -0.96
HSPG2-213ENST00000498495 SSX7Q7RTT5 188 aa9.07□□□□□ -0.96
HSPG2-213ENST00000498495 TMED6Q8WW62 240 aa9.07□□□□□ -0.96
HSPG2-213ENST00000498495 LINC00467Q9BRT7 94 aa9.07□□□□□ -0.96
HSPG2-213ENST00000498495 ZNF471Q9BX82 626 aaPredicted RBP9.07□□□□□ -0.96
HSPG2-213ENST00000498495 RYR3Q15413 4870 aa9.06□□□□□ -0.96
HSPG2-213ENST00000498495 IGHV1OR15-1A0A075B7D0 117 aa9.06□□□□□ -0.96
HSPG2-213ENST00000498495 SERTM2A0A1B0GWG4 89 aa9.06□□□□□ -0.96
HSPG2-213ENST00000498495 F5H768 121 aa9.06□□□□□ -0.96
HSPG2-213ENST00000498495 K7EQM0 130 aa9.06□□□□□ -0.96
HSPG2-213ENST00000498495 ATP5G1P05496 136 aa9.06□□□□□ -0.96
HSPG2-213ENST00000498495 ATP5G3P48201 142 aa9.06□□□□□ -0.96
HSPG2-213ENST00000498495 EIF5AP63241 154 aaKnown RBP9.06□□□□□ -0.96
HSPG2-213ENST00000498495 ANXA2RQ3ZCQ2 193 aa9.06□□□□□ -0.96
HSPG2-213ENST00000498495 Q6ZNX1 250 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms