RNA–Protein interactions for RNA: ENST00000498058.1

PRKCB-209, Transcript of protein kinase C beta, humanhuman

TSL 3 BASIC

Gene PRKCB, Length 480 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-209ENST00000498058 MORN5Q5VZ52 161 aa13.14□□□□□ -0.31
PRKCB-209ENST00000498058 IGFL4Q6B9Z1 124 aa13.14□□□□□ -0.31
PRKCB-209ENST00000498058 TEX261Q6UWH6 196 aa13.14□□□□□ -0.31
PRKCB-209ENST00000498058 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.14□□□□□ -0.31
PRKCB-209ENST00000498058 Q6ZR54 194 aa13.14□□□□□ -0.31
PRKCB-209ENST00000498058 LRRC20Q8TCA0 184 aa13.14□□□□□ -0.31
PRKCB-209ENST00000498058 PAXXQ9BUH6 204 aa13.14□□□□□ -0.31
PRKCB-209ENST00000498058 YTHDF2Q9Y5A9 579 aaKnown RBP13.14□□□□□ -0.31
PRKCB-209ENST00000498058 RYR1P21817 5038 aa13.14□□□□□ -0.31
PRKCB-209ENST00000498058 STAG3L2P0CL84 134 aa13.13□□□□□ -0.31
PRKCB-209ENST00000498058 STAG3L3P0CL85 134 aa13.13□□□□□ -0.31
PRKCB-209ENST00000498058 FAM167A-AS1Q96KT0 104 aa13.13□□□□□ -0.31
PRKCB-209ENST00000498058 MUC4Q99102 2169 aa13.13□□□□□ -0.31
PRKCB-209ENST00000498058 A0A087X0K7 114 aa13.12□□□□□ -0.31
PRKCB-209ENST00000498058 TRAV8-2A0A0B4J237 113 aa13.12□□□□□ -0.31
PRKCB-209ENST00000498058 LOC102723971A0A1B0GUV8 181 aa13.12□□□□□ -0.31
PRKCB-209ENST00000498058 MAP1LC3B2A6NCE7 125 aa13.12□□□□□ -0.31
PRKCB-209ENST00000498058 H2AFB1P0C5Y9 115 aa13.12□□□□□ -0.31
PRKCB-209ENST00000498058 HIST1H1EP10412 219 aaKnown RBP13.12□□□□□ -0.31
PRKCB-209ENST00000498058 HTN3P15516 51 aa13.12□□□□□ -0.31
PRKCB-209ENST00000498058 UBE2L3P68036 154 aaKnown RBP13.12□□□□□ -0.31
PRKCB-209ENST00000498058 BLOC1S1P78537 153 aa13.12□□□□□ -0.31
PRKCB-209ENST00000498058 FAM74A1Q5RGS3 127 aa13.12□□□□□ -0.31
PRKCB-209ENST00000498058 EBLN2Q6P2I7 272 aa13.12□□□□□ -0.31
PRKCB-209ENST00000498058 LCN15Q6UWW0 184 aa13.12□□□□□ -0.31
PRKCB-209ENST00000498058 C16orf92Q96LL3 132 aa13.12□□□□□ -0.31
PRKCB-209ENST00000498058 MAP1LC3BQ9GZQ8 125 aa13.12□□□□□ -0.31
PRKCB-209ENST00000498058 GOLT1BQ9Y3E0 138 aa13.12□□□□□ -0.31
PRKCB-209ENST00000498058 MRPS12O15235 138 aaKnown RBP13.11□□□□□ -0.31
PRKCB-209ENST00000498058 CRXO43186 299 aaPredicted RBP13.11□□□□□ -0.31
PRKCB-209ENST00000498058 HBE1P02100 147 aa13.11□□□□□ -0.31
PRKCB-209ENST00000498058 ARL14EPLP0DKL9 152 aa13.11□□□□□ -0.31
PRKCB-209ENST00000498058 FHITP49789 147 aa13.11□□□□□ -0.31
PRKCB-209ENST00000498058 ZNF726P1Q15940 193 aa13.11□□□□□ -0.31
PRKCB-209ENST00000498058 ZNF680Q8NEM1 530 aa13.11□□□□□ -0.31
PRKCB-209ENST00000498058 SFT2D1Q8WV19 159 aa13.11□□□□□ -0.31
PRKCB-209ENST00000498058 MBD3L1Q8WWY6 194 aa13.11□□□□□ -0.31
PRKCB-209ENST00000498058 TMEM167BQ9NRX6 74 aa13.11□□□□□ -0.31
PRKCB-209ENST00000498058 HMGB3O15347 200 aaKnown RBP13.1□□□□□ -0.31
PRKCB-209ENST00000498058 IGLC2P0DOY2 106 aa13.1□□□□□ -0.31
PRKCB-209ENST00000498058 PYYP10082 97 aa13.1□□□□□ -0.31
PRKCB-209ENST00000498058 PDE6HQ13956 83 aa13.1□□□□□ -0.31
PRKCB-209ENST00000498058 IQCF2Q8IXL9 164 aa13.1□□□□□ -0.31
PRKCB-209ENST00000498058 SAT2Q96F10 170 aaPredicted RBP13.1□□□□□ -0.31
PRKCB-209ENST00000498058 FAM210BQ96KR6 192 aa13.1□□□□□ -0.31
PRKCB-209ENST00000498058 ZNF253O75346 499 aa13.09□□□□□ -0.31
PRKCB-209ENST00000498058 NBEAP1P0C6P0 100 aa13.09□□□□□ -0.31
PRKCB-209ENST00000498058 GCHFRP30047 84 aa13.09□□□□□ -0.31
PRKCB-209ENST00000498058 RRN3P1Q2M238 152 aa13.09□□□□□ -0.31
PRKCB-209ENST00000498058 TMEM88Q6PEY1 159 aa13.09□□□□□ -0.31
PRKCB-209ENST00000498058 UBE2DNLQ8IWF7 75 aa13.09□□□□□ -0.31
PRKCB-209ENST00000498058 RNF182Q8N6D2 247 aa13.09□□□□□ -0.31
PRKCB-209ENST00000498058 IGF2BP2-AS1Q96M15 143 aa13.09□□□□□ -0.31
PRKCB-209ENST00000498058 SLC50A1Q9BRV3 221 aa13.09□□□□□ -0.31
PRKCB-209ENST00000498058 TRAV1-1A0A0B4J248 108 aa13.08□□□□□ -0.32
PRKCB-209ENST00000498058 TEX48A0A1B0GUV7 120 aa13.08□□□□□ -0.32
PRKCB-209ENST00000498058 ZNF705GA8MUZ8 300 aaPredicted RBP13.08□□□□□ -0.32
PRKCB-209ENST00000498058 M0R2Z0 102 aa13.08□□□□□ -0.32
PRKCB-209ENST00000498058 OR10J4P0C629 311 aa13.08□□□□□ -0.32
PRKCB-209ENST00000498058 PRB4P10163 310 aaPredicted RBP13.08□□□□□ -0.32
PRKCB-209ENST00000498058 PPT1P50897 306 aa13.08□□□□□ -0.32
PRKCB-209ENST00000498058 CNN1P51911 297 aaKnown RBP13.08□□□□□ -0.32
PRKCB-209ENST00000498058 SPINK13Q1W4C9 94 aa13.08□□□□□ -0.32
PRKCB-209ENST00000498058 SSX7Q7RTT5 188 aa13.08□□□□□ -0.32
PRKCB-209ENST00000498058 FXYD5Q96DB9 178 aa13.08□□□□□ -0.32
PRKCB-209ENST00000498058 TRBV19A0A075B6N1 114 aa13.07□□□□□ -0.32
PRKCB-209ENST00000498058 H3BQ15 152 aa13.07□□□□□ -0.32
PRKCB-209ENST00000498058 MED14OSP0DP75 135 aa13.07□□□□□ -0.32
PRKCB-209ENST00000498058 FGF8P55075 233 aaPredicted RBP13.07□□□□□ -0.32
PRKCB-209ENST00000498058 BLNKQ8WV28 456 aa13.07□□□□□ -0.32
PRKCB-209ENST00000498058 ZNF503Q96F45 646 aa13.07□□□□□ -0.32
PRKCB-209ENST00000498058 AAMDCQ9H7C9 122 aa13.07□□□□□ -0.32
PRKCB-209ENST00000498058 ZNF586Q9NXT0 402 aa13.07□□□□□ -0.32
PRKCB-209ENST00000498058 ABCA13Q86UQ4 5058 aa13.07□□□□□ -0.32
PRKCB-209ENST00000498058 PLAC8L1A1L4L8 177 aa13.06□□□□□ -0.32
PRKCB-209ENST00000498058 EIF3GO75821 320 aaKnown RBP eCLIP13.06□□□□□ -0.32
PRKCB-209ENST00000498058 AZU1P20160 251 aa13.06□□□□□ -0.32
PRKCB-209ENST00000498058 RAB14P61106 215 aa13.06□□□□□ -0.32
PRKCB-209ENST00000498058 DAD1P61803 113 aa13.06□□□□□ -0.32
PRKCB-209ENST00000498058 RNF212Q495C1 297 aa13.06□□□□□ -0.32
PRKCB-209ENST00000498058 LYPD1Q8N2G4 141 aa13.06□□□□□ -0.32
PRKCB-209ENST00000498058 SUN5Q8TC36 379 aa13.05□□□□□ -0.32
PRKCB-209ENST00000498058 TRAV12-2A0A075B6T6 113 aa13.04□□□□□ -0.32
PRKCB-209ENST00000498058 IFNA1P01562 189 aa13.04□□□□□ -0.32
PRKCB-209ENST00000498058 ZNF575Q86XF7 245 aa13.04□□□□□ -0.32
PRKCB-209ENST00000498058 TMEM208Q9BTX3 173 aa13.04□□□□□ -0.32
PRKCB-209ENST00000498058 NKX6-2Q9C056 277 aaPredicted RBP13.04□□□□□ -0.32
PRKCB-209ENST00000498058 ZNF331Q9NQX6 463 aaPredicted RBP13.04□□□□□ -0.32
PRKCB-209ENST00000498058 PRELID1Q9Y255 219 aa13.04□□□□□ -0.32
PRKCB-209ENST00000498058 ARL2-SNX15V9GYD0 113 aa13.04□□□□□ -0.32
PRKCB-209ENST00000498058 A0A1B0GV50 99 aa13.03□□□□□ -0.32
PRKCB-209ENST00000498058 H3BTX0 84 aa13.03□□□□□ -0.32
PRKCB-209ENST00000498058 SNRPCP09234 159 aaKnown RBP13.03□□□□□ -0.32
PRKCB-209ENST00000498058 KRTAP4-5Q9BYR2 181 aa13.03□□□□□ -0.32
PRKCB-209ENST00000498058 MANBALQ9NQG1 85 aa13.03□□□□□ -0.32
PRKCB-209ENST00000498058 OTORQ9NRC9 128 aa13.03□□□□□ -0.32
PRKCB-209ENST00000498058 A0A1W2PRE2 83 aa13.02□□□□□ -0.33
PRKCB-209ENST00000498058 SLC17A3O00476 420 aa13.02□□□□□ -0.33
PRKCB-209ENST00000498058 DUSP14O95147 198 aaKnown RBP13.02□□□□□ -0.33
PRKCB-209ENST00000498058 INSP01308 110 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms