RNA–Protein interactions for RNA: ENST00000497149.1

VPS36-206, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-206ENST00000497149 ZNF736B4DX44 427 aaPredicted RBP1.89□□□□□ -2.11
VPS36-206ENST00000497149 LYRM1O43325 122 aa1.89□□□□□ -2.11
VPS36-206ENST00000497149 HYPMO75409 117 aa1.89□□□□□ -2.11
VPS36-206ENST00000497149 NPYP01303 97 aa1.89□□□□□ -2.11
VPS36-206ENST00000497149 IGHV3-7P01780 117 aa1.89□□□□□ -2.11
VPS36-206ENST00000497149 CTSDP07339 412 aaPredicted RBP1.89□□□□□ -2.11
VPS36-206ENST00000497149 TRAPPC2P0DI81 140 aa1.89□□□□□ -2.11
VPS36-206ENST00000497149 TRAPPC2BP0DI82 140 aa1.89□□□□□ -2.11
VPS36-206ENST00000497149 CRYGAP11844 174 aa1.89□□□□□ -2.11
VPS36-206ENST00000497149 HLA-DMBP28068 263 aa1.89□□□□□ -2.11
VPS36-206ENST00000497149 KLRD1Q13241 179 aa1.89□□□□□ -2.11
VPS36-206ENST00000497149 C9orf153Q5TBE3 101 aa1.89□□□□□ -2.11
VPS36-206ENST00000497149 FAM216BQ8N7L0 139 aa1.89□□□□□ -2.11
VPS36-206ENST00000497149 OR5AK2Q8NH90 309 aa1.89□□□□□ -2.11
VPS36-206ENST00000497149 RNASE6Q93091 150 aaKnown RBP1.89□□□□□ -2.11
VPS36-206ENST00000497149 DIRC1Q969H9 104 aa1.89□□□□□ -2.11
VPS36-206ENST00000497149 C11orf1Q9H5F2 150 aa1.89□□□□□ -2.11
VPS36-206ENST00000497149 TMEM106BQ9NUM4 274 aa1.89□□□□□ -2.11
VPS36-206ENST00000497149 SERP1Q9Y6X1 66 aa1.89□□□□□ -2.11
VPS36-206ENST00000497149 ZFYVE16Q7Z3T8 1539 aa1.89□□□□□ -2.11
VPS36-206ENST00000497149 ADAMTS7Q9UKP4 1686 aa1.89□□□□□ -2.11
VPS36-206ENST00000497149 TNRC6AQ8NDV7 1962 aaKnown RBP1.89□□□□□ -2.11
VPS36-206ENST00000497149 KIAA1551Q9HCM1 1747 aa1.88□□□□□ -2.11
VPS36-206ENST00000497149 A2ML1A8K2U0 1454 aa1.88□□□□□ -2.11
VPS36-206ENST00000497149 MAGI1Q96QZ7 1491 aaPredicted RBP1.88□□□□□ -2.11
VPS36-206ENST00000497149 MBD5Q9P267 1494 aa1.88□□□□□ -2.11
VPS36-206ENST00000497149 TRGV5A0A0B4J1U4 118 aa1.88□□□□□ -2.11
VPS36-206ENST00000497149 IGHV3-73A0A0B4J1V6 119 aa1.88□□□□□ -2.11
VPS36-206ENST00000497149 TRGV4A0A0C4DH28 118 aa1.88□□□□□ -2.11
VPS36-206ENST00000497149 IGKV1-9A0A0C4DH69 117 aa1.88□□□□□ -2.11
VPS36-206ENST00000497149 MCRIP1C9JLW8 97 aa1.88□□□□□ -2.11
VPS36-206ENST00000497149 GZMBP10144 247 aa1.88□□□□□ -2.11
VPS36-206ENST00000497149 RNASE4P34096 147 aaKnown RBP1.88□□□□□ -2.11
VPS36-206ENST00000497149 CDK5R1Q15078 307 aa1.88□□□□□ -2.11
VPS36-206ENST00000497149 IQCJQ1A5X6 159 aa1.88□□□□□ -2.11
VPS36-206ENST00000497149 KHDC3LQ587J8 217 aa1.88□□□□□ -2.11
VPS36-206ENST00000497149 Q6AWC8 147 aa1.88□□□□□ -2.11
VPS36-206ENST00000497149 SDIM1Q6ZPB5 146 aa1.88□□□□□ -2.11
VPS36-206ENST00000497149 C7orf65Q6ZTY9 151 aa1.88□□□□□ -2.11
VPS36-206ENST00000497149 SLC35E3Q7Z769 313 aa1.88□□□□□ -2.11
VPS36-206ENST00000497149 CNEP1R1Q8N9A8 125 aa1.88□□□□□ -2.11
VPS36-206ENST00000497149 WFDC11Q8NEX6 87 aa1.88□□□□□ -2.11
VPS36-206ENST00000497149 SMCR5Q8TEV8 140 aa1.88□□□□□ -2.11
VPS36-206ENST00000497149 TAS2R4Q9NYW5 299 aa1.88□□□□□ -2.11
VPS36-206ENST00000497149 WNK3Q9BYP7 1800 aa1.88□□□□□ -2.11
VPS36-206ENST00000497149 TROQ12816 1431 aaPredicted RBP1.88□□□□□ -2.11
VPS36-206ENST00000497149 PHLPP1O60346 1717 aa1.88□□□□□ -2.11
VPS36-206ENST00000497149 SNRNP200O75643 2136 aaKnown RBP1.87□□□□□ -2.11
VPS36-206ENST00000497149 LOC107986453A0A1B0GWG9 222 aa1.87□□□□□ -2.11
VPS36-206ENST00000497149 F8W1H4 67 aa1.87□□□□□ -2.11
VPS36-206ENST00000497149 H3BQ15 152 aa1.87□□□□□ -2.11
VPS36-206ENST00000497149 J3QKU1 62 aa1.87□□□□□ -2.11
VPS36-206ENST00000497149 M0R2P5 195 aa1.87□□□□□ -2.11
VPS36-206ENST00000497149 SDCBPO00560 298 aaPredicted RBP1.87□□□□□ -2.11
VPS36-206ENST00000497149 RGS12O14924 1447 aa1.87□□□□□ -2.11
VPS36-206ENST00000497149 IGKV1-16P04430 117 aa1.87□□□□□ -2.11
VPS36-206ENST00000497149 IGLC1P0CG04 106 aa1.87□□□□□ -2.11
VPS36-206ENST00000497149 SAA1P0DJI8 122 aaPredicted RBP1.87□□□□□ -2.11
VPS36-206ENST00000497149 CCL3P10147 92 aa1.87□□□□□ -2.11
VPS36-206ENST00000497149 IL7P13232 177 aa1.87□□□□□ -2.11
VPS36-206ENST00000497149 CD24P25063 80 aa1.87□□□□□ -2.11
VPS36-206ENST00000497149 COL5A3P25940 1745 aaPredicted RBP1.87□□□□□ -2.11
VPS36-206ENST00000497149 CKS2P33552 79 aa1.87□□□□□ -2.11
VPS36-206ENST00000497149 PCBD1P61457 104 aa1.87□□□□□ -2.11
VPS36-206ENST00000497149 SNRPD3P62318 126 aaKnown RBP1.87□□□□□ -2.11
VPS36-206ENST00000497149 BLCAPP62952 87 aa1.87□□□□□ -2.11
VPS36-206ENST00000497149 DCDP81605 110 aaKnown RBP1.87□□□□□ -2.11
VPS36-206ENST00000497149 CIRBPQ14011 172 aaKnown RBP1.87□□□□□ -2.11
VPS36-206ENST00000497149 PEA15Q15121 130 aa1.87□□□□□ -2.11
VPS36-206ENST00000497149 ASB16-AS1Q495Z4 193 aa1.87□□□□□ -2.11
VPS36-206ENST00000497149 MYOM3Q5VTT5 1437 aa1.87□□□□□ -2.11
VPS36-206ENST00000497149 NUP210LQ5VU65 1888 aa1.87□□□□□ -2.11
VPS36-206ENST00000497149 ATP11AUNQ6ZP68 121 aa1.87□□□□□ -2.11
VPS36-206ENST00000497149 Q6ZUT4 128 aa1.87□□□□□ -2.11
VPS36-206ENST00000497149 OR5AS1Q8N127 324 aa1.87□□□□□ -2.11
VPS36-206ENST00000497149 VWDEQ8N2E2 1590 aa1.87□□□□□ -2.11
VPS36-206ENST00000497149 SIGLECL1Q8N7X8 197 aa1.87□□□□□ -2.11
VPS36-206ENST00000497149 OR2T35Q8NGX2 323 aa1.87□□□□□ -2.11
VPS36-206ENST00000497149 CHCHD1Q96BP2 118 aaKnown RBP1.87□□□□□ -2.11
VPS36-206ENST00000497149 LINC00467Q9BRT7 94 aa1.87□□□□□ -2.11
VPS36-206ENST00000497149 SMDT1Q9H4I9 107 aa1.87□□□□□ -2.11
VPS36-206ENST00000497149 BCL2L10Q9HD36 194 aa1.87□□□□□ -2.11
VPS36-206ENST00000497149 BAZ1AQ9NRL2 1556 aaPredicted RBP1.87□□□□□ -2.11
VPS36-206ENST00000497149 RPL26L1Q9UNX3 145 aaKnown RBP1.87□□□□□ -2.11
VPS36-206ENST00000497149 CCL26Q9Y258 94 aa1.87□□□□□ -2.11
VPS36-206ENST00000497149 ALPK3Q96L96 1907 aa1.87□□□□□ -2.11
VPS36-206ENST00000497149 MAST2Q6P0Q8 1798 aa1.87□□□□□ -2.11
VPS36-206ENST00000497149 HECW1Q76N89 1606 aa1.87□□□□□ -2.11
VPS36-206ENST00000497149 ADGRL2O95490 1459 aa1.87□□□□□ -2.11
VPS36-206ENST00000497149 TEX14Q8IWB6 1497 aa1.87□□□□□ -2.11
VPS36-206ENST00000497149 ANKRD31Q8N7Z5 1873 aa1.86□□□□□ -2.11
VPS36-206ENST00000497149 SYNJ1O43426 1573 aa1.86□□□□□ -2.11
VPS36-206ENST00000497149 A0A1W2PQD3 144 aa1.86□□□□□ -2.11
VPS36-206ENST00000497149 ODF3BA8MYP8 253 aa1.86□□□□□ -2.11
VPS36-206ENST00000497149 K7ERJ3 54 aa1.86□□□□□ -2.11
VPS36-206ENST00000497149 SSSCA1O60232 199 aa1.86□□□□□ -2.11
VPS36-206ENST00000497149 OR1I1O60431 355 aa1.86□□□□□ -2.11
VPS36-206ENST00000497149 SNCGO76070 127 aa1.86□□□□□ -2.11
VPS36-206ENST00000497149 LY6HO94772 140 aa1.86□□□□□ -2.11
VPS36-206ENST00000497149 GYPAP02724 150 aa1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms