RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 TTTY12Q9BZ98 90 aa7.17□□□□□ -1.26
HPS4-217ENST00000496385 FBXL15Q9H469 300 aa7.17□□□□□ -1.26
HPS4-217ENST00000496385 CACNA1DQ01668 2161 aa7.17□□□□□ -1.26
HPS4-217ENST00000496385 CKS2P33552 79 aa7.17□□□□□ -1.26
HPS4-217ENST00000496385 TMEM30BQ3MIR4 351 aa7.17□□□□□ -1.26
HPS4-217ENST00000496385 GTSCR1Q86UQ5 136 aa7.17□□□□□ -1.26
HPS4-217ENST00000496385 TRGV9Q99603 122 aa7.17□□□□□ -1.26
HPS4-217ENST00000496385 DYSFO75923 2080 aa7.17□□□□□ -1.26
HPS4-217ENST00000496385 WNT9BO14905 357 aa7.16□□□□□ -1.26
HPS4-217ENST00000496385 PLNP26678 52 aa7.16□□□□□ -1.26
HPS4-217ENST00000496385 PRNTQ86SH4 94 aa7.16□□□□□ -1.26
HPS4-217ENST00000496385 NPIPB3Q92617 1050 aa7.16□□□□□ -1.26
HPS4-217ENST00000496385 FAM173AQ9BQD7 235 aa7.16□□□□□ -1.26
HPS4-217ENST00000496385 DIAPH2-AS1Q14236 149 aa7.16□□□□□ -1.26
HPS4-217ENST00000496385 MRPL23Q16540 153 aaKnown RBP7.16□□□□□ -1.26
HPS4-217ENST00000496385 LYPD1Q8N2G4 141 aa7.16□□□□□ -1.26
HPS4-217ENST00000496385 SPANXDQ9BXN6 97 aa7.16□□□□□ -1.26
HPS4-217ENST00000496385 TTTY13Q9BZ97 58 aa7.16□□□□□ -1.26
HPS4-217ENST00000496385 TENM4Q6N022 2769 aa7.16□□□□□ -1.26
HPS4-217ENST00000496385 UTP20O75691 2785 aaKnown RBP7.15□□□□□ -1.26
HPS4-217ENST00000496385 SAA2P0DJI9 122 aaPredicted RBP7.15□□□□□ -1.26
HPS4-217ENST00000496385 MYOD1P15172 320 aa7.15□□□□□ -1.26
HPS4-217ENST00000496385 PRDX2P32119 198 aa7.15□□□□□ -1.26
HPS4-217ENST00000496385 MZT1Q08AG7 82 aa7.15□□□□□ -1.26
HPS4-217ENST00000496385 PPP1R27Q86WC6 154 aa7.15□□□□□ -1.26
HPS4-217ENST00000496385 TUSC5Q8IXB3 177 aa7.15□□□□□ -1.26
HPS4-217ENST00000496385 AMN1Q8IY45 258 aa7.15□□□□□ -1.26
HPS4-217ENST00000496385 FAM169BQ8N8A8 192 aa7.15□□□□□ -1.26
HPS4-217ENST00000496385 MAPKAPK5-AS1Q8N8E1 139 aa7.15□□□□□ -1.26
HPS4-217ENST00000496385 OR10J6PQ8NGY7 276 aa7.15□□□□□ -1.26
HPS4-217ENST00000496385 GCN1Q92616 2671 aaKnown RBP7.15□□□□□ -1.26
HPS4-217ENST00000496385 CCDC179H3BU77 68 aa7.15□□□□□ -1.26
HPS4-217ENST00000496385 NPYP01303 97 aa7.15□□□□□ -1.26
HPS4-217ENST00000496385 CGB3P0DN86 165 aa7.15□□□□□ -1.26
HPS4-217ENST00000496385 CGB7P0DN87 165 aa7.15□□□□□ -1.26
HPS4-217ENST00000496385 PSMB2P49721 201 aa7.15□□□□□ -1.26
HPS4-217ENST00000496385 UBE2D1P51668 147 aa7.15□□□□□ -1.26
HPS4-217ENST00000496385 FOXG1P55316 489 aaPredicted RBP7.15□□□□□ -1.26
HPS4-217ENST00000496385 OBP2BQ9NPH6 170 aa7.15□□□□□ -1.26
HPS4-217ENST00000496385 MDFICQ9P1T7 246 aa7.15□□□□□ -1.26
HPS4-217ENST00000496385 SCGB1C2P0DMR2 95 aa7.14□□□□□ -1.27
HPS4-217ENST00000496385 LEPP41159 167 aa7.14□□□□□ -1.27
HPS4-217ENST00000496385 C5orf47Q569G3 176 aa7.14□□□□□ -1.27
HPS4-217ENST00000496385 OR4C13Q8NGP0 309 aa7.14□□□□□ -1.27
HPS4-217ENST00000496385 FOXC2Q99958 501 aa7.14□□□□□ -1.27
HPS4-217ENST00000496385 RASL11BQ9BPW5 248 aa7.14□□□□□ -1.27
HPS4-217ENST00000496385 DCTN5Q9BTE1 182 aa7.14□□□□□ -1.27
HPS4-217ENST00000496385 CALYQ9NYX4 217 aa7.14□□□□□ -1.27
HPS4-217ENST00000496385 METRNQ9UJH8 293 aa7.14□□□□□ -1.27
HPS4-217ENST00000496385 VPREB3Q9UKI3 123 aa7.14□□□□□ -1.27
HPS4-217ENST00000496385 FASNP49327 2511 aaKnown RBP7.14□□□□□ -1.27
HPS4-217ENST00000496385 EDDM3AQ14507 147 aa7.14□□□□□ -1.27
HPS4-217ENST00000496385 LYZL1Q6UWQ5 148 aa7.14□□□□□ -1.27
HPS4-217ENST00000496385 C1orf229Q6ZS94 237 aaPredicted RBP7.14□□□□□ -1.27
HPS4-217ENST00000496385 MDP1Q86V88 176 aa7.14□□□□□ -1.27
HPS4-217ENST00000496385 CD177Q8N6Q3 437 aa7.14□□□□□ -1.27
HPS4-217ENST00000496385 LINC01600Q96MT4 127 aa7.14□□□□□ -1.27
HPS4-217ENST00000496385 SPANXCQ9NY87 97 aa7.14□□□□□ -1.27
HPS4-217ENST00000496385 HELZ2Q9BYK8 2649 aaKnown RBP7.14□□□□□ -1.27
HPS4-217ENST00000496385 PCNX1Q96RV3 2341 aa7.14□□□□□ -1.27
HPS4-217ENST00000496385 ORM2P19652 201 aa7.14□□□□□ -1.27
HPS4-217ENST00000496385 GOLT1AQ6ZVE7 132 aa7.14□□□□□ -1.27
HPS4-217ENST00000496385 OR11H6Q8NGC7 330 aa7.14□□□□□ -1.27
HPS4-217ENST00000496385 FLYWCH2Q96CP2 140 aaKnown RBP7.14□□□□□ -1.27
HPS4-217ENST00000496385 AJUBAQ96IF1 538 aa7.14□□□□□ -1.27
HPS4-217ENST00000496385 A0A1W2PPI3 338 aa7.13□□□□□ -1.27
HPS4-217ENST00000496385 PVRIGQ6DKI7 326 aa7.13□□□□□ -1.27
HPS4-217ENST00000496385 GFRALQ6UXV0 394 aa7.13□□□□□ -1.27
HPS4-217ENST00000496385 ZNF826PQ6ZT77 177 aa7.13□□□□□ -1.27
HPS4-217ENST00000496385 COX8CQ7Z4L0 72 aa7.13□□□□□ -1.27
HPS4-217ENST00000496385 MYOZ3Q8TDC0 251 aa7.13□□□□□ -1.27
HPS4-217ENST00000496385 NRGNQ92686 78 aa7.13□□□□□ -1.27
HPS4-217ENST00000496385 TRAV12-1A0A0B4J245 112 aa7.13□□□□□ -1.27
HPS4-217ENST00000496385 TRAV40A0A0B4J280 105 aa7.13□□□□□ -1.27
HPS4-217ENST00000496385 SAA1P0DJI8 122 aaPredicted RBP7.13□□□□□ -1.27
HPS4-217ENST00000496385 GNLYP22749 145 aa7.13□□□□□ -1.27
HPS4-217ENST00000496385 HEATR1Q9H583 2144 aaKnown RBP7.13□□□□□ -1.27
HPS4-217ENST00000496385 TMEM160Q9NX00 188 aa7.13□□□□□ -1.27
HPS4-217ENST00000496385 SPRR3Q9UBC9 169 aa7.13□□□□□ -1.27
HPS4-217ENST00000496385 TRAV8-1A0A0A6YYK1 113 aa7.12□□□□□ -1.27
HPS4-217ENST00000496385 LINC01549A6NIU2 74 aa7.12□□□□□ -1.27
HPS4-217ENST00000496385 PLAUP00749 431 aa7.12□□□□□ -1.27
HPS4-217ENST00000496385 PRTN3P24158 256 aa7.12□□□□□ -1.27
HPS4-217ENST00000496385 FXYD7P58549 80 aa7.12□□□□□ -1.27
HPS4-217ENST00000496385 SRSF2Q01130 221 aaKnown RBP7.12□□□□□ -1.27
HPS4-217ENST00000496385 Q8N8P6 123 aa7.12□□□□□ -1.27
HPS4-217ENST00000496385 PTH2Q96A98 100 aa7.12□□□□□ -1.27
HPS4-217ENST00000496385 AGRNO00468 2067 aa7.12□□□□□ -1.27
HPS4-217ENST00000496385 LOC107984156A0A0G2JMH3 177 aa7.12□□□□□ -1.27
HPS4-217ENST00000496385 TMEM213A2RRL7 107 aa7.12□□□□□ -1.27
HPS4-217ENST00000496385 PLGLAQ15195 96 aa7.12□□□□□ -1.27
HPS4-217ENST00000496385 ALKBH6Q3KRA9 238 aa7.12□□□□□ -1.27
HPS4-217ENST00000496385 ARL17AQ8IVW1 177 aa7.12□□□□□ -1.27
HPS4-217ENST00000496385 ANKRD29Q8N6D5 301 aa7.12□□□□□ -1.27
HPS4-217ENST00000496385 TMEM167AQ8TBQ9 72 aa7.12□□□□□ -1.27
HPS4-217ENST00000496385 CITED2Q99967 270 aaPredicted RBP7.12□□□□□ -1.27
HPS4-217ENST00000496385 HIVEP3Q5T1R4 2406 aa7.12□□□□□ -1.27
HPS4-217ENST00000496385 TRGV5A0A0B4J1U4 118 aa7.11□□□□□ -1.27
HPS4-217ENST00000496385 K7EMI3 77 aa7.11□□□□□ -1.27
HPS4-217ENST00000496385 WIPF1O43516 503 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms