RNA–Protein interactions for RNA: ENST00000497022.1

VPS26A-208, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-208ENST00000497022 OR2H2O95918 312 aa0.69□□□□□ -2.3
VPS26A-208ENST00000497022 TSPAN19P0C672 248 aa0.69□□□□□ -2.3
VPS26A-208ENST00000497022 IGLC6P0CF74 106 aa0.69□□□□□ -2.3
VPS26A-208ENST00000497022 ROMO1P60602 79 aa0.69□□□□□ -2.3
VPS26A-208ENST00000497022 CNBPP62633 177 aaKnown RBP0.69□□□□□ -2.3
VPS26A-208ENST00000497022 VMA21Q3ZAQ7 101 aa0.69□□□□□ -2.3
VPS26A-208ENST00000497022 TMEM244Q5VVB8 128 aa0.69□□□□□ -2.3
VPS26A-208ENST00000497022 GLIPR1L1Q6UWM5 242 aa0.69□□□□□ -2.3
VPS26A-208ENST00000497022 CROCCP2Q86T23 111 aa0.69□□□□□ -2.3
VPS26A-208ENST00000497022 DEFB119Q8N690 84 aa0.69□□□□□ -2.3
VPS26A-208ENST00000497022 OR4K15Q8NH41 348 aa0.69□□□□□ -2.3
VPS26A-208ENST00000497022 BRK1Q8WUW1 75 aa0.69□□□□□ -2.3
VPS26A-208ENST00000497022 SKA2Q8WVK7 121 aaPredicted RBP0.69□□□□□ -2.3
VPS26A-208ENST00000497022 ZNF714Q96N38 554 aa0.69□□□□□ -2.3
VPS26A-208ENST00000497022 TSC22D3Q99576 134 aa0.69□□□□□ -2.3
VPS26A-208ENST00000497022 LINC00470Q9BZP3 86 aa0.69□□□□□ -2.3
VPS26A-208ENST00000497022 SOX21Q9Y651 276 aaPredicted RBP0.69□□□□□ -2.3
VPS26A-208ENST00000497022 MYH1P12882 1939 aa0.69□□□□□ -2.3
VPS26A-208ENST00000497022 FBN2P35556 2912 aa0.69□□□□□ -2.3
VPS26A-208ENST00000497022 UNC13CQ8NB66 2214 aa0.69□□□□□ -2.3
VPS26A-208ENST00000497022 FANCMQ8IYD8 2048 aa0.69□□□□□ -2.3
VPS26A-208ENST00000497022 ZFYVE16Q7Z3T8 1539 aa0.69□□□□□ -2.3
VPS26A-208ENST00000497022 DLC1Q96QB1 1528 aa0.69□□□□□ -2.3
VPS26A-208ENST00000497022 PTPRMP28827 1452 aa0.68□□□□□ -2.3
VPS26A-208ENST00000497022 MRC2Q9UBG0 1479 aa0.68□□□□□ -2.3
VPS26A-208ENST00000497022 WDR7Q9Y4E6 1490 aa0.68□□□□□ -2.3
VPS26A-208ENST00000497022 TRBV6-8A0A0A6YYG3 113 aa0.68□□□□□ -2.3
VPS26A-208ENST00000497022 IGKV3D-7A0A0C4DH55 119 aa0.68□□□□□ -2.3
VPS26A-208ENST00000497022 IGKV3OR2-268A0A0C4DH90 116 aa0.68□□□□□ -2.3
VPS26A-208ENST00000497022 TCRBV4S1A1TA0A5B7 111 aa0.68□□□□□ -2.3
VPS26A-208ENST00000497022 C17orf112F2Z3M2 114 aa0.68□□□□□ -2.3
VPS26A-208ENST00000497022 MGAMO43451 1857 aa0.68□□□□□ -2.3
VPS26A-208ENST00000497022 HIST1H2BKO60814 126 aa0.68□□□□□ -2.3
VPS26A-208ENST00000497022 HYPMO75409 117 aa0.68□□□□□ -2.3
VPS26A-208ENST00000497022 CST7O76096 145 aa0.68□□□□□ -2.3
VPS26A-208ENST00000497022 APOC1P02654 83 aa0.68□□□□□ -2.3
VPS26A-208ENST00000497022 TCRAP04437 139 aa0.68□□□□□ -2.3
VPS26A-208ENST00000497022 SLC25A5P05141 298 aaKnown RBP0.68□□□□□ -2.3
VPS26A-208ENST00000497022 HIST1H2BJP06899 126 aa0.68□□□□□ -2.3
VPS26A-208ENST00000497022 SCTP09683 121 aa0.68□□□□□ -2.3
VPS26A-208ENST00000497022 BCL2P10415 239 aa0.68□□□□□ -2.3
VPS26A-208ENST00000497022 COX4I1P13073 169 aa0.68□□□□□ -2.3
VPS26A-208ENST00000497022 ZNF25P17030 456 aaPredicted RBP0.68□□□□□ -2.3
VPS26A-208ENST00000497022 FOXA3P55318 350 aaPredicted RBP0.68□□□□□ -2.3
VPS26A-208ENST00000497022 RPS25P62851 125 aaKnown RBP0.68□□□□□ -2.3
VPS26A-208ENST00000497022 HBBP68871 147 aa0.68□□□□□ -2.3
VPS26A-208ENST00000497022 OCIAD2Q56VL3 154 aa0.68□□□□□ -2.3
VPS26A-208ENST00000497022 C1orf137Q5JT78 98 aa0.68□□□□□ -2.3
VPS26A-208ENST00000497022 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.68□□□□□ -2.3
VPS26A-208ENST00000497022 CLECL1Q8IZS7 167 aa0.68□□□□□ -2.3
VPS26A-208ENST00000497022 FAM19A2Q8N3H0 131 aa0.68□□□□□ -2.3
VPS26A-208ENST00000497022 Q8N814 137 aa0.68□□□□□ -2.3
VPS26A-208ENST00000497022 OR5D16Q8NGK9 328 aa0.68□□□□□ -2.3
VPS26A-208ENST00000497022 TMEM254Q8TBM7 123 aa0.68□□□□□ -2.3
VPS26A-208ENST00000497022 NAT14Q8WUY8 206 aa0.68□□□□□ -2.3
VPS26A-208ENST00000497022 C4orf3Q8WVX3 66 aa0.68□□□□□ -2.3
VPS26A-208ENST00000497022 LSM10Q969L4 123 aaKnown RBP0.68□□□□□ -2.3
VPS26A-208ENST00000497022 CHCHD1Q96BP2 118 aaKnown RBP0.68□□□□□ -2.3
VPS26A-208ENST00000497022 ISOC1Q96CN7 298 aa0.68□□□□□ -2.3
VPS26A-208ENST00000497022 COPZ2Q9P299 210 aa0.68□□□□□ -2.3
VPS26A-208ENST00000497022 NAT8BQ9UHF3 227 aa0.68□□□□□ -2.3
VPS26A-208ENST00000497022 LSM2Q9Y333 95 aaKnown RBP0.68□□□□□ -2.3
VPS26A-208ENST00000497022 SNURFQ9Y675 71 aa0.68□□□□□ -2.3
VPS26A-208ENST00000497022 CHCHD2Q9Y6H1 151 aaPredicted RBP0.68□□□□□ -2.3
VPS26A-208ENST00000497022 EML5Q05BV3 1969 aa0.68□□□□□ -2.3
VPS26A-208ENST00000497022 PTPRDP23468 1912 aa0.68□□□□□ -2.3
VPS26A-208ENST00000497022 LAMB4A4D0S4 1761 aa0.68□□□□□ -2.3
VPS26A-208ENST00000497022 LRP5O75197 1615 aa0.67□□□□□ -2.3
VPS26A-208ENST00000497022 ZFHX3Q15911 3703 aa0.67□□□□□ -2.3
VPS26A-208ENST00000497022 PZPP20742 1482 aa0.67□□□□□ -2.3
VPS26A-208ENST00000497022 ABCC10Q5T3U5 1492 aa0.67□□□□□ -2.3
VPS26A-208ENST00000497022 MAGI1Q96QZ7 1491 aaPredicted RBP0.67□□□□□ -2.3
VPS26A-208ENST00000497022 CDK5RAP2Q96SN8 1893 aa0.67□□□□□ -2.3
VPS26A-208ENST00000497022 ANKRD26Q9UPS8 1709 aa0.67□□□□□ -2.3
VPS26A-208ENST00000497022 EIF4G3O43432 1585 aaKnown RBP0.67□□□□□ -2.3
VPS26A-208ENST00000497022 IGKV2-29A2NJV5 120 aaPredicted RBP0.67□□□□□ -2.3
VPS26A-208ENST00000497022 E7EUB6 86 aa0.67□□□□□ -2.3
VPS26A-208ENST00000497022 ZNF670-ZNF695F2Z2N8 137 aa0.67□□□□□ -2.3
VPS26A-208ENST00000497022 NPFFO15130 113 aa0.67□□□□□ -2.3
VPS26A-208ENST00000497022 RER1O15258 196 aa0.67□□□□□ -2.3
VPS26A-208ENST00000497022 CD3DP04234 171 aa0.67□□□□□ -2.3
VPS26A-208ENST00000497022 IFNA4P05014 189 aa0.67□□□□□ -2.3
VPS26A-208ENST00000497022 CD14P08571 375 aa0.67□□□□□ -2.3
VPS26A-208ENST00000497022 S100A1P23297 94 aa0.67□□□□□ -2.3
VPS26A-208ENST00000497022 CMPK1P30085 196 aa0.67□□□□□ -2.3
VPS26A-208ENST00000497022 ZNF93P35789 620 aaPredicted RBP0.67□□□□□ -2.3
VPS26A-208ENST00000497022 RPL35P42766 123 aaKnown RBP0.67□□□□□ -2.3
VPS26A-208ENST00000497022 DSCR4P56555 118 aaPredicted RBP0.67□□□□□ -2.3
VPS26A-208ENST00000497022 SNRPD3P62318 126 aaKnown RBP0.67□□□□□ -2.3
VPS26A-208ENST00000497022 CDK6Q00534 326 aa0.67□□□□□ -2.3
VPS26A-208ENST00000497022 EMX2Q04743 252 aa0.67□□□□□ -2.3
VPS26A-208ENST00000497022 C1orf134Q5TEV5 83 aa0.67□□□□□ -2.3
VPS26A-208ENST00000497022 KRTAP26-1Q6PEX3 210 aa0.67□□□□□ -2.3
VPS26A-208ENST00000497022 TEX261Q6UWH6 196 aa0.67□□□□□ -2.3
VPS26A-208ENST00000497022 ZCCHC23Q6ZST2 131 aa0.67□□□□□ -2.3
VPS26A-208ENST00000497022 TCTE3Q8IZS6 198 aa0.67□□□□□ -2.3
VPS26A-208ENST00000497022 OR8I2Q8N0Y5 310 aa0.67□□□□□ -2.3
VPS26A-208ENST00000497022 MORN4Q8NDC4 146 aa0.67□□□□□ -2.3
VPS26A-208ENST00000497022 OR51A4Q8NGJ6 313 aa0.67□□□□□ -2.3
VPS26A-208ENST00000497022 CCL4L1Q8NHW4 92 aa0.67□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms