RNA–Protein interactions for RNA: ENST00000496569.1

HDLBP-246, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 374 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-246ENST00000496569 HMGB3O15347 200 aaKnown RBP8.59□□□□□ -1.03
HDLBP-246ENST00000496569 PTTG1O95997 202 aa8.59□□□□□ -1.03
HDLBP-246ENST00000496569 IFNA5P01569 189 aa8.59□□□□□ -1.03
HDLBP-246ENST00000496569 RAB2AP61019 212 aa8.59□□□□□ -1.03
HDLBP-246ENST00000496569 UBE2L3P68036 154 aaKnown RBP8.59□□□□□ -1.03
HDLBP-246ENST00000496569 PDE6HQ13956 83 aa8.59□□□□□ -1.03
HDLBP-246ENST00000496569 UBE2DNLQ8IWF7 75 aa8.59□□□□□ -1.03
HDLBP-246ENST00000496569 POM121L12Q8N7R1 296 aa8.59□□□□□ -1.03
HDLBP-246ENST00000496569 ODF3Q96PU9 254 aa8.59□□□□□ -1.03
HDLBP-246ENST00000496569 AAMDCQ9H7C9 122 aa8.59□□□□□ -1.03
HDLBP-246ENST00000496569 KCNIP2Q9NS61 270 aa8.59□□□□□ -1.03
HDLBP-246ENST00000496569 TIMM8BQ9Y5J9 83 aaPredicted RBP8.59□□□□□ -1.03
HDLBP-246ENST00000496569 PKHD1P08F94 4074 aa8.58□□□□□ -1.04
HDLBP-246ENST00000496569 GAGE12BA1L429 117 aa8.58□□□□□ -1.04
HDLBP-246ENST00000496569 GAGE7O76087 117 aa8.58□□□□□ -1.04
HDLBP-246ENST00000496569 GAGE12FP0CL80 117 aa8.58□□□□□ -1.04
HDLBP-246ENST00000496569 GAGE12GP0CL81 117 aa8.58□□□□□ -1.04
HDLBP-246ENST00000496569 GAGE12IP0CL82 117 aa8.58□□□□□ -1.04
HDLBP-246ENST00000496569 P0DMU3 169 aa8.58□□□□□ -1.04
HDLBP-246ENST00000496569 FAM231AP0DMU4 169 aa8.58□□□□□ -1.04
HDLBP-246ENST00000496569 FAM231CP0DMU5 169 aa8.58□□□□□ -1.04
HDLBP-246ENST00000496569 RNASE4P34096 147 aaKnown RBP8.58□□□□□ -1.04
HDLBP-246ENST00000496569 RANP62826 216 aaKnown RBP8.58□□□□□ -1.04
HDLBP-246ENST00000496569 SCGB1C1Q8TD33 95 aa8.58□□□□□ -1.04
HDLBP-246ENST00000496569 FAM19A4Q96LR4 140 aa8.58□□□□□ -1.04
HDLBP-246ENST00000496569 MED28Q9H204 178 aa8.58□□□□□ -1.04
HDLBP-246ENST00000496569 Q9H3A6 140 aa8.58□□□□□ -1.04
HDLBP-246ENST00000496569 RPH3ALQ9UNE2 315 aa8.58□□□□□ -1.04
HDLBP-246ENST00000496569 PRELID1Q9Y255 219 aa8.58□□□□□ -1.04
HDLBP-246ENST00000496569 KLLNB2CW77 178 aa8.57□□□□□ -1.04
HDLBP-246ENST00000496569 ATP5G1P05496 136 aa8.57□□□□□ -1.04
HDLBP-246ENST00000496569 ATP5G3P48201 142 aa8.57□□□□□ -1.04
HDLBP-246ENST00000496569 ZFAND2AQ8N6M9 145 aa8.57□□□□□ -1.04
HDLBP-246ENST00000496569 HSD17B11Q8NBQ5 300 aa8.57□□□□□ -1.04
HDLBP-246ENST00000496569 C20orf144Q9BQM9 153 aa8.57□□□□□ -1.04
HDLBP-246ENST00000496569 TP53TG3Q9ULZ0 132 aa8.57□□□□□ -1.04
HDLBP-246ENST00000496569 PKD1P98161 4303 aa8.57□□□□□ -1.04
HDLBP-246ENST00000496569 DNAH11Q96DT5 4516 aa8.56□□□□□ -1.04
HDLBP-246ENST00000496569 NUDT3O95989 172 aa8.56□□□□□ -1.04
HDLBP-246ENST00000496569 SLC25A5P05141 298 aaKnown RBP8.56□□□□□ -1.04
HDLBP-246ENST00000496569 TMEM78Q5T7P6 136 aa8.56□□□□□ -1.04
HDLBP-246ENST00000496569 ZNF493Q6ZR52 646 aa8.56□□□□□ -1.04
HDLBP-246ENST00000496569 C9orf47Q6ZRZ4 202 aa8.56□□□□□ -1.04
HDLBP-246ENST00000496569 Q6ZTI0 123 aa8.56□□□□□ -1.04
HDLBP-246ENST00000496569 CCDC28AQ8IWP9 274 aa8.56□□□□□ -1.04
HDLBP-246ENST00000496569 FAM210BQ96KR6 192 aa8.56□□□□□ -1.04
HDLBP-246ENST00000496569 HYLS1Q96M11 299 aa8.56□□□□□ -1.04
HDLBP-246ENST00000496569 GSN-AS1Q9NRJ2 163 aa8.56□□□□□ -1.04
HDLBP-246ENST00000496569 A0A0J9YY99 117 aa8.55□□□□□ -1.04
HDLBP-246ENST00000496569 CBY3A6NI87 242 aa8.55□□□□□ -1.04
HDLBP-246ENST00000496569 SNURFLB1AK76 121 aa8.55□□□□□ -1.04
HDLBP-246ENST00000496569 ZNF324O75467 553 aaPredicted RBP8.55□□□□□ -1.04
HDLBP-246ENST00000496569 GPX1P07203 203 aa8.55□□□□□ -1.04
HDLBP-246ENST00000496569 HOXA5P20719 270 aa8.55□□□□□ -1.04
HDLBP-246ENST00000496569 KHDC3LQ587J8 217 aa8.55□□□□□ -1.04
HDLBP-246ENST00000496569 LINC00612Q8N6U2 182 aa8.55□□□□□ -1.04
HDLBP-246ENST00000496569 C11orf72Q8NBR9 251 aa8.55□□□□□ -1.04
HDLBP-246ENST00000496569 LINC00477Q96M19 166 aa8.55□□□□□ -1.04
HDLBP-246ENST00000496569 PYGO2Q9BRQ0 406 aa8.55□□□□□ -1.04
HDLBP-246ENST00000496569 KRTAP17-1Q9BYP8 105 aa8.55□□□□□ -1.04
HDLBP-246ENST00000496569 SH3BGRL3Q9H299 93 aa8.55□□□□□ -1.04
HDLBP-246ENST00000496569 TMPRSS5Q9H3S3 457 aa8.55□□□□□ -1.04
HDLBP-246ENST00000496569 ZNF492Q9P255 531 aa8.55□□□□□ -1.04
HDLBP-246ENST00000496569 KLF12Q9Y4X4 402 aa8.55□□□□□ -1.04
HDLBP-246ENST00000496569 CRISP2P16562 243 aa8.54□□□□□ -1.04
HDLBP-246ENST00000496569 M6PRP20645 277 aa8.54□□□□□ -1.04
HDLBP-246ENST00000496569 GNG5P63218 68 aa8.54□□□□□ -1.04
HDLBP-246ENST00000496569 OR5I1Q13606 314 aa8.54□□□□□ -1.04
HDLBP-246ENST00000496569 ACOT6Q3I5F7 207 aaPredicted RBP8.54□□□□□ -1.04
HDLBP-246ENST00000496569 MUC21Q5SSG8 566 aa8.54□□□□□ -1.04
HDLBP-246ENST00000496569 AQP10Q96PS8 301 aa8.54□□□□□ -1.04
HDLBP-246ENST00000496569 KIAA1109Q2LD37 5005 aa8.54□□□□□ -1.04
HDLBP-246ENST00000496569 HERC2O95714 4834 aa8.54□□□□□ -1.04
HDLBP-246ENST00000496569 FXYD6-FXYD2A0A087WZ82 144 aa8.53□□□□□ -1.04
HDLBP-246ENST00000496569 RNF222A6NCQ9 220 aa8.53□□□□□ -1.04
HDLBP-246ENST00000496569 RTL8CO15255 209 aa8.53□□□□□ -1.04
HDLBP-246ENST00000496569 GIPP09681 153 aaPredicted RBP8.53□□□□□ -1.04
HDLBP-246ENST00000496569 ATP6V0CP27449 155 aa8.53□□□□□ -1.04
HDLBP-246ENST00000496569 ZNF138P52744 262 aa8.53□□□□□ -1.04
HDLBP-246ENST00000496569 TAS2R45P59539 299 aa8.53□□□□□ -1.04
HDLBP-246ENST00000496569 SSX7Q7RTT5 188 aa8.53□□□□□ -1.04
HDLBP-246ENST00000496569 EIF4E3Q8N5X7 224 aaKnown RBP8.53□□□□□ -1.04
HDLBP-246ENST00000496569 C15orf53Q8NAA6 179 aa8.53□□□□□ -1.04
HDLBP-246ENST00000496569 OR10G4Q8NGN3 311 aa8.53□□□□□ -1.04
HDLBP-246ENST00000496569 OR10G9Q8NGN4 311 aa8.53□□□□□ -1.04
HDLBP-246ENST00000496569 OR10G7Q8NGN6 311 aa8.53□□□□□ -1.04
HDLBP-246ENST00000496569 MRPL16Q9NX20 251 aaKnown RBP8.53□□□□□ -1.04
HDLBP-246ENST00000496569 TRAV26-1A0A087WT03 109 aa8.52□□□□□ -1.05
HDLBP-246ENST00000496569 TRGV1A0A0A0MS02 117 aa8.52□□□□□ -1.05
HDLBP-246ENST00000496569 TRAV8-1A0A0A6YYK1 113 aa8.52□□□□□ -1.05
HDLBP-246ENST00000496569 A0A1W2PPV4 95 aa8.52□□□□□ -1.05
HDLBP-246ENST00000496569 PGPA6NDG6 321 aa8.52□□□□□ -1.05
HDLBP-246ENST00000496569 DIRC3C9JPN6 131 aa8.52□□□□□ -1.05
HDLBP-246ENST00000496569 G3V3Q6 166 aa8.52□□□□□ -1.05
HDLBP-246ENST00000496569 ARL14EPLP0DKL9 152 aa8.52□□□□□ -1.05
HDLBP-246ENST00000496569 CSN1S1P47710 185 aa8.52□□□□□ -1.05
HDLBP-246ENST00000496569 CDC34P49427 236 aaPredicted RBP8.52□□□□□ -1.05
HDLBP-246ENST00000496569 RPL7L1Q6DKI1 246 aaKnown RBP8.52□□□□□ -1.05
HDLBP-246ENST00000496569 SGK494Q96LW2 274 aa8.52□□□□□ -1.05
HDLBP-246ENST00000496569 ATG101Q9BSB4 218 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms