RNA–Protein interactions for RNA: ENST00000497026.5

CSMD3-208, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 1,406 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-208ENST00000497026 A0A0G2JLM5 398 aa3.85□□□□□ -1.79
CSMD3-208ENST00000497026 FAM231BA6NCW3 169 aa3.85□□□□□ -1.79
CSMD3-208ENST00000497026 H3BUX3 64 aa3.85□□□□□ -1.79
CSMD3-208ENST00000497026 MPDU1O75352 247 aa3.85□□□□□ -1.79
CSMD3-208ENST00000497026 OR7C1O76099 320 aaPredicted RBP3.85□□□□□ -1.79
CSMD3-208ENST00000497026 NDUFB4O95168 129 aa3.85□□□□□ -1.79
CSMD3-208ENST00000497026 NDUFA7O95182 113 aa3.85□□□□□ -1.79
CSMD3-208ENST00000497026 TMEM50AO95807 157 aa3.85□□□□□ -1.79
CSMD3-208ENST00000497026 CXorf1O96002 111 aa3.85□□□□□ -1.79
CSMD3-208ENST00000497026 IGLV1-47P01700 117 aa3.85□□□□□ -1.79
CSMD3-208ENST00000497026 OR5AL1P0C617 328 aa3.85□□□□□ -1.79
CSMD3-208ENST00000497026 OR9G9P0C7N8 305 aa3.85□□□□□ -1.79
CSMD3-208ENST00000497026 IAPPP10997 89 aa3.85□□□□□ -1.79
CSMD3-208ENST00000497026 F2RP25116 425 aa3.85□□□□□ -1.79
CSMD3-208ENST00000497026 HOXD3P31249 432 aaPredicted RBP3.85□□□□□ -1.79
CSMD3-208ENST00000497026 SSTR5P35346 364 aa3.85□□□□□ -1.79
CSMD3-208ENST00000497026 TCL1AP56279 114 aa3.85□□□□□ -1.79
CSMD3-208ENST00000497026 KRTAP10-3P60369 221 aa3.85□□□□□ -1.79
CSMD3-208ENST00000497026 CX3CL1P78423 397 aa3.85□□□□□ -1.79
CSMD3-208ENST00000497026 KLF5Q13887 457 aaPredicted RBP3.85□□□□□ -1.79
CSMD3-208ENST00000497026 TMEM97Q5BJF2 176 aa3.85□□□□□ -1.79
CSMD3-208ENST00000497026 TMEM136Q6ZRR5 245 aa3.85□□□□□ -1.79
CSMD3-208ENST00000497026 HAPLN4Q86UW8 402 aa3.85□□□□□ -1.79
CSMD3-208ENST00000497026 RPP25LQ8N5L8 163 aaKnown RBP3.85□□□□□ -1.79
CSMD3-208ENST00000497026 LINC01006Q8NI28 216 aa3.85□□□□□ -1.79
CSMD3-208ENST00000497026 C18orf32Q8TCD1 76 aa3.85□□□□□ -1.79
CSMD3-208ENST00000497026 C11orf52Q96A22 123 aa3.85□□□□□ -1.79
CSMD3-208ENST00000497026 CHCHD1Q96BP2 118 aaKnown RBP3.85□□□□□ -1.79
CSMD3-208ENST00000497026 GRAMD2BQ96HH9 432 aa3.85□□□□□ -1.79
CSMD3-208ENST00000497026 OR4C12Q96R67 309 aa3.85□□□□□ -1.79
CSMD3-208ENST00000497026 HDHD3Q9BSH5 251 aaPredicted RBP3.85□□□□□ -1.79
CSMD3-208ENST00000497026 MAP1LC3CQ9BXW4 147 aa3.85□□□□□ -1.79
CSMD3-208ENST00000497026 TMEM133Q9H2Q1 129 aa3.85□□□□□ -1.79
CSMD3-208ENST00000497026 NPVFQ9HCQ7 196 aa3.85□□□□□ -1.79
CSMD3-208ENST00000497026 OSTCQ9NRP0 149 aa3.85□□□□□ -1.79
CSMD3-208ENST00000497026 CACNG5Q9UF02 275 aa3.85□□□□□ -1.79
CSMD3-208ENST00000497026 HSPB8Q9UJY1 196 aa3.85□□□□□ -1.79
CSMD3-208ENST00000497026 ZNF257Q9Y2Q1 563 aa3.85□□□□□ -1.79
CSMD3-208ENST00000497026 TSSC4Q9Y5U2 329 aaPredicted RBP3.85□□□□□ -1.79
CSMD3-208ENST00000497026 STAB1Q9NY15 2570 aa3.84□□□□□ -1.79
CSMD3-208ENST00000497026 TRGV10A0A0A0MS01 117 aa3.84□□□□□ -1.79
CSMD3-208ENST00000497026 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.84□□□□□ -1.79
CSMD3-208ENST00000497026 A0A1W2PPM0 123 aa3.84□□□□□ -1.79
CSMD3-208ENST00000497026 TMEM189A5PLL7 270 aa3.84□□□□□ -1.79
CSMD3-208ENST00000497026 IZUMO1RA6ND01 250 aa3.84□□□□□ -1.79
CSMD3-208ENST00000497026 FAM90A20PA6NIJ5 464 aa3.84□□□□□ -1.79
CSMD3-208ENST00000497026 FAM90A7PA6NKC0 464 aa3.84□□□□□ -1.79
CSMD3-208ENST00000497026 FAM90A22PA8MWA6 464 aa3.84□□□□□ -1.79
CSMD3-208ENST00000497026 FAM90A12PA8MX19 464 aa3.84□□□□□ -1.79
CSMD3-208ENST00000497026 FAM90A23PA8MXZ1 464 aa3.84□□□□□ -1.79
CSMD3-208ENST00000497026 NPIPB11E5RHQ5 1161 aa3.84□□□□□ -1.79
CSMD3-208ENST00000497026 H3BUT2 72 aa3.84□□□□□ -1.79
CSMD3-208ENST00000497026 BMPR1BO00238 502 aa3.84□□□□□ -1.79
CSMD3-208ENST00000497026 TSPAN13O95857 204 aa3.84□□□□□ -1.79
CSMD3-208ENST00000497026 CT45A6P0DMU7 189 aa3.84□□□□□ -1.79
CSMD3-208ENST00000497026 CT45A5P0DMU8 189 aa3.84□□□□□ -1.79
CSMD3-208ENST00000497026 CT45A7P0DMV0 189 aa3.84□□□□□ -1.79
CSMD3-208ENST00000497026 COX8AP10176 69 aa3.84□□□□□ -1.79
CSMD3-208ENST00000497026 ATP5G3P48201 142 aa3.84□□□□□ -1.79
CSMD3-208ENST00000497026 LY6EQ16553 131 aa3.84□□□□□ -1.79
CSMD3-208ENST00000497026 TIGITQ495A1 244 aa3.84□□□□□ -1.79
CSMD3-208ENST00000497026 CT45A1Q5HYN5 189 aa3.84□□□□□ -1.79
CSMD3-208ENST00000497026 SPANXN5Q5MJ07 72 aa3.84□□□□□ -1.79
CSMD3-208ENST00000497026 FAM53AQ6NSI3 398 aaPredicted RBP3.84□□□□□ -1.79
CSMD3-208ENST00000497026 FOXI2Q6ZQN5 318 aa3.84□□□□□ -1.79
CSMD3-208ENST00000497026 LINC00596Q86U02 117 aa3.84□□□□□ -1.79
CSMD3-208ENST00000497026 GAPTQ8N292 157 aa3.84□□□□□ -1.79
CSMD3-208ENST00000497026 ZNF645Q8N7E2 425 aa3.84□□□□□ -1.79
CSMD3-208ENST00000497026 C3orf56Q8N813 242 aa3.84□□□□□ -1.79
CSMD3-208ENST00000497026 OR4X2Q8NGF9 303 aa3.84□□□□□ -1.79
CSMD3-208ENST00000497026 OR9G4Q8NGQ1 327 aa3.84□□□□□ -1.79
CSMD3-208ENST00000497026 OR4A16Q8NH70 328 aa3.84□□□□□ -1.79
CSMD3-208ENST00000497026 CT45A3Q8NHU0 189 aa3.84□□□□□ -1.79
CSMD3-208ENST00000497026 BLNKQ8WV28 456 aa3.84□□□□□ -1.79
CSMD3-208ENST00000497026 ST6GALNAC6Q969X2 333 aa3.84□□□□□ -1.79
CSMD3-208ENST00000497026 GPR82Q96P67 336 aa3.84□□□□□ -1.79
CSMD3-208ENST00000497026 RCHY1Q96PM5 261 aa3.84□□□□□ -1.79
CSMD3-208ENST00000497026 NPCDR1Q9BY65 106 aa3.84□□□□□ -1.79
CSMD3-208ENST00000497026 VCX2Q9H322 139 aa3.84□□□□□ -1.79
CSMD3-208ENST00000497026 FNDC4Q9H6D8 234 aaPredicted RBP3.84□□□□□ -1.79
CSMD3-208ENST00000497026 LINC00574Q9H8X3 128 aa3.84□□□□□ -1.79
CSMD3-208ENST00000497026 SIGLEC8Q9NYZ4 499 aa3.84□□□□□ -1.79
CSMD3-208ENST00000497026 MDFICQ9P1T7 246 aa3.84□□□□□ -1.79
CSMD3-208ENST00000497026 CYSLTR1Q9Y271 337 aa3.84□□□□□ -1.79
CSMD3-208ENST00000497026 KBTBD11-OT1A0A1B0GTJ5 212 aa3.83□□□□□ -1.8
CSMD3-208ENST00000497026 TEX48A0A1B0GUV7 120 aa3.83□□□□□ -1.8
CSMD3-208ENST00000497026 CLPSL1A2RUU4 121 aa3.83□□□□□ -1.8
CSMD3-208ENST00000497026 A6NDX4 124 aa3.83□□□□□ -1.8
CSMD3-208ENST00000497026 LY6LH3BQJ8 138 aa3.83□□□□□ -1.8
CSMD3-208ENST00000497026 C15orf65H3BRN8 121 aa3.83□□□□□ -1.8
CSMD3-208ENST00000497026 SYS1-DBNDD2H3BUS1 97 aa3.83□□□□□ -1.8
CSMD3-208ENST00000497026 CRXO43186 299 aaPredicted RBP3.83□□□□□ -1.8
CSMD3-208ENST00000497026 LEPROTL1O95214 131 aa3.83□□□□□ -1.8
CSMD3-208ENST00000497026 NAPSAO96009 420 aa3.83□□□□□ -1.8
CSMD3-208ENST00000497026 IGKV1D-33P01593 117 aa3.83□□□□□ -1.8
CSMD3-208ENST00000497026 IGKV1-33P01594 117 aa3.83□□□□□ -1.8
CSMD3-208ENST00000497026 IGHV3-7P01780 117 aa3.83□□□□□ -1.8
CSMD3-208ENST00000497026 GPR12P47775 334 aa3.83□□□□□ -1.8
CSMD3-208ENST00000497026 DIAPH2-AS1Q14236 149 aa3.83□□□□□ -1.8
CSMD3-208ENST00000497026 PSMG4Q5JS54 123 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms