RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 FAM24BQ8N5W8 94 aa9.7□□□□□ -0.86
ERCC3-209ENST00000494464 YPEL4Q96NS1 127 aa9.7□□□□□ -0.86
ERCC3-209ENST00000494464 CSTL1Q9H114 145 aa9.7□□□□□ -0.86
ERCC3-209ENST00000494464 RABAC1Q9UI14 185 aa9.7□□□□□ -0.86
ERCC3-209ENST00000494464 RYR2Q92736 4967 aa9.7□□□□□ -0.86
ERCC3-209ENST00000494464 LCE6AA0A183 80 aa9.69□□□□□ -0.86
ERCC3-209ENST00000494464 C9JCJ5 164 aa9.69□□□□□ -0.86
ERCC3-209ENST00000494464 NDUFB4O95168 129 aa9.69□□□□□ -0.86
ERCC3-209ENST00000494464 ATF4P18848 351 aaPredicted RBP9.69□□□□□ -0.86
ERCC3-209ENST00000494464 RNF125Q96EQ8 232 aa9.69□□□□□ -0.86
ERCC3-209ENST00000494464 SHANK2-AS3Q9BTD1 123 aa9.69□□□□□ -0.86
ERCC3-209ENST00000494464 SLC25A39Q9BZJ4 359 aaPredicted RBP9.69□□□□□ -0.86
ERCC3-209ENST00000494464 LY96Q9Y6Y9 160 aa9.69□□□□□ -0.86
ERCC3-209ENST00000494464 BUB3O43684 328 aa9.68□□□□□ -0.86
ERCC3-209ENST00000494464 MT-ND4LP03901 98 aa9.68□□□□□ -0.86
ERCC3-209ENST00000494464 PYYP10082 97 aa9.68□□□□□ -0.86
ERCC3-209ENST00000494464 ADIRFQ15847 76 aa9.68□□□□□ -0.86
ERCC3-209ENST00000494464 RNF24Q9Y225 148 aa9.68□□□□□ -0.86
ERCC3-209ENST00000494464 DNAH1Q9P2D7 4330 aa9.68□□□□□ -0.86
ERCC3-209ENST00000494464 A0A0J9YWU9 116 aa9.67□□□□□ -0.86
ERCC3-209ENST00000494464 S100A7P31151 101 aa9.67□□□□□ -0.86
ERCC3-209ENST00000494464 RNF212Q495C1 297 aa9.67□□□□□ -0.86
ERCC3-209ENST00000494464 LEMD1Q68G75 181 aa9.67□□□□□ -0.86
ERCC3-209ENST00000494464 SIGLEC15Q6ZMC9 328 aa9.67□□□□□ -0.86
ERCC3-209ENST00000494464 LINC01551Q86U37 167 aa9.67□□□□□ -0.86
ERCC3-209ENST00000494464 C2CD4CQ8TF44 421 aa9.67□□□□□ -0.86
ERCC3-209ENST00000494464 HIST1H2BAQ96A08 127 aa9.67□□□□□ -0.86
ERCC3-209ENST00000494464 ANAPC16Q96DE5 110 aa9.67□□□□□ -0.86
ERCC3-209ENST00000494464 DERL1Q9BUN8 251 aa9.67□□□□□ -0.86
ERCC3-209ENST00000494464 ZNF688P0C7X2 276 aa9.66□□□□□ -0.86
ERCC3-209ENST00000494464 TRPT1Q86TN4 253 aaKnown RBP9.66□□□□□ -0.86
ERCC3-209ENST00000494464 STHQ8IWL8 128 aa9.66□□□□□ -0.86
ERCC3-209ENST00000494464 ISOC2Q96AB3 205 aa9.66□□□□□ -0.86
ERCC3-209ENST00000494464 NRN1Q9NPD7 142 aa9.66□□□□□ -0.86
ERCC3-209ENST00000494464 ALMS1Q8TCU4 4167 aa9.66□□□□□ -0.86
ERCC3-209ENST00000494464 TENM2Q9NT68 2774 aa9.66□□□□□ -0.86
ERCC3-209ENST00000494464 TRBV20OR9-2A0A075B6H5 130 aa9.65□□□□□ -0.86
ERCC3-209ENST00000494464 CA1P00915 261 aaPredicted RBP9.65□□□□□ -0.86
ERCC3-209ENST00000494464 NBEAP1P0C6P0 100 aa9.65□□□□□ -0.86
ERCC3-209ENST00000494464 HIST1H1EP10412 219 aaKnown RBP9.65□□□□□ -0.86
ERCC3-209ENST00000494464 RPL35P42766 123 aaKnown RBP9.65□□□□□ -0.86
ERCC3-209ENST00000494464 SUMO1P63165 101 aaKnown RBP9.65□□□□□ -0.86
ERCC3-209ENST00000494464 BPIFA4PQ86YQ2 179 aa9.65□□□□□ -0.86
ERCC3-209ENST00000494464 PPP1R2P9O14990 202 aa9.64□□□□□ -0.87
ERCC3-209ENST00000494464 TAS2R60P59551 318 aa9.64□□□□□ -0.87
ERCC3-209ENST00000494464 ELOBQ15370 118 aa9.64□□□□□ -0.87
ERCC3-209ENST00000494464 MORN3Q6PF18 240 aaPredicted RBP9.64□□□□□ -0.87
ERCC3-209ENST00000494464 C11orf68Q9H3H3 251 aaKnown RBP9.64□□□□□ -0.87
ERCC3-209ENST00000494464 H7BYZ3 331 aa9.63□□□□□ -0.87
ERCC3-209ENST00000494464 PEX7O00628 323 aa9.63□□□□□ -0.87
ERCC3-209ENST00000494464 MRPS12O15235 138 aaKnown RBP9.63□□□□□ -0.87
ERCC3-209ENST00000494464 IGLC2P0DOY2 106 aa9.63□□□□□ -0.87
ERCC3-209ENST00000494464 RAB5AP20339 215 aa9.63□□□□□ -0.87
ERCC3-209ENST00000494464 SNRPD3P62318 126 aaKnown RBP9.63□□□□□ -0.87
ERCC3-209ENST00000494464 C1orf194Q5T5A4 169 aa9.63□□□□□ -0.87
ERCC3-209ENST00000494464 IGF2BP2-AS1Q96M15 143 aa9.63□□□□□ -0.87
ERCC3-209ENST00000494464 PLECQ15149 4684 aaKnown RBP9.63□□□□□ -0.87
ERCC3-209ENST00000494464 NUPR2A6NF83 97 aa9.63□□□□□ -0.87
ERCC3-209ENST00000494464 ZNF98A6NK75 572 aa9.63□□□□□ -0.87
ERCC3-209ENST00000494464 GNG4P50150 75 aa9.63□□□□□ -0.87
ERCC3-209ENST00000494464 CNN1P51911 297 aaKnown RBP9.63□□□□□ -0.87
ERCC3-209ENST00000494464 PDE6HQ13956 83 aa9.63□□□□□ -0.87
ERCC3-209ENST00000494464 CENPWQ5EE01 88 aa9.63□□□□□ -0.87
ERCC3-209ENST00000494464 PSMG4Q5JS54 123 aa9.63□□□□□ -0.87
ERCC3-209ENST00000494464 LYPD1Q8N2G4 141 aa9.63□□□□□ -0.87
ERCC3-209ENST00000494464 C5orf17Q8NAS9 161 aa9.63□□□□□ -0.87
ERCC3-209ENST00000494464 OR11H2Q8NH07 326 aa9.63□□□□□ -0.87
ERCC3-209ENST00000494464 OTORQ9NRC9 128 aa9.63□□□□□ -0.87
ERCC3-209ENST00000494464 TRBV19A0A075B6N1 114 aa9.62□□□□□ -0.87
ERCC3-209ENST00000494464 TRBV24-1A0A075B6N3 115 aa9.62□□□□□ -0.87
ERCC3-209ENST00000494464 KNCNA6PVL3 124 aa9.62□□□□□ -0.87
ERCC3-209ENST00000494464 S100A9P06702 114 aaKnown RBP9.62□□□□□ -0.87
ERCC3-209ENST00000494464 GIG44P09565 113 aaPredicted RBP9.62□□□□□ -0.87
ERCC3-209ENST00000494464 FLI1Q01543 452 aaPredicted RBP9.62□□□□□ -0.87
ERCC3-209ENST00000494464 ACTL10Q5JWF8 245 aa9.62□□□□□ -0.87
ERCC3-209ENST00000494464 OCC1Q8TAD7 63 aa9.62□□□□□ -0.87
ERCC3-209ENST00000494464 BLNKQ8WV28 456 aa9.62□□□□□ -0.87
ERCC3-209ENST00000494464 SMIM12Q96EX1 92 aa9.62□□□□□ -0.87
ERCC3-209ENST00000494464 SFRP2Q96HF1 295 aa9.62□□□□□ -0.87
ERCC3-209ENST00000494464 IMMP2LQ96T52 175 aa9.62□□□□□ -0.87
ERCC3-209ENST00000494464 ATG101Q9BSB4 218 aa9.62□□□□□ -0.87
ERCC3-209ENST00000494464 Q9H3A6 140 aa9.62□□□□□ -0.87
ERCC3-209ENST00000494464 ZNF586Q9NXT0 402 aa9.62□□□□□ -0.87
ERCC3-209ENST00000494464 EPDR1Q9UM22 224 aa9.62□□□□□ -0.87
ERCC3-209ENST00000494464 AGRNO00468 2067 aa9.61□□□□□ -0.87
ERCC3-209ENST00000494464 SLC25A5P05141 298 aaKnown RBP9.61□□□□□ -0.87
ERCC3-209ENST00000494464 RPL7P18124 248 aaKnown RBP9.61□□□□□ -0.87
ERCC3-209ENST00000494464 S100PP25815 95 aa9.61□□□□□ -0.87
ERCC3-209ENST00000494464 RANP62826 216 aaKnown RBP9.61□□□□□ -0.87
ERCC3-209ENST00000494464 SAMD13Q5VXD3 122 aa9.61□□□□□ -0.87
ERCC3-209ENST00000494464 PYGO2Q9BRQ0 406 aa9.61□□□□□ -0.87
ERCC3-209ENST00000494464 KLF12Q9Y4X4 402 aa9.61□□□□□ -0.87
ERCC3-209ENST00000494464 LOC105371267A0A1B0GV96 52 aa9.6□□□□□ -0.87
ERCC3-209ENST00000494464 PGPA6NDG6 321 aa9.6□□□□□ -0.87
ERCC3-209ENST00000494464 PGPEP1LA6NFU8 196 aa9.6□□□□□ -0.87
ERCC3-209ENST00000494464 K7EN84 100 aa9.6□□□□□ -0.87
ERCC3-209ENST00000494464 SOCS3O14543 225 aa9.6□□□□□ -0.87
ERCC3-209ENST00000494464 ZNF253O75346 499 aa9.6□□□□□ -0.87
ERCC3-209ENST00000494464 PFN1P07737 140 aaKnown RBP9.6□□□□□ -0.87
ERCC3-209ENST00000494464 CXCL1P09341 107 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms