RNA–Protein interactions for RNA: ENST00000495835.1

HLA-C-209, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,073 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-209ENST00000495835 LYPD1Q8N2G4 141 aa17.04■□□□□ 0.32
HLA-C-209ENST00000495835 EXOC3-AS1Q8N2X6 119 aa17.04■□□□□ 0.32
HLA-C-209ENST00000495835 AGPAT4-IT1Q9H0P7 198 aa17.04■□□□□ 0.32
HLA-C-209ENST00000495835 DNAH17Q9UFH2 4485 aa17.04■□□□□ 0.32
HLA-C-209ENST00000495835 C7orf71A4D174 169 aa17.03■□□□□ 0.32
HLA-C-209ENST00000495835 CRISP2P16562 243 aa17.03■□□□□ 0.32
HLA-C-209ENST00000495835 SCGB1C1Q8TD33 95 aa17.03■□□□□ 0.32
HLA-C-209ENST00000495835 RNF141Q8WVD5 230 aa17.03■□□□□ 0.32
HLA-C-209ENST00000495835 FXYD5Q96DB9 178 aa17.03■□□□□ 0.32
HLA-C-209ENST00000495835 TRBV7-9A0A0J9YWB2 115 aa17.02■□□□□ 0.32
HLA-C-209ENST00000495835 DAZ2Q13117 558 aaKnown RBP17.02■□□□□ 0.32
HLA-C-209ENST00000495835 ERCC8Q13216 396 aa17.02■□□□□ 0.32
HLA-C-209ENST00000495835 TMEM78Q5T7P6 136 aa17.02■□□□□ 0.32
HLA-C-209ENST00000495835 FAT2Q9NYQ8 4349 aa17.01■□□□□ 0.31
HLA-C-209ENST00000495835 J3KRW8 73 aa17.01■□□□□ 0.31
HLA-C-209ENST00000495835 ZNF324O75467 553 aaPredicted RBP17.01■□□□□ 0.31
HLA-C-209ENST00000495835 ZNF680Q8NEM1 530 aa17.01■□□□□ 0.31
HLA-C-209ENST00000495835 MBD2Q9UBB5 411 aa17.01■□□□□ 0.31
HLA-C-209ENST00000495835 TAS2R45P59539 299 aa17■□□□□ 0.31
HLA-C-209ENST00000495835 ANXA2RQ3ZCQ2 193 aa17■□□□□ 0.31
HLA-C-209ENST00000495835 FFAR4Q5NUL3 377 aa17■□□□□ 0.31
HLA-C-209ENST00000495835 Q6ZR54 194 aa17■□□□□ 0.31
HLA-C-209ENST00000495835 NACAE9PAV3 2078 aa17■□□□□ 0.31
HLA-C-209ENST00000495835 OR7C2O60412 319 aa16.99■□□□□ 0.31
HLA-C-209ENST00000495835 PTTG1O95997 202 aa16.99■□□□□ 0.31
HLA-C-209ENST00000495835 GPX1P07203 203 aa16.99■□□□□ 0.31
HLA-C-209ENST00000495835 FAM122CQ6P4D5 195 aa16.99■□□□□ 0.31
HLA-C-209ENST00000495835 ATG101Q9BSB4 218 aa16.99■□□□□ 0.31
HLA-C-209ENST00000495835 ZNF492Q9P255 531 aa16.99■□□□□ 0.31
HLA-C-209ENST00000495835 RBAKDNA6NC62 111 aa16.98■□□□□ 0.31
HLA-C-209ENST00000495835 M0R2N4 97 aa16.98■□□□□ 0.31
HLA-C-209ENST00000495835 OR10J4P0C629 311 aa16.98■□□□□ 0.31
HLA-C-209ENST00000495835 CSN1S1P47710 185 aa16.98■□□□□ 0.31
HLA-C-209ENST00000495835 KHDC3LQ587J8 217 aa16.98■□□□□ 0.31
HLA-C-209ENST00000495835 EIF4E3Q8N5X7 224 aaKnown RBP16.98■□□□□ 0.31
HLA-C-209ENST00000495835 ZNF503Q96F45 646 aa16.98■□□□□ 0.31
HLA-C-209ENST00000495835 C18orf15Q96N68 181 aa16.97■□□□□ 0.31
HLA-C-209ENST00000495835 IGKV2-40A0A087WW87 121 aaPredicted RBP16.96■□□□□ 0.31
HLA-C-209ENST00000495835 H3BNG1 76 aa16.96■□□□□ 0.31
HLA-C-209ENST00000495835 IGKV2D-40P01614 121 aaPredicted RBP16.96■□□□□ 0.31
HLA-C-209ENST00000495835 ZNF138P52744 262 aa16.96■□□□□ 0.31
HLA-C-209ENST00000495835 CCL18P55774 89 aa16.96■□□□□ 0.31
HLA-C-209ENST00000495835 CD300CQ08708 224 aa16.96■□□□□ 0.31
HLA-C-209ENST00000495835 ZFAND2AQ8N6M9 145 aa16.96■□□□□ 0.31
HLA-C-209ENST00000495835 PHYHIPLQ96FC7 376 aa16.96■□□□□ 0.31
HLA-C-209ENST00000495835 VGLL1Q99990 258 aa16.96■□□□□ 0.31
HLA-C-209ENST00000495835 SMIM3Q9BZL3 60 aa16.96■□□□□ 0.31
HLA-C-209ENST00000495835 ALG5Q9Y673 324 aa16.96■□□□□ 0.31
HLA-C-209ENST00000495835 RTL8CO15255 209 aa16.95■□□□□ 0.3
HLA-C-209ENST00000495835 NUDT3O95989 172 aa16.95■□□□□ 0.3
HLA-C-209ENST00000495835 RNASE4P34096 147 aaKnown RBP16.95■□□□□ 0.3
HLA-C-209ENST00000495835 RANP62826 216 aaKnown RBP16.95■□□□□ 0.3
HLA-C-209ENST00000495835 UBE2L3P68036 154 aaKnown RBP16.95■□□□□ 0.3
HLA-C-209ENST00000495835 BTN1A1Q13410 526 aa16.95■□□□□ 0.3
HLA-C-209ENST00000495835 SOHLH1Q5JUK2 328 aa16.95■□□□□ 0.3
HLA-C-209ENST00000495835 RXFP4Q8TDU9 374 aa16.95■□□□□ 0.3
HLA-C-209ENST00000495835 IGLV2-18A0A075B6J9 118 aa16.94■□□□□ 0.3
HLA-C-209ENST00000495835 GAGE12BA1L429 117 aa16.94■□□□□ 0.3
HLA-C-209ENST00000495835 GAGE7O76087 117 aa16.94■□□□□ 0.3
HLA-C-209ENST00000495835 GAGE12FP0CL80 117 aa16.94■□□□□ 0.3
HLA-C-209ENST00000495835 GAGE12GP0CL81 117 aa16.94■□□□□ 0.3
HLA-C-209ENST00000495835 GAGE12IP0CL82 117 aa16.94■□□□□ 0.3
HLA-C-209ENST00000495835 M6PRP20645 277 aa16.94■□□□□ 0.3
HLA-C-209ENST00000495835 ACOT6Q3I5F7 207 aaPredicted RBP16.94■□□□□ 0.3
HLA-C-209ENST00000495835 IBA57Q5T440 356 aaKnown RBP16.94■□□□□ 0.3
HLA-C-209ENST00000495835 ARL6IP6Q8N6S5 226 aa16.94■□□□□ 0.3
HLA-C-209ENST00000495835 C11orf72Q8NBR9 251 aa16.94■□□□□ 0.3
HLA-C-209ENST00000495835 Q9H3A6 140 aa16.94■□□□□ 0.3
HLA-C-209ENST00000495835 LENEPQ9Y5L5 61 aa16.94■□□□□ 0.3
HLA-C-209ENST00000495835 OR5I1Q13606 314 aa16.93■□□□□ 0.3
HLA-C-209ENST00000495835 PQLC2Q6ZP29 291 aa16.93■□□□□ 0.3
HLA-C-209ENST00000495835 ASB13Q8WXK3 278 aa16.93■□□□□ 0.3
HLA-C-209ENST00000495835 GNPNAT1Q96EK6 184 aaPredicted RBP16.93■□□□□ 0.3
HLA-C-209ENST00000495835 WFDC1Q9HC57 220 aa16.93■□□□□ 0.3
HLA-C-209ENST00000495835 PRSS29PA6NIE9 313 aa16.92■□□□□ 0.3
HLA-C-209ENST00000495835 GSN-AS1Q9NRJ2 163 aa16.92■□□□□ 0.3
HLA-C-209ENST00000495835 A0A1B0GVY2 172 aa16.91■□□□□ 0.3
HLA-C-209ENST00000495835 A0A1W2PPV4 95 aa16.91■□□□□ 0.3
HLA-C-209ENST00000495835 TCL1AP56279 114 aa16.91■□□□□ 0.3
HLA-C-209ENST00000495835 ZNF266Q14584 549 aa16.91■□□□□ 0.3
HLA-C-209ENST00000495835 FAM74A1Q5RGS3 127 aa16.91■□□□□ 0.3
HLA-C-209ENST00000495835 Q6ZTI0 123 aa16.91■□□□□ 0.3
HLA-C-209ENST00000495835 TMED6Q8WW62 240 aa16.91■□□□□ 0.3
HLA-C-209ENST00000495835 MED28Q9H204 178 aa16.91■□□□□ 0.3
HLA-C-209ENST00000495835 IGHV1OR15-1A0A075B7D0 117 aa16.9■□□□□ 0.3
HLA-C-209ENST00000495835 TRAV26-1A0A087WT03 109 aa16.9■□□□□ 0.3
HLA-C-209ENST00000495835 RGS13O14921 159 aa16.9■□□□□ 0.3
HLA-C-209ENST00000495835 ZNRF2Q8NHG8 242 aa16.9■□□□□ 0.3
HLA-C-209ENST00000495835 OTORQ9NRC9 128 aa16.9■□□□□ 0.3
HLA-C-209ENST00000495835 DIRC3C9JPN6 131 aa16.89■□□□□ 0.29
HLA-C-209ENST00000495835 SPINK4O60575 86 aa16.89■□□□□ 0.29
HLA-C-209ENST00000495835 HOXA5P20719 270 aa16.89■□□□□ 0.29
HLA-C-209ENST00000495835 C1orf134Q5TEV5 83 aa16.89■□□□□ 0.29
HLA-C-209ENST00000495835 AQP10Q96PS8 301 aa16.89■□□□□ 0.29
HLA-C-209ENST00000495835 TRGV2A0A075B6R0 118 aa16.88■□□□□ 0.29
HLA-C-209ENST00000495835 PRR9Q5T870 116 aa16.88■□□□□ 0.29
HLA-C-209ENST00000495835 OR2G3Q8NGZ4 309 aa16.88■□□□□ 0.29
HLA-C-209ENST00000495835 LINC00588Q9Y4M8 146 aa16.88■□□□□ 0.29
HLA-C-209ENST00000495835 PKD1P98161 4303 aa16.87■□□□□ 0.29
HLA-C-209ENST00000495835 OR10G4Q8NGN3 311 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms