RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 FAM210AQ96ND0 272 aa9.99□□□□□ -0.81
CPNE1-227ENST00000498056 ASCL2Q99929 193 aa9.99□□□□□ -0.81
CPNE1-227ENST00000498056 SLC35B3Q9H1N7 401 aa9.99□□□□□ -0.81
CPNE1-227ENST00000498056 RBAKDNA6NC62 111 aa9.98□□□□□ -0.81
CPNE1-227ENST00000498056 M0R2Z0 102 aa9.98□□□□□ -0.81
CPNE1-227ENST00000498056 RGS13O14921 159 aa9.98□□□□□ -0.81
CPNE1-227ENST00000498056 NUTF2P61970 127 aaKnown RBP9.98□□□□□ -0.81
CPNE1-227ENST00000498056 UBE2G1P62253 170 aa9.98□□□□□ -0.81
CPNE1-227ENST00000498056 SPINK13Q1W4C9 94 aa9.98□□□□□ -0.81
CPNE1-227ENST00000498056 CCDC28AQ8IWP9 274 aa9.98□□□□□ -0.81
CPNE1-227ENST00000498056 TMEM75Q8N9X5 138 aa9.98□□□□□ -0.81
CPNE1-227ENST00000498056 RARRES2Q99969 163 aa9.98□□□□□ -0.81
CPNE1-227ENST00000498056 TXNDC17Q9BRA2 123 aa9.98□□□□□ -0.81
CPNE1-227ENST00000498056 TRAV34A0A0B4J273 112 aa9.97□□□□□ -0.81
CPNE1-227ENST00000498056 A8MZ25 164 aa9.97□□□□□ -0.81
CPNE1-227ENST00000498056 PDE6DO43924 150 aa9.97□□□□□ -0.81
CPNE1-227ENST00000498056 CEBPGP53567 150 aa9.97□□□□□ -0.81
CPNE1-227ENST00000498056 PMS2P11Q13670 270 aa9.97□□□□□ -0.81
CPNE1-227ENST00000498056 ZNF506Q5JVG8 444 aa9.97□□□□□ -0.81
CPNE1-227ENST00000498056 MORN3Q6PF18 240 aaPredicted RBP9.97□□□□□ -0.81
CPNE1-227ENST00000498056 C9orf47Q6ZRZ4 202 aa9.97□□□□□ -0.81
CPNE1-227ENST00000498056 PRNTQ86SH4 94 aa9.97□□□□□ -0.81
CPNE1-227ENST00000498056 Q86TA4 180 aa9.97□□□□□ -0.81
CPNE1-227ENST00000498056 ARL6IP6Q8N6S5 226 aa9.97□□□□□ -0.81
CPNE1-227ENST00000498056 NDFIP1Q9BT67 221 aa9.97□□□□□ -0.81
CPNE1-227ENST00000498056 AGPAT4-IT1Q9H0P7 198 aa9.97□□□□□ -0.81
CPNE1-227ENST00000498056 TRAV12-2A0A075B6T6 113 aa9.96□□□□□ -0.82
CPNE1-227ENST00000498056 A8MTW9 85 aa9.96□□□□□ -0.82
CPNE1-227ENST00000498056 CT45A10P0DMU9 189 aa9.96□□□□□ -0.82
CPNE1-227ENST00000498056 LEPP41159 167 aa9.96□□□□□ -0.82
CPNE1-227ENST00000498056 ZNF138P52744 262 aa9.96□□□□□ -0.82
CPNE1-227ENST00000498056 FLI1Q01543 452 aaPredicted RBP9.96□□□□□ -0.82
CPNE1-227ENST00000498056 AMTNQ6UX39 209 aa9.96□□□□□ -0.82
CPNE1-227ENST00000498056 C11orf52Q96A22 123 aa9.96□□□□□ -0.82
CPNE1-227ENST00000498056 LINC00479Q96M42 142 aa9.96□□□□□ -0.82
CPNE1-227ENST00000498056 XCL2Q9UBD3 114 aa9.96□□□□□ -0.82
CPNE1-227ENST00000498056 KIR2DL5BA0A0G2JN68 375 aa9.95□□□□□ -0.82
CPNE1-227ENST00000498056 KIR2DL5BA0A0G2JPC4 375 aa9.95□□□□□ -0.82
CPNE1-227ENST00000498056 INSP01308 110 aa9.95□□□□□ -0.82
CPNE1-227ENST00000498056 DEFB135Q30KP9 77 aa9.95□□□□□ -0.82
CPNE1-227ENST00000498056 KIR2DL5AQ8N109 375 aa9.95□□□□□ -0.82
CPNE1-227ENST00000498056 KIR2DL5BQ8NHK3 375 aa9.95□□□□□ -0.82
CPNE1-227ENST00000498056 C2CD4CQ8TF44 421 aa9.95□□□□□ -0.82
CPNE1-227ENST00000498056 FMC1Q96HJ9 113 aa9.95□□□□□ -0.82
CPNE1-227ENST00000498056 LINC00477Q96M19 166 aa9.95□□□□□ -0.82
CPNE1-227ENST00000498056 CLUHP3Q96NS8 147 aa9.95□□□□□ -0.82
CPNE1-227ENST00000498056 ODF3Q96PU9 254 aa9.95□□□□□ -0.82
CPNE1-227ENST00000498056 DERL1Q9BUN8 251 aa9.95□□□□□ -0.82
CPNE1-227ENST00000498056 CSTL1Q9H114 145 aa9.95□□□□□ -0.82
CPNE1-227ENST00000498056 MED9Q9NWA0 146 aa9.95□□□□□ -0.82
CPNE1-227ENST00000498056 ZNF492Q9P255 531 aa9.95□□□□□ -0.82
CPNE1-227ENST00000498056 PSG8Q9UQ74 426 aa9.95□□□□□ -0.82
CPNE1-227ENST00000498056 TSPOP30536 169 aa9.94□□□□□ -0.82
CPNE1-227ENST00000498056 CDKN1BP46527 198 aa9.94□□□□□ -0.82
CPNE1-227ENST00000498056 LINC00322Q6ZN03 302 aaPredicted RBP9.94□□□□□ -0.82
CPNE1-227ENST00000498056 C1QTNF4Q9BXJ3 329 aa9.94□□□□□ -0.82
CPNE1-227ENST00000498056 FBLL1A6NHQ2 334 aaKnown RBP9.93□□□□□ -0.82
CPNE1-227ENST00000498056 IGLV2-11P01706 119 aa9.93□□□□□ -0.82
CPNE1-227ENST00000498056 AMBPP02760 352 aa9.93□□□□□ -0.82
CPNE1-227ENST00000498056 RPL35P42766 123 aaKnown RBP9.93□□□□□ -0.82
CPNE1-227ENST00000498056 BTN1A1Q13410 526 aa9.93□□□□□ -0.82
CPNE1-227ENST00000498056 TMEM183BQ1AE95 376 aa9.93□□□□□ -0.82
CPNE1-227ENST00000498056 ZNF674Q2M3X9 581 aa9.93□□□□□ -0.82
CPNE1-227ENST00000498056 GFI1BQ5VTD9 330 aa9.93□□□□□ -0.82
CPNE1-227ENST00000498056 RETNQ9HD89 108 aa9.93□□□□□ -0.82
CPNE1-227ENST00000498056 TREM1Q9NP99 234 aa9.93□□□□□ -0.82
CPNE1-227ENST00000498056 PRKDCP78527 4128 aaKnown RBP9.92□□□□□ -0.82
CPNE1-227ENST00000498056 IGHV3OR16-12A0A075B7B8 117 aa9.92□□□□□ -0.82
CPNE1-227ENST00000498056 GPX1P07203 203 aa9.92□□□□□ -0.82
CPNE1-227ENST00000498056 CRISP2P16562 243 aa9.92□□□□□ -0.82
CPNE1-227ENST00000498056 SRSF3P84103 164 aaKnown RBP9.92□□□□□ -0.82
CPNE1-227ENST00000498056 KIR3DS1Q14943 382 aa9.92□□□□□ -0.82
CPNE1-227ENST00000498056 PEA15Q15121 130 aa9.92□□□□□ -0.82
CPNE1-227ENST00000498056 CENPWQ5EE01 88 aa9.92□□□□□ -0.82
CPNE1-227ENST00000498056 PRR9Q5T870 116 aa9.92□□□□□ -0.82
CPNE1-227ENST00000498056 COMMD7Q86VX2 200 aa9.92□□□□□ -0.82
CPNE1-227ENST00000498056 SBSPONQ8IVN8 264 aa9.92□□□□□ -0.82
CPNE1-227ENST00000498056 NHLRC2Q8NBF2 726 aa9.92□□□□□ -0.82
CPNE1-227ENST00000498056 FAM19A4Q96LR4 140 aa9.92□□□□□ -0.82
CPNE1-227ENST00000498056 C8orf49Q96NF6 230 aa9.92□□□□□ -0.82
CPNE1-227ENST00000498056 MEGF8Q7Z7M0 2845 aa9.92□□□□□ -0.82
CPNE1-227ENST00000498056 C7orf71A4D174 169 aa9.91□□□□□ -0.82
CPNE1-227ENST00000498056 TMEM250H0YL14 139 aa9.91□□□□□ -0.82
CPNE1-227ENST00000498056 S100A9P06702 114 aaKnown RBP9.91□□□□□ -0.82
CPNE1-227ENST00000498056 GIG44P09565 113 aaPredicted RBP9.91□□□□□ -0.82
CPNE1-227ENST00000498056 ZFAND2AQ8N6M9 145 aa9.91□□□□□ -0.82
CPNE1-227ENST00000498056 TVP23CQ96ET8 276 aa9.91□□□□□ -0.82
CPNE1-227ENST00000498056 IGF2BP2-AS1Q96M15 143 aa9.91□□□□□ -0.82
CPNE1-227ENST00000498056 B9D2Q9BPU9 175 aa9.91□□□□□ -0.82
CPNE1-227ENST00000498056 TMEM208Q9BTX3 173 aa9.91□□□□□ -0.82
CPNE1-227ENST00000498056 PARLQ9H300 379 aa9.91□□□□□ -0.82
CPNE1-227ENST00000498056 LENEPQ9Y5L5 61 aa9.91□□□□□ -0.82
CPNE1-227ENST00000498056 TRAV12-3A0A0B4J271 114 aa9.9□□□□□ -0.82
CPNE1-227ENST00000498056 TRBV7-9A0A0J9YWB2 115 aa9.9□□□□□ -0.82
CPNE1-227ENST00000498056 KLLNB2CW77 178 aa9.9□□□□□ -0.82
CPNE1-227ENST00000498056 UBE2CO00762 179 aa9.9□□□□□ -0.82
CPNE1-227ENST00000498056 CRXO43186 299 aaPredicted RBP9.9□□□□□ -0.82
CPNE1-227ENST00000498056 LTAP01374 205 aa9.9□□□□□ -0.82
CPNE1-227ENST00000498056 SRP19P09132 144 aaKnown RBP9.9□□□□□ -0.82
CPNE1-227ENST00000498056 RNASE4P34096 147 aaKnown RBP9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms