RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-208ENST00000498325 GGCTO75223 188 aaKnown RBP4.06□□□□□ -1.76
HMGXB4-208ENST00000498325 NDUFB4O95168 129 aa4.06□□□□□ -1.76
HMGXB4-208ENST00000498325 PRB2P02812 416 aaPredicted RBP4.06□□□□□ -1.76
HMGXB4-208ENST00000498325 HIST1H2BJP06899 126 aa4.06□□□□□ -1.76
HMGXB4-208ENST00000498325 OR10J4P0C629 311 aa4.06□□□□□ -1.76
HMGXB4-208ENST00000498325 PYYP10082 97 aa4.06□□□□□ -1.76
HMGXB4-208ENST00000498325 RPL7P18124 248 aaKnown RBP4.06□□□□□ -1.76
HMGXB4-208ENST00000498325 HIST1H2BOP23527 126 aa4.06□□□□□ -1.76
HMGXB4-208ENST00000498325 NPPCP23582 126 aa4.06□□□□□ -1.76
HMGXB4-208ENST00000498325 HIST1H2BBP33778 126 aa4.06□□□□□ -1.76
HMGXB4-208ENST00000498325 ARL3P36405 182 aa4.06□□□□□ -1.76
HMGXB4-208ENST00000498325 HIST1H2BDP58876 126 aa4.06□□□□□ -1.76
HMGXB4-208ENST00000498325 RPL15P61313 204 aaKnown RBP4.06□□□□□ -1.76
HMGXB4-208ENST00000498325 HIST1H2BCP62807 126 aa4.06□□□□□ -1.76
HMGXB4-208ENST00000498325 RANP62826 216 aaKnown RBP4.06□□□□□ -1.76
HMGXB4-208ENST00000498325 CFHR3Q02985 330 aa4.06□□□□□ -1.76
HMGXB4-208ENST00000498325 JOSD1Q15040 202 aaPredicted RBP4.06□□□□□ -1.76
HMGXB4-208ENST00000498325 USF2Q15853 346 aaPredicted RBP4.06□□□□□ -1.76
HMGXB4-208ENST00000498325 HIST2H2BEQ16778 126 aa4.06□□□□□ -1.76
HMGXB4-208ENST00000498325 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.06□□□□□ -1.76
HMGXB4-208ENST00000498325 ZNF343Q6P1L6 599 aa4.06□□□□□ -1.76
HMGXB4-208ENST00000498325 TOMM20LQ6UXN7 152 aa4.06□□□□□ -1.76
HMGXB4-208ENST00000498325 TMEM183AQ8IXX5 376 aa4.06□□□□□ -1.76
HMGXB4-208ENST00000498325 OR8I2Q8N0Y5 310 aa4.06□□□□□ -1.76
HMGXB4-208ENST00000498325 LYPD1Q8N2G4 141 aa4.06□□□□□ -1.76
HMGXB4-208ENST00000498325 OR4X2Q8NGF9 303 aa4.06□□□□□ -1.76
HMGXB4-208ENST00000498325 BLNKQ8WV28 456 aa4.06□□□□□ -1.76
HMGXB4-208ENST00000498325 HIST1H2BHQ93079 126 aa4.06□□□□□ -1.76
HMGXB4-208ENST00000498325 C11orf52Q96A22 123 aa4.06□□□□□ -1.76
HMGXB4-208ENST00000498325 FXYD5Q96DB9 178 aa4.06□□□□□ -1.76
HMGXB4-208ENST00000498325 FAM210BQ96KR6 192 aa4.06□□□□□ -1.76
HMGXB4-208ENST00000498325 GPR82Q96P67 336 aa4.06□□□□□ -1.76
HMGXB4-208ENST00000498325 METTL26Q96S19 204 aa4.06□□□□□ -1.76
HMGXB4-208ENST00000498325 HIST1H2BNQ99877 126 aa4.06□□□□□ -1.76
HMGXB4-208ENST00000498325 HIST1H2BMQ99879 126 aa4.06□□□□□ -1.76
HMGXB4-208ENST00000498325 C20orf24Q9BUV8 137 aa4.06□□□□□ -1.76
HMGXB4-208ENST00000498325 SRD5A3Q9H8P0 318 aa4.06□□□□□ -1.76
HMGXB4-208ENST00000498325 ZNF702PQ9H963 129 aa4.06□□□□□ -1.76
HMGXB4-208ENST00000498325 YTHDF2Q9Y5A9 579 aaKnown RBP4.06□□□□□ -1.76
HMGXB4-208ENST00000498325 TENM3Q9P273 2699 aa4.06□□□□□ -1.76
HMGXB4-208ENST00000498325 A0A1W2PS18 150 aa4.05□□□□□ -1.76
HMGXB4-208ENST00000498325 PGPA6NDG6 321 aa4.05□□□□□ -1.76
HMGXB4-208ENST00000498325 PPP5D1E7EU14 171 aa4.05□□□□□ -1.76
HMGXB4-208ENST00000498325 K7EQM0 130 aa4.05□□□□□ -1.76
HMGXB4-208ENST00000498325 NDUFA4O00483 81 aa4.05□□□□□ -1.76
HMGXB4-208ENST00000498325 IGHV3-11P01762 117 aa4.05□□□□□ -1.76
HMGXB4-208ENST00000498325 TRGC2P03986 189 aa4.05□□□□□ -1.76
HMGXB4-208ENST00000498325 SLC25A5P05141 298 aaKnown RBP4.05□□□□□ -1.76
HMGXB4-208ENST00000498325 TRGC1P0CF51 173 aa4.05□□□□□ -1.76
HMGXB4-208ENST00000498325 GP9P14770 177 aa4.05□□□□□ -1.76
HMGXB4-208ENST00000498325 CRYBB3P26998 211 aa4.05□□□□□ -1.76
HMGXB4-208ENST00000498325 PSMB8P28062 276 aa4.05□□□□□ -1.76
HMGXB4-208ENST00000498325 GALR1P47211 349 aa4.05□□□□□ -1.76
HMGXB4-208ENST00000498325 CNN1P51911 297 aaKnown RBP4.05□□□□□ -1.76
HMGXB4-208ENST00000498325 PSG9Q00887 426 aa4.05□□□□□ -1.76
HMGXB4-208ENST00000498325 PDE6HQ13956 83 aa4.05□□□□□ -1.76
HMGXB4-208ENST00000498325 ADIRFQ15847 76 aa4.05□□□□□ -1.76
HMGXB4-208ENST00000498325 FAM106AQ4KMX7 169 aa4.05□□□□□ -1.76
HMGXB4-208ENST00000498325 C1orf194Q5T5A4 169 aa4.05□□□□□ -1.76
HMGXB4-208ENST00000498325 LEMD1Q68G75 181 aa4.05□□□□□ -1.76
HMGXB4-208ENST00000498325 ZNF329Q86UD4 541 aa4.05□□□□□ -1.76
HMGXB4-208ENST00000498325 Q8N2B8 174 aa4.05□□□□□ -1.76
HMGXB4-208ENST00000498325 ARL6IP6Q8N6S5 226 aa4.05□□□□□ -1.76
HMGXB4-208ENST00000498325 C5orf17Q8NAS9 161 aa4.05□□□□□ -1.76
HMGXB4-208ENST00000498325 CMTM2Q8TAZ6 248 aa4.05□□□□□ -1.76
HMGXB4-208ENST00000498325 GRAMD2BQ96HH9 432 aa4.05□□□□□ -1.76
HMGXB4-208ENST00000498325 PACRGQ96M98 296 aaPredicted RBP4.05□□□□□ -1.76
HMGXB4-208ENST00000498325 PYGO2Q9BRQ0 406 aa4.05□□□□□ -1.76
HMGXB4-208ENST00000498325 NDUFAF3Q9BU61 184 aa4.05□□□□□ -1.76
HMGXB4-208ENST00000498325 GPR61Q9BZJ8 451 aa4.05□□□□□ -1.76
HMGXB4-208ENST00000498325 AAMDCQ9H7C9 122 aa4.05□□□□□ -1.76
HMGXB4-208ENST00000498325 OTORQ9NRC9 128 aa4.05□□□□□ -1.76
HMGXB4-208ENST00000498325 PEF1Q9UBV8 284 aaKnown RBP4.05□□□□□ -1.76
HMGXB4-208ENST00000498325 EPDR1Q9UM22 224 aa4.05□□□□□ -1.76
HMGXB4-208ENST00000498325 LY96Q9Y6Y9 160 aa4.05□□□□□ -1.76
HMGXB4-208ENST00000498325 TRBV19A0A075B6N1 114 aa4.04□□□□□ -1.76
HMGXB4-208ENST00000498325 IGKV2D-30A0A075B6S6 120 aa4.04□□□□□ -1.76
HMGXB4-208ENST00000498325 IGHV3-35A0A0C4DH35 117 aa4.04□□□□□ -1.76
HMGXB4-208ENST00000498325 ZNF785A8K8V0 405 aa4.04□□□□□ -1.76
HMGXB4-208ENST00000498325 A8MWP6 167 aa4.04□□□□□ -1.76
HMGXB4-208ENST00000498325 GGTLC3B5MD39 225 aa4.04□□□□□ -1.76
HMGXB4-208ENST00000498325 C9JCJ5 164 aa4.04□□□□□ -1.76
HMGXB4-208ENST00000498325 ZNF253O75346 499 aa4.04□□□□□ -1.76
HMGXB4-208ENST00000498325 CXCL1P09341 107 aa4.04□□□□□ -1.76
HMGXB4-208ENST00000498325 BMI1P35226 326 aa4.04□□□□□ -1.76
HMGXB4-208ENST00000498325 CSN1S1P47710 185 aa4.04□□□□□ -1.76
HMGXB4-208ENST00000498325 GNG4P50150 75 aa4.04□□□□□ -1.76
HMGXB4-208ENST00000498325 FAM3BP58499 235 aaPredicted RBP4.04□□□□□ -1.76
HMGXB4-208ENST00000498325 UBE2G1P62253 170 aa4.04□□□□□ -1.76
HMGXB4-208ENST00000498325 RPL23P62829 140 aaKnown RBP4.04□□□□□ -1.76
HMGXB4-208ENST00000498325 IQCJQ1A5X6 159 aa4.04□□□□□ -1.76
HMGXB4-208ENST00000498325 KRTAP5-1Q6L8H4 278 aa4.04□□□□□ -1.76
HMGXB4-208ENST00000498325 RNF152Q8N8N0 203 aa4.04□□□□□ -1.76
HMGXB4-208ENST00000498325 ZNF414Q96IQ9 312 aa4.04□□□□□ -1.76
HMGXB4-208ENST00000498325 UBE2E2Q96LR5 201 aa4.04□□□□□ -1.76
HMGXB4-208ENST00000498325 DUX5Q96PT3 197 aa4.04□□□□□ -1.76
HMGXB4-208ENST00000498325 OR5B12Q96R08 314 aa4.04□□□□□ -1.76
HMGXB4-208ENST00000498325 HIST1H2BLQ99880 126 aa4.04□□□□□ -1.76
HMGXB4-208ENST00000498325 ELOVL1Q9BW60 279 aa4.04□□□□□ -1.76
HMGXB4-208ENST00000498325 Q9H3A6 140 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 113.2 ms