RNA–Protein interactions for RNA: ENST00000497977.1

PTPRN-218, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 3

Gene PTPRN, Length 701 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-218ENST00000497977 ZNF705DP0CH99 300 aaPredicted RBP7.53□□□□□ -1.2
PTPRN-218ENST00000497977 ZNF705BP0CI00 300 aaPredicted RBP7.53□□□□□ -1.2
PTPRN-218ENST00000497977 STAG3L2P0CL84 134 aa7.53□□□□□ -1.2
PTPRN-218ENST00000497977 STAG3L3P0CL85 134 aa7.53□□□□□ -1.2
PTPRN-218ENST00000497977 GCHFRP30047 84 aa7.53□□□□□ -1.2
PTPRN-218ENST00000497977 UBE2G2P60604 165 aa7.53□□□□□ -1.2
PTPRN-218ENST00000497977 ZNF493Q6ZR52 646 aa7.53□□□□□ -1.2
PTPRN-218ENST00000497977 ARL6IP6Q8N6S5 226 aa7.53□□□□□ -1.2
PTPRN-218ENST00000497977 Q8NAQ8 132 aa7.53□□□□□ -1.2
PTPRN-218ENST00000497977 CMTM2Q8TAZ6 248 aa7.53□□□□□ -1.2
PTPRN-218ENST00000497977 ODF3Q96PU9 254 aa7.53□□□□□ -1.2
PTPRN-218ENST00000497977 NIPSNAP3BQ9BS92 247 aa7.53□□□□□ -1.2
PTPRN-218ENST00000497977 TMPRSS5Q9H3S3 457 aa7.53□□□□□ -1.2
PTPRN-218ENST00000497977 DEFB4AO15263 64 aa7.52□□□□□ -1.21
PTPRN-218ENST00000497977 CXorf1O96002 111 aa7.52□□□□□ -1.21
PTPRN-218ENST00000497977 TAS2R60P59551 318 aa7.52□□□□□ -1.21
PTPRN-218ENST00000497977 RANP62826 216 aaKnown RBP7.52□□□□□ -1.21
PTPRN-218ENST00000497977 SPINK13Q1W4C9 94 aa7.52□□□□□ -1.21
PTPRN-218ENST00000497977 EXOC3-AS1Q8N2X6 119 aa7.52□□□□□ -1.21
PTPRN-218ENST00000497977 SFT2D1Q8WV19 159 aa7.52□□□□□ -1.21
PTPRN-218ENST00000497977 RYR3Q15413 4870 aa7.52□□□□□ -1.21
PTPRN-218ENST00000497977 TRBV7-9A0A0J9YWB2 115 aa7.51□□□□□ -1.21
PTPRN-218ENST00000497977 LCE6AA0A183 80 aa7.51□□□□□ -1.21
PTPRN-218ENST00000497977 LOC102723971A0A1B0GUV8 181 aa7.51□□□□□ -1.21
PTPRN-218ENST00000497977 K7EQM0 130 aa7.51□□□□□ -1.21
PTPRN-218ENST00000497977 M0R3E3 92 aa7.51□□□□□ -1.21
PTPRN-218ENST00000497977 SLC25A5P05141 298 aaKnown RBP7.51□□□□□ -1.21
PTPRN-218ENST00000497977 RBMY1A1P0DJD3 496 aaKnown RBP7.51□□□□□ -1.21
PTPRN-218ENST00000497977 RBMY1CP0DJD4 496 aa7.51□□□□□ -1.21
PTPRN-218ENST00000497977 SULT1A2P50226 295 aa7.51□□□□□ -1.21
PTPRN-218ENST00000497977 EMP1P54849 157 aa7.51□□□□□ -1.21
PTPRN-218ENST00000497977 NANOS2P60321 138 aaKnown RBP7.51□□□□□ -1.21
PTPRN-218ENST00000497977 ICAM4Q14773 271 aa7.51□□□□□ -1.21
PTPRN-218ENST00000497977 RBMY1FQ15415 496 aaKnown RBP7.51□□□□□ -1.21
PTPRN-218ENST00000497977 AMTNQ6UX39 209 aa7.51□□□□□ -1.21
PTPRN-218ENST00000497977 DPPA3Q6W0C5 159 aa7.51□□□□□ -1.21
PTPRN-218ENST00000497977 PCNPQ8WW12 178 aaKnown RBP7.51□□□□□ -1.21
PTPRN-218ENST00000497977 FAM210BQ96KR6 192 aa7.51□□□□□ -1.21
PTPRN-218ENST00000497977 Q9H3A6 140 aa7.51□□□□□ -1.21
PTPRN-218ENST00000497977 LYRM9A8MSI8 78 aa7.5□□□□□ -1.21
PTPRN-218ENST00000497977 M0R2Z0 102 aa7.5□□□□□ -1.21
PTPRN-218ENST00000497977 NDUFB4O95168 129 aa7.5□□□□□ -1.21
PTPRN-218ENST00000497977 GPX1P07203 203 aa7.5□□□□□ -1.21
PTPRN-218ENST00000497977 H2AFB1P0C5Y9 115 aa7.5□□□□□ -1.21
PTPRN-218ENST00000497977 HTN1P15515 57 aa7.5□□□□□ -1.21
PTPRN-218ENST00000497977 C16orf74Q96GX8 76 aa7.5□□□□□ -1.21
PTPRN-218ENST00000497977 PYGO2Q9BRQ0 406 aa7.5□□□□□ -1.21
PTPRN-218ENST00000497977 TMEM167BQ9NRX6 74 aa7.5□□□□□ -1.21
PTPRN-218ENST00000497977 AGRNO00468 2067 aa7.49□□□□□ -1.21
PTPRN-218ENST00000497977 IGKV2-40A0A087WW87 121 aaPredicted RBP7.49□□□□□ -1.21
PTPRN-218ENST00000497977 DEFB131BA0A096LNP1 70 aa7.49□□□□□ -1.21
PTPRN-218ENST00000497977 SERTM2A0A1B0GWG4 89 aa7.49□□□□□ -1.21
PTPRN-218ENST00000497977 RBAKDNA6NC62 111 aa7.49□□□□□ -1.21
PTPRN-218ENST00000497977 IGLL5B9A064 214 aa7.49□□□□□ -1.21
PTPRN-218ENST00000497977 NPIPB6E9PJ23 425 aa7.49□□□□□ -1.21
PTPRN-218ENST00000497977 IGKV2D-40P01614 121 aaPredicted RBP7.49□□□□□ -1.21
PTPRN-218ENST00000497977 RAB5CP51148 216 aa7.49□□□□□ -1.21
PTPRN-218ENST00000497977 GNG5P63218 68 aa7.49□□□□□ -1.21
PTPRN-218ENST00000497977 C9orf47Q6ZRZ4 202 aa7.49□□□□□ -1.21
PTPRN-218ENST00000497977 C1orf158Q8N1D5 194 aa7.49□□□□□ -1.21
PTPRN-218ENST00000497977 NKX6-2Q9C056 277 aaPredicted RBP7.49□□□□□ -1.21
PTPRN-218ENST00000497977 GNG13Q9P2W3 67 aa7.49□□□□□ -1.21
PTPRN-218ENST00000497977 YTHDF2Q9Y5A9 579 aaKnown RBP7.49□□□□□ -1.21
PTPRN-218ENST00000497977 TIMM8BQ9Y5J9 83 aaPredicted RBP7.49□□□□□ -1.21
PTPRN-218ENST00000497977 LENEPQ9Y5L5 61 aa7.49□□□□□ -1.21
PTPRN-218ENST00000497977 TRAV12-2A0A075B6T6 113 aa7.48□□□□□ -1.21
PTPRN-218ENST00000497977 PGPA6NDG6 321 aa7.48□□□□□ -1.21
PTPRN-218ENST00000497977 FBLL1A6NHQ2 334 aaKnown RBP7.48□□□□□ -1.21
PTPRN-218ENST00000497977 SNURFLB1AK76 121 aa7.48□□□□□ -1.21
PTPRN-218ENST00000497977 GGTLC3B5MD39 225 aa7.48□□□□□ -1.21
PTPRN-218ENST00000497977 PRAC2D3DTV9 90 aa7.48□□□□□ -1.21
PTPRN-218ENST00000497977 TEX46H3BTG2 121 aa7.48□□□□□ -1.21
PTPRN-218ENST00000497977 ZNF138P52744 262 aa7.48□□□□□ -1.21
PTPRN-218ENST00000497977 DAD1P61803 113 aa7.48□□□□□ -1.21
PTPRN-218ENST00000497977 CST9LP1Q5W188 147 aa7.48□□□□□ -1.21
PTPRN-218ENST00000497977 OTORQ9NRC9 128 aa7.48□□□□□ -1.21
PTPRN-218ENST00000497977 DKK2Q9UBU2 259 aa7.48□□□□□ -1.21
PTPRN-218ENST00000497977 J3KRW8 73 aa7.47□□□□□ -1.21
PTPRN-218ENST00000497977 CRXO43186 299 aaPredicted RBP7.47□□□□□ -1.21
PTPRN-218ENST00000497977 LY6G6CO95867 125 aa7.47□□□□□ -1.21
PTPRN-218ENST00000497977 IFNA7P01567 189 aa7.47□□□□□ -1.21
PTPRN-218ENST00000497977 CT45A10P0DMU9 189 aa7.47□□□□□ -1.21
PTPRN-218ENST00000497977 ATP5G3P48201 142 aa7.47□□□□□ -1.21
PTPRN-218ENST00000497977 ERCC8Q13216 396 aa7.47□□□□□ -1.21
PTPRN-218ENST00000497977 FAM222AQ5U5X8 452 aa7.47□□□□□ -1.21
PTPRN-218ENST00000497977 LGALS9CQ6DKI2 356 aa7.47□□□□□ -1.21
PTPRN-218ENST00000497977 TEX261Q6UWH6 196 aa7.47□□□□□ -1.21
PTPRN-218ENST00000497977 ZNF680Q8NEM1 530 aa7.47□□□□□ -1.21
PTPRN-218ENST00000497977 Q8TAT8 98 aa7.47□□□□□ -1.21
PTPRN-218ENST00000497977 NDFIP1Q9BT67 221 aa7.47□□□□□ -1.21
PTPRN-218ENST00000497977 NDUFAF3Q9BU61 184 aa7.47□□□□□ -1.21
PTPRN-218ENST00000497977 AGPAT4-IT1Q9H0P7 198 aa7.47□□□□□ -1.21
PTPRN-218ENST00000497977 HUWE1Q7Z6Z7 4374 aaKnown RBP7.47□□□□□ -1.21
PTPRN-218ENST00000497977 TRAV12-3A0A0B4J271 114 aa7.46□□□□□ -1.22
PTPRN-218ENST00000497977 CBY3A6NI87 242 aa7.46□□□□□ -1.22
PTPRN-218ENST00000497977 FAM74A7A6NL05 159 aa7.46□□□□□ -1.22
PTPRN-218ENST00000497977 ZNF705GA8MUZ8 300 aaPredicted RBP7.46□□□□□ -1.22
PTPRN-218ENST00000497977 PAGE4O60829 102 aa7.46□□□□□ -1.22
PTPRN-218ENST00000497977 CRISP2P16562 243 aa7.46□□□□□ -1.22
PTPRN-218ENST00000497977 CCL20P78556 96 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms