RNA–Protein interactions for RNA: ENST00000496049.1

GAPDH-210, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 2

Gene GAPDH, Length 390 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-210ENST00000496049 C2CD4CQ8TF44 421 aa11.16□□□□□ -0.62
GAPDH-210ENST00000496049 WWC2-AS2Q96NR7 200 aa11.16□□□□□ -0.62
GAPDH-210ENST00000496049 SAV1Q9H4B6 383 aaPredicted RBP11.16□□□□□ -0.62
GAPDH-210ENST00000496049 RPL35P42766 123 aaKnown RBP11.15□□□□□ -0.62
GAPDH-210ENST00000496049 TMEM183BQ1AE95 376 aa11.15□□□□□ -0.62
GAPDH-210ENST00000496049 OXLD1Q5BKU9 147 aa11.15□□□□□ -0.62
GAPDH-210ENST00000496049 SMIM7Q9BQ49 75 aa11.15□□□□□ -0.62
GAPDH-210ENST00000496049 PARLQ9H300 379 aa11.15□□□□□ -0.62
GAPDH-210ENST00000496049 PPP1R14DQ9NXH3 145 aa11.15□□□□□ -0.62
GAPDH-210ENST00000496049 ZNF727A8MUV8 499 aa11.14□□□□□ -0.63
GAPDH-210ENST00000496049 PRAC2D3DTV9 90 aa11.14□□□□□ -0.63
GAPDH-210ENST00000496049 NPIPB6E9PJ23 425 aa11.14□□□□□ -0.63
GAPDH-210ENST00000496049 GNG4P50150 75 aa11.14□□□□□ -0.63
GAPDH-210ENST00000496049 TAS2R60P59551 318 aa11.14□□□□□ -0.63
GAPDH-210ENST00000496049 FLI1Q01543 452 aaPredicted RBP11.14□□□□□ -0.63
GAPDH-210ENST00000496049 ACTL10Q5JWF8 245 aa11.14□□□□□ -0.63
GAPDH-210ENST00000496049 SAMD5Q5TGI4 173 aa11.14□□□□□ -0.63
GAPDH-210ENST00000496049 Q86TA4 180 aa11.14□□□□□ -0.63
GAPDH-210ENST00000496049 STHQ8IWL8 128 aa11.14□□□□□ -0.63
GAPDH-210ENST00000496049 A0A0J9YX75 114 aa11.13□□□□□ -0.63
GAPDH-210ENST00000496049 TRBV6-1A0A0K0K1D8 114 aa11.13□□□□□ -0.63
GAPDH-210ENST00000496049 C9JQL5 133 aa11.13□□□□□ -0.63
GAPDH-210ENST00000496049 F6UB75 175 aa11.13□□□□□ -0.63
GAPDH-210ENST00000496049 CD7P09564 240 aa11.13□□□□□ -0.63
GAPDH-210ENST00000496049 HLA-DRB4P13762 266 aa11.13□□□□□ -0.63
GAPDH-210ENST00000496049 ZNF138P52744 262 aa11.13□□□□□ -0.63
GAPDH-210ENST00000496049 EGFEM1PQ0D2K5 195 aa11.13□□□□□ -0.63
GAPDH-210ENST00000496049 C9orf47Q6ZRZ4 202 aa11.13□□□□□ -0.63
GAPDH-210ENST00000496049 PRNTQ86SH4 94 aa11.13□□□□□ -0.63
GAPDH-210ENST00000496049 SLC7A5P1Q8MH63 180 aa11.13□□□□□ -0.63
GAPDH-210ENST00000496049 LINC00477Q96M19 166 aa11.13□□□□□ -0.63
GAPDH-210ENST00000496049 DERL1Q9BUN8 251 aa11.13□□□□□ -0.63
GAPDH-210ENST00000496049 PSG8Q9UQ74 426 aa11.13□□□□□ -0.63
GAPDH-210ENST00000496049 KLF12Q9Y4X4 402 aa11.13□□□□□ -0.63
GAPDH-210ENST00000496049 HLA-DRB4X5D2U9 266 aa11.13□□□□□ -0.63
GAPDH-210ENST00000496049 PCLOQ9Y6V0 5065 aa11.13□□□□□ -0.63
GAPDH-210ENST00000496049 TRAV8-1A0A0A6YYK1 113 aa11.12□□□□□ -0.63
GAPDH-210ENST00000496049 TRAV34A0A0B4J273 112 aa11.12□□□□□ -0.63
GAPDH-210ENST00000496049 TMEM218A2RU14 115 aa11.12□□□□□ -0.63
GAPDH-210ENST00000496049 C9JCJ5 164 aa11.12□□□□□ -0.63
GAPDH-210ENST00000496049 F8W036 122 aa11.12□□□□□ -0.63
GAPDH-210ENST00000496049 CENPWQ5EE01 88 aa11.12□□□□□ -0.63
GAPDH-210ENST00000496049 SAPCD1Q5SSQ6 148 aa11.12□□□□□ -0.63
GAPDH-210ENST00000496049 APRG1Q8IVJ8 170 aa11.12□□□□□ -0.63
GAPDH-210ENST00000496049 OR4B1Q8NGF8 309 aa11.12□□□□□ -0.63
GAPDH-210ENST00000496049 SMIM12Q96EX1 92 aa11.12□□□□□ -0.63
GAPDH-210ENST00000496049 VGLL1Q99990 258 aa11.12□□□□□ -0.63
GAPDH-210ENST00000496049 NIPSNAP3BQ9BS92 247 aa11.12□□□□□ -0.63
GAPDH-210ENST00000496049 ZFP30Q9Y2G7 519 aa11.12□□□□□ -0.63
GAPDH-210ENST00000496049 LENEPQ9Y5L5 61 aa11.12□□□□□ -0.63
GAPDH-210ENST00000496049 KNCNA6PVL3 124 aa11.11□□□□□ -0.63
GAPDH-210ENST00000496049 KRBOX1C9JBD0 128 aa11.11□□□□□ -0.63
GAPDH-210ENST00000496049 ZNF705DP0CH99 300 aaPredicted RBP11.11□□□□□ -0.63
GAPDH-210ENST00000496049 ZNF705BP0CI00 300 aaPredicted RBP11.11□□□□□ -0.63
GAPDH-210ENST00000496049 TSPOP30536 169 aa11.11□□□□□ -0.63
GAPDH-210ENST00000496049 LEPP41159 167 aa11.11□□□□□ -0.63
GAPDH-210ENST00000496049 ERCC8Q13216 396 aa11.11□□□□□ -0.63
GAPDH-210ENST00000496049 Q8TAT8 98 aa11.11□□□□□ -0.63
GAPDH-210ENST00000496049 LINC00479Q96M42 142 aa11.11□□□□□ -0.63
GAPDH-210ENST00000496049 ODF3Q96PU9 254 aa11.11□□□□□ -0.63
GAPDH-210ENST00000496049 AURKAIP1Q9NWT8 199 aaPredicted RBP11.11□□□□□ -0.63
GAPDH-210ENST00000496049 TRBV7-9A0A0J9YWB2 115 aa11.1□□□□□ -0.63
GAPDH-210ENST00000496049 LTAP01374 205 aa11.1□□□□□ -0.63
GAPDH-210ENST00000496049 CT45A10P0DMU9 189 aa11.1□□□□□ -0.63
GAPDH-210ENST00000496049 PRB4P10163 310 aaPredicted RBP11.1□□□□□ -0.63
GAPDH-210ENST00000496049 DEFB1P60022 68 aa11.1□□□□□ -0.63
GAPDH-210ENST00000496049 GDF5OSQ5U4N7 250 aa11.1□□□□□ -0.63
GAPDH-210ENST00000496049 BAGE2Q86Y30 109 aa11.1□□□□□ -0.63
GAPDH-210ENST00000496049 SGK494Q96LW2 274 aa11.1□□□□□ -0.63
GAPDH-210ENST00000496049 SEC11CQ9BY50 192 aa11.1□□□□□ -0.63
GAPDH-210ENST00000496049 AGPAT4-IT1Q9H0P7 198 aa11.1□□□□□ -0.63
GAPDH-210ENST00000496049 BIN3Q9NQY0 253 aa11.1□□□□□ -0.63
GAPDH-210ENST00000496049 ZNF492Q9P255 531 aa11.1□□□□□ -0.63
GAPDH-210ENST00000496049 NAT8Q9UHE5 227 aa11.1□□□□□ -0.63
GAPDH-210ENST00000496049 H3BMM0 161 aa11.09□□□□□ -0.63
GAPDH-210ENST00000496049 IGLV2-11P01706 119 aa11.09□□□□□ -0.63
GAPDH-210ENST00000496049 NUTF2P61970 127 aaKnown RBP11.09□□□□□ -0.63
GAPDH-210ENST00000496049 ZNF124Q15973 351 aa11.09□□□□□ -0.63
GAPDH-210ENST00000496049 TMEM241Q24JQ0 296 aa11.09□□□□□ -0.63
GAPDH-210ENST00000496049 IGF2BP2-AS1Q96M15 143 aa11.09□□□□□ -0.63
GAPDH-210ENST00000496049 CLUHP3Q96NS8 147 aa11.09□□□□□ -0.63
GAPDH-210ENST00000496049 PRR25Q96S07 402 aa11.09□□□□□ -0.63
GAPDH-210ENST00000496049 C19orf73Q9NVV2 129 aa11.09□□□□□ -0.63
GAPDH-210ENST00000496049 LY96Q9Y6Y9 160 aa11.09□□□□□ -0.63
GAPDH-210ENST00000496049 DNAH1Q9P2D7 4330 aa11.09□□□□□ -0.63
GAPDH-210ENST00000496049 IGKV3-20P01619 116 aa11.08□□□□□ -0.64
GAPDH-210ENST00000496049 MGST1P10620 155 aaKnown RBP11.08□□□□□ -0.64
GAPDH-210ENST00000496049 TMEM183AQ8IXX5 376 aa11.08□□□□□ -0.64
GAPDH-210ENST00000496049 WFDC10AQ9H1F0 79 aa11.08□□□□□ -0.64
GAPDH-210ENST00000496049 SRD5A3Q9H8P0 318 aa11.08□□□□□ -0.64
GAPDH-210ENST00000496049 AMBPP02760 352 aa11.07□□□□□ -0.64
GAPDH-210ENST00000496049 KRTAP10-11P60412 298 aa11.07□□□□□ -0.64
GAPDH-210ENST00000496049 PNRC1Q12796 327 aaPredicted RBP11.07□□□□□ -0.64
GAPDH-210ENST00000496049 SMUG1Q53HV7 270 aa11.07□□□□□ -0.64
GAPDH-210ENST00000496049 TRPT1Q86TN4 253 aaKnown RBP11.07□□□□□ -0.64
GAPDH-210ENST00000496049 DEFB125Q8N687 156 aa11.07□□□□□ -0.64
GAPDH-210ENST00000496049 TUBA4BQ9H853 241 aa11.07□□□□□ -0.64
GAPDH-210ENST00000496049 RYR1P21817 5038 aa11.07□□□□□ -0.64
GAPDH-210ENST00000496049 TRBV20OR9-2A0A075B6H5 130 aa11.06□□□□□ -0.64
GAPDH-210ENST00000496049 A8MTW9 85 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms