RNA–Protein interactions for RNA: ENST00000495680.2

SHROOM1-206, Transcript of shroom family member 1, humanhuman

TSL 3

Gene SHROOM1, Length 281 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-206ENST00000495680 Q6ZRG5 221 aa8.21□□□□□ -1.1
SHROOM1-206ENST00000495680 EXOC3-AS1Q8N2X6 119 aa8.21□□□□□ -1.1
SHROOM1-206ENST00000495680 ZNF680Q8NEM1 530 aa8.21□□□□□ -1.1
SHROOM1-206ENST00000495680 SLC39A9Q9NUM3 307 aa8.21□□□□□ -1.1
SHROOM1-206ENST00000495680 MRPL16Q9NX20 251 aaKnown RBP8.21□□□□□ -1.1
SHROOM1-206ENST00000495680 IGKV2-40A0A087WW87 121 aaPredicted RBP8.2□□□□□ -1.1
SHROOM1-206ENST00000495680 IGSF23A1L1A6 192 aa8.2□□□□□ -1.1
SHROOM1-206ENST00000495680 FAM25EA8MYX2 175 aa8.2□□□□□ -1.1
SHROOM1-206ENST00000495680 PAX4O43316 350 aa8.2□□□□□ -1.1
SHROOM1-206ENST00000495680 ZNF253O75346 499 aa8.2□□□□□ -1.1
SHROOM1-206ENST00000495680 IGKV2D-40P01614 121 aaPredicted RBP8.2□□□□□ -1.1
SHROOM1-206ENST00000495680 TCL1AP56279 114 aa8.2□□□□□ -1.1
SHROOM1-206ENST00000495680 KRTAP10-1P60331 282 aa8.2□□□□□ -1.1
SHROOM1-206ENST00000495680 VWC2Q2TAL6 325 aa8.2□□□□□ -1.1
SHROOM1-206ENST00000495680 ANXA2RQ3ZCQ2 193 aa8.2□□□□□ -1.1
SHROOM1-206ENST00000495680 LYPD1Q8N2G4 141 aa8.2□□□□□ -1.1
SHROOM1-206ENST00000495680 EIF4E3Q8N5X7 224 aaKnown RBP8.2□□□□□ -1.1
SHROOM1-206ENST00000495680 ZFAND2AQ8N6M9 145 aa8.2□□□□□ -1.1
SHROOM1-206ENST00000495680 OR1L4Q8NGR5 311 aa8.2□□□□□ -1.1
SHROOM1-206ENST00000495680 VGLL1Q99990 258 aa8.2□□□□□ -1.1
SHROOM1-206ENST00000495680 LINC00467Q9BRT7 94 aa8.2□□□□□ -1.1
SHROOM1-206ENST00000495680 C20orf85Q9H1P6 137 aa8.2□□□□□ -1.1
SHROOM1-206ENST00000495680 UQCC1Q9NVA1 299 aa8.2□□□□□ -1.1
SHROOM1-206ENST00000495680 MYCBP2O75592 4640 aa8.19□□□□□ -1.1
SHROOM1-206ENST00000495680 PLA2G10O15496 165 aa8.19□□□□□ -1.1
SHROOM1-206ENST00000495680 IL7P13232 177 aa8.19□□□□□ -1.1
SHROOM1-206ENST00000495680 CRISP2P16562 243 aa8.19□□□□□ -1.1
SHROOM1-206ENST00000495680 RPL29P47914 159 aaKnown RBP8.19□□□□□ -1.1
SHROOM1-206ENST00000495680 BAXQ07812 192 aa8.19□□□□□ -1.1
SHROOM1-206ENST00000495680 RAB31Q13636 194 aa8.19□□□□□ -1.1
SHROOM1-206ENST00000495680 LYPD5Q6UWN5 251 aa8.19□□□□□ -1.1
SHROOM1-206ENST00000495680 BLNKQ8WV28 456 aa8.19□□□□□ -1.1
SHROOM1-206ENST00000495680 MRPL53Q96EL3 112 aaKnown RBP8.19□□□□□ -1.1
SHROOM1-206ENST00000495680 ST6GAL2Q96JF0 529 aa8.19□□□□□ -1.1
SHROOM1-206ENST00000495680 C8orf49Q96NF6 230 aa8.19□□□□□ -1.1
SHROOM1-206ENST00000495680 PFDN5Q99471 154 aa8.19□□□□□ -1.1
SHROOM1-206ENST00000495680 SEC22CQ9BRL7 303 aa8.19□□□□□ -1.1
SHROOM1-206ENST00000495680 TMEM14CQ9P0S9 112 aa8.19□□□□□ -1.1
SHROOM1-206ENST00000495680 ICOSQ9Y6W8 199 aa8.19□□□□□ -1.1
SHROOM1-206ENST00000495680 VPS13BQ7Z7G8 4022 aa8.19□□□□□ -1.1
SHROOM1-206ENST00000495680 FLG2Q5D862 2391 aaPredicted RBP8.19□□□□□ -1.1
SHROOM1-206ENST00000495680 A0A087WTM6 91 aa8.18□□□□□ -1.1
SHROOM1-206ENST00000495680 PRAF2O60831 178 aa8.18□□□□□ -1.1
SHROOM1-206ENST00000495680 MPDU1O75352 247 aa8.18□□□□□ -1.1
SHROOM1-206ENST00000495680 INAFM2P0DMQ5 153 aa8.18□□□□□ -1.1
SHROOM1-206ENST00000495680 HIST1H1EP10412 219 aaKnown RBP8.18□□□□□ -1.1
SHROOM1-206ENST00000495680 CRYBA4P53673 196 aa8.18□□□□□ -1.1
SHROOM1-206ENST00000495680 FHL2Q14192 279 aa8.18□□□□□ -1.1
SHROOM1-206ENST00000495680 ICAM4Q14773 271 aa8.18□□□□□ -1.1
SHROOM1-206ENST00000495680 ZNF846Q147U1 533 aa8.18□□□□□ -1.1
SHROOM1-206ENST00000495680 FAM122CQ6P4D5 195 aa8.18□□□□□ -1.1
SHROOM1-206ENST00000495680 C9orf47Q6ZRZ4 202 aa8.18□□□□□ -1.1
SHROOM1-206ENST00000495680 TMEM252Q8N6L7 170 aa8.18□□□□□ -1.1
SHROOM1-206ENST00000495680 LINC00477Q96M19 166 aa8.18□□□□□ -1.1
SHROOM1-206ENST00000495680 SLC25A2Q9BXI2 301 aa8.18□□□□□ -1.1
SHROOM1-206ENST00000495680 PGPEP1Q9NXJ5 209 aa8.18□□□□□ -1.1
SHROOM1-206ENST00000495680 TRAV6A0A075B6T7 132 aa8.17□□□□□ -1.1
SHROOM1-206ENST00000495680 C5orf51A6NDU8 294 aa8.17□□□□□ -1.1
SHROOM1-206ENST00000495680 CENPXA8MT69 81 aa8.17□□□□□ -1.1
SHROOM1-206ENST00000495680 RGS13O14921 159 aa8.17□□□□□ -1.1
SHROOM1-206ENST00000495680 GPX1P07203 203 aa8.17□□□□□ -1.1
SHROOM1-206ENST00000495680 FGF7P21781 194 aa8.17□□□□□ -1.1
SHROOM1-206ENST00000495680 ERVFC1-1P60608 527 aa8.17□□□□□ -1.1
SHROOM1-206ENST00000495680 HAMPP81172 84 aa8.17□□□□□ -1.1
SHROOM1-206ENST00000495680 IBA57Q5T440 356 aaKnown RBP8.17□□□□□ -1.1
SHROOM1-206ENST00000495680 Q5VSD8 79 aa8.17□□□□□ -1.1
SHROOM1-206ENST00000495680 WFDC10BQ8IUB3 73 aa8.17□□□□□ -1.1
SHROOM1-206ENST00000495680 Q8TAT8 98 aa8.17□□□□□ -1.1
SHROOM1-206ENST00000495680 FAM167A-AS1Q96KT0 104 aa8.17□□□□□ -1.1
SHROOM1-206ENST00000495680 LYRM2Q9NU23 88 aaPredicted RBP8.17□□□□□ -1.1
SHROOM1-206ENST00000495680 PRO0255Q9UI72 69 aa8.17□□□□□ -1.1
SHROOM1-206ENST00000495680 HHLA3Q9XRX5 114 aa8.17□□□□□ -1.1
SHROOM1-206ENST00000495680 TIMM9Q9Y5J7 89 aa8.17□□□□□ -1.1
SHROOM1-206ENST00000495680 IGHV1OR15-1A0A075B7D0 117 aa8.16□□□□□ -1.1
SHROOM1-206ENST00000495680 SFTA3P0C7M3 94 aa8.16□□□□□ -1.1
SHROOM1-206ENST00000495680 SULT1A1P50225 295 aa8.16□□□□□ -1.1
SHROOM1-206ENST00000495680 S100A10P60903 97 aa8.16□□□□□ -1.1
SHROOM1-206ENST00000495680 IL15RAQ13261 267 aa8.16□□□□□ -1.1
SHROOM1-206ENST00000495680 RAB32Q13637 225 aa8.16□□□□□ -1.1
SHROOM1-206ENST00000495680 MIR17HGQ75NE6 70 aa8.16□□□□□ -1.1
SHROOM1-206ENST00000495680 C2orf50Q96LR7 162 aa8.16□□□□□ -1.1
SHROOM1-206ENST00000495680 ZNF492Q9P255 531 aa8.16□□□□□ -1.1
SHROOM1-206ENST00000495680 PRELID1Q9Y255 219 aa8.16□□□□□ -1.1
SHROOM1-206ENST00000495680 E5RGE8 158 aa8.15□□□□□ -1.1
SHROOM1-206ENST00000495680 SMR3BP02814 79 aaPredicted RBP8.15□□□□□ -1.1
SHROOM1-206ENST00000495680 TCRBP04435 133 aa8.15□□□□□ -1.1
SHROOM1-206ENST00000495680 S100A11P31949 105 aa8.15□□□□□ -1.1
SHROOM1-206ENST00000495680 PDE6HQ13956 83 aa8.15□□□□□ -1.1
SHROOM1-206ENST00000495680 MUC21Q5SSG8 566 aa8.15□□□□□ -1.1
SHROOM1-206ENST00000495680 CDPF1Q6NVV7 123 aa8.15□□□□□ -1.1
SHROOM1-206ENST00000495680 C12orf45Q8N5I9 185 aaPredicted RBP8.15□□□□□ -1.1
SHROOM1-206ENST00000495680 CHAC2Q8WUX2 184 aa8.15□□□□□ -1.1
SHROOM1-206ENST00000495680 ZNF479Q96JC4 524 aa8.15□□□□□ -1.1
SHROOM1-206ENST00000495680 NPCDR1Q9BY65 106 aa8.15□□□□□ -1.1
SHROOM1-206ENST00000495680 MDFICQ9P1T7 246 aa8.15□□□□□ -1.1
SHROOM1-206ENST00000495680 K7EQD1 137 aa8.14□□□□□ -1.11
SHROOM1-206ENST00000495680 EREGO14944 169 aa8.14□□□□□ -1.11
SHROOM1-206ENST00000495680 LYRM1O43325 122 aa8.14□□□□□ -1.11
SHROOM1-206ENST00000495680 NMBP08949 121 aa8.14□□□□□ -1.11
SHROOM1-206ENST00000495680 OR10J4P0C629 311 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms