RNA–Protein interactions for RNA: ENST00000496318.5

HLA-DQA1-207, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

Gene HLA-DQA1, Length 696 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-207ENST00000496318 FXYD5Q96DB9 178 aa8.13□□□□□ -1.11
HLA-DQA1-207ENST00000496318 C16orf74Q96GX8 76 aa8.13□□□□□ -1.11
HLA-DQA1-207ENST00000496318 AGPAT4-IT1Q9H0P7 198 aa8.13□□□□□ -1.11
HLA-DQA1-207ENST00000496318 TIMM9Q9Y5J7 89 aa8.13□□□□□ -1.11
HLA-DQA1-207ENST00000496318 A0A0J9YY99 117 aa8.12□□□□□ -1.11
HLA-DQA1-207ENST00000496318 A0A1B0GVY2 172 aa8.12□□□□□ -1.11
HLA-DQA1-207ENST00000496318 H7BYZ3 331 aa8.12□□□□□ -1.11
HLA-DQA1-207ENST00000496318 HOXA5P20719 270 aa8.12□□□□□ -1.11
HLA-DQA1-207ENST00000496318 RNASE4P34096 147 aaKnown RBP8.12□□□□□ -1.11
HLA-DQA1-207ENST00000496318 FFAR4Q5NUL3 377 aa8.12□□□□□ -1.11
HLA-DQA1-207ENST00000496318 Q6ZTI0 123 aa8.12□□□□□ -1.11
HLA-DQA1-207ENST00000496318 CHAC2Q8WUX2 184 aa8.12□□□□□ -1.11
HLA-DQA1-207ENST00000496318 SLC25A31Q9H0C2 315 aa8.12□□□□□ -1.11
HLA-DQA1-207ENST00000496318 TMEM14CQ9P0S9 112 aa8.12□□□□□ -1.11
HLA-DQA1-207ENST00000496318 TP53TG3Q9ULZ0 132 aa8.12□□□□□ -1.11
HLA-DQA1-207ENST00000496318 HSPB11Q9Y547 144 aa8.12□□□□□ -1.11
HLA-DQA1-207ENST00000496318 TIMM8BQ9Y5J9 83 aaPredicted RBP8.12□□□□□ -1.11
HLA-DQA1-207ENST00000496318 ALG5Q9Y673 324 aa8.12□□□□□ -1.11
HLA-DQA1-207ENST00000496318 PRSS29PA6NIE9 313 aa8.11□□□□□ -1.11
HLA-DQA1-207ENST00000496318 RLN2P04090 185 aa8.11□□□□□ -1.11
HLA-DQA1-207ENST00000496318 ATP5G1P05496 136 aa8.11□□□□□ -1.11
HLA-DQA1-207ENST00000496318 LEPP41159 167 aa8.11□□□□□ -1.11
HLA-DQA1-207ENST00000496318 ATP5G3P48201 142 aa8.11□□□□□ -1.11
HLA-DQA1-207ENST00000496318 GUK1Q16774 197 aa8.11□□□□□ -1.11
HLA-DQA1-207ENST00000496318 Q6ZR54 194 aa8.11□□□□□ -1.11
HLA-DQA1-207ENST00000496318 ATP5SQ99766 215 aa8.11□□□□□ -1.11
HLA-DQA1-207ENST00000496318 PAXXQ9BUH6 204 aa8.11□□□□□ -1.11
HLA-DQA1-207ENST00000496318 TMPRSS5Q9H3S3 457 aa8.11□□□□□ -1.11
HLA-DQA1-207ENST00000496318 GSN-AS1Q9NRJ2 163 aa8.11□□□□□ -1.11
HLA-DQA1-207ENST00000496318 TRAV26-1A0A087WT03 109 aa8.1□□□□□ -1.11
HLA-DQA1-207ENST00000496318 C7orf71A4D174 169 aa8.1□□□□□ -1.11
HLA-DQA1-207ENST00000496318 HMGB3O15347 200 aaKnown RBP8.1□□□□□ -1.11
HLA-DQA1-207ENST00000496318 OR7C2O60412 319 aa8.1□□□□□ -1.11
HLA-DQA1-207ENST00000496318 ZNF253O75346 499 aa8.1□□□□□ -1.11
HLA-DQA1-207ENST00000496318 MPDU1O75352 247 aa8.1□□□□□ -1.11
HLA-DQA1-207ENST00000496318 NBEAP1P0C6P0 100 aa8.1□□□□□ -1.11
HLA-DQA1-207ENST00000496318 OR5I1Q13606 314 aa8.1□□□□□ -1.11
HLA-DQA1-207ENST00000496318 ZFAND2AQ8N6M9 145 aa8.1□□□□□ -1.11
HLA-DQA1-207ENST00000496318 C11orf72Q8NBR9 251 aa8.1□□□□□ -1.11
HLA-DQA1-207ENST00000496318 FAM210BQ96KR6 192 aa8.1□□□□□ -1.11
HLA-DQA1-207ENST00000496318 FAM19A4Q96LR4 140 aa8.1□□□□□ -1.11
HLA-DQA1-207ENST00000496318 KRTAP17-1Q9BYP8 105 aa8.1□□□□□ -1.11
HLA-DQA1-207ENST00000496318 OR51M1Q9H341 326 aa8.1□□□□□ -1.11
HLA-DQA1-207ENST00000496318 RPH3ALQ9UNE2 315 aa8.1□□□□□ -1.11
HLA-DQA1-207ENST00000496318 RNF24Q9Y225 148 aa8.1□□□□□ -1.11
HLA-DQA1-207ENST00000496318 FUT9Q9Y231 359 aa8.1□□□□□ -1.11
HLA-DQA1-207ENST00000496318 LINC00588Q9Y4M8 146 aa8.1□□□□□ -1.11
HLA-DQA1-207ENST00000496318 KLF12Q9Y4X4 402 aa8.1□□□□□ -1.11
HLA-DQA1-207ENST00000496318 CBY3A6NI87 242 aa8.09□□□□□ -1.11
HLA-DQA1-207ENST00000496318 KLLNB2CW77 178 aa8.09□□□□□ -1.11
HLA-DQA1-207ENST00000496318 RPL12P30050 165 aaKnown RBP8.09□□□□□ -1.11
HLA-DQA1-207ENST00000496318 DEFA1P59665 94 aa8.09□□□□□ -1.11
HLA-DQA1-207ENST00000496318 DEFA3P59666 94 aa8.09□□□□□ -1.11
HLA-DQA1-207ENST00000496318 RAB2AP61019 212 aa8.09□□□□□ -1.11
HLA-DQA1-207ENST00000496318 UBE2L3P68036 154 aaKnown RBP8.09□□□□□ -1.11
HLA-DQA1-207ENST00000496318 Q5BKY6 102 aa8.09□□□□□ -1.11
HLA-DQA1-207ENST00000496318 LINC00612Q8N6U2 182 aa8.09□□□□□ -1.11
HLA-DQA1-207ENST00000496318 ODF3Q96PU9 254 aa8.09□□□□□ -1.11
HLA-DQA1-207ENST00000496318 ATG101Q9BSB4 218 aa8.09□□□□□ -1.11
HLA-DQA1-207ENST00000496318 PCLOQ9Y6V0 5065 aa8.09□□□□□ -1.11
HLA-DQA1-207ENST00000496318 SNURFLB1AK76 121 aa8.08□□□□□ -1.12
HLA-DQA1-207ENST00000496318 ZNF324O75467 553 aaPredicted RBP8.08□□□□□ -1.12
HLA-DQA1-207ENST00000496318 IGHV3-53P01767 116 aa8.08□□□□□ -1.12
HLA-DQA1-207ENST00000496318 RANP62826 216 aaKnown RBP8.08□□□□□ -1.12
HLA-DQA1-207ENST00000496318 CYCSP99999 105 aaKnown RBP8.08□□□□□ -1.12
HLA-DQA1-207ENST00000496318 PDE6HQ13956 83 aa8.08□□□□□ -1.12
HLA-DQA1-207ENST00000496318 LGALS9BQ3B8N2 356 aa8.08□□□□□ -1.12
HLA-DQA1-207ENST00000496318 MUC21Q5SSG8 566 aa8.08□□□□□ -1.12
HLA-DQA1-207ENST00000496318 ZNF493Q6ZR52 646 aa8.08□□□□□ -1.12
HLA-DQA1-207ENST00000496318 ZNF575Q86XF7 245 aa8.08□□□□□ -1.12
HLA-DQA1-207ENST00000496318 CCDC28AQ8IWP9 274 aa8.08□□□□□ -1.12
HLA-DQA1-207ENST00000496318 C15orf53Q8NAA6 179 aa8.08□□□□□ -1.12
HLA-DQA1-207ENST00000496318 MRPL53Q96EL3 112 aaKnown RBP8.08□□□□□ -1.12
HLA-DQA1-207ENST00000496318 HYLS1Q96M11 299 aa8.08□□□□□ -1.12
HLA-DQA1-207ENST00000496318 C20orf144Q9BQM9 153 aa8.08□□□□□ -1.12
HLA-DQA1-207ENST00000496318 KRTAP1-5Q9BYS1 174 aa8.08□□□□□ -1.12
HLA-DQA1-207ENST00000496318 Q9H3A6 140 aa8.08□□□□□ -1.12
HLA-DQA1-207ENST00000496318 AAMDCQ9H7C9 122 aa8.08□□□□□ -1.12
HLA-DQA1-207ENST00000496318 MRPL16Q9NX20 251 aaKnown RBP8.08□□□□□ -1.12
HLA-DQA1-207ENST00000496318 TRGV1A0A0A0MS02 117 aa8.07□□□□□ -1.12
HLA-DQA1-207ENST00000496318 SLC25A5P05141 298 aaKnown RBP8.07□□□□□ -1.12
HLA-DQA1-207ENST00000496318 GPX1P07203 203 aa8.07□□□□□ -1.12
HLA-DQA1-207ENST00000496318 GNG5P63218 68 aa8.07□□□□□ -1.12
HLA-DQA1-207ENST00000496318 C9orf47Q6ZRZ4 202 aa8.07□□□□□ -1.12
HLA-DQA1-207ENST00000496318 ZNRF2Q8NHG8 242 aa8.07□□□□□ -1.12
HLA-DQA1-207ENST00000496318 MRPL32Q9BYC8 188 aaKnown RBP8.07□□□□□ -1.12
HLA-DQA1-207ENST00000496318 ZNF492Q9P255 531 aa8.07□□□□□ -1.12
HLA-DQA1-207ENST00000496318 C17orf112F2Z3M2 114 aa8.06□□□□□ -1.12
HLA-DQA1-207ENST00000496318 RNF212Q495C1 297 aa8.06□□□□□ -1.12
HLA-DQA1-207ENST00000496318 TMEM78Q5T7P6 136 aa8.06□□□□□ -1.12
HLA-DQA1-207ENST00000496318 SSX7Q7RTT5 188 aa8.06□□□□□ -1.12
HLA-DQA1-207ENST00000496318 GNPNAT1Q96EK6 184 aaPredicted RBP8.06□□□□□ -1.12
HLA-DQA1-207ENST00000496318 PYGO2Q9BRQ0 406 aa8.06□□□□□ -1.12
HLA-DQA1-207ENST00000496318 PRELID1Q9Y255 219 aa8.06□□□□□ -1.12
HLA-DQA1-207ENST00000496318 RYR1P21817 5038 aa8.05□□□□□ -1.12
HLA-DQA1-207ENST00000496318 TRAV8-1A0A0A6YYK1 113 aa8.05□□□□□ -1.12
HLA-DQA1-207ENST00000496318 F6UZH7 168 aa8.05□□□□□ -1.12
HLA-DQA1-207ENST00000496318 IFNA5P01569 189 aa8.05□□□□□ -1.12
HLA-DQA1-207ENST00000496318 CRISP2P16562 243 aa8.05□□□□□ -1.12
HLA-DQA1-207ENST00000496318 LINC00336Q6ZUF6 198 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms