RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 UMAD1C9J7I0 102 aa9.76□□□□□ -0.85
COL1A1-208ENST00000494334 TSPOP30536 169 aa9.76□□□□□ -0.85
COL1A1-208ENST00000494334 FGF8P55075 233 aaPredicted RBP9.76□□□□□ -0.85
COL1A1-208ENST00000494334 ZFP69Q49AA0 526 aa9.76□□□□□ -0.85
COL1A1-208ENST00000494334 ZFAND6Q6FIF0 208 aa9.76□□□□□ -0.85
COL1A1-208ENST00000494334 IQCF2Q8IXL9 164 aa9.76□□□□□ -0.85
COL1A1-208ENST00000494334 C9orf62Q8N4C0 152 aa9.76□□□□□ -0.85
COL1A1-208ENST00000494334 TMED6Q8WW62 240 aa9.76□□□□□ -0.85
COL1A1-208ENST00000494334 TMEM208Q9BTX3 173 aa9.76□□□□□ -0.85
COL1A1-208ENST00000494334 ZNF492Q9P255 531 aa9.76□□□□□ -0.85
COL1A1-208ENST00000494334 RBAKDNA6NC62 111 aa9.75□□□□□ -0.85
COL1A1-208ENST00000494334 MAP1LC3B2A6NCE7 125 aa9.75□□□□□ -0.85
COL1A1-208ENST00000494334 J3KRW8 73 aa9.75□□□□□ -0.85
COL1A1-208ENST00000494334 PRM2P04554 102 aa9.75□□□□□ -0.85
COL1A1-208ENST00000494334 SLC25A5P05141 298 aaKnown RBP9.75□□□□□ -0.85
COL1A1-208ENST00000494334 LEPP41159 167 aa9.75□□□□□ -0.85
COL1A1-208ENST00000494334 CASC10Q5T4H9 136 aa9.75□□□□□ -0.85
COL1A1-208ENST00000494334 TMEM78Q5T7P6 136 aa9.75□□□□□ -0.85
COL1A1-208ENST00000494334 GFI1BQ5VTD9 330 aa9.75□□□□□ -0.85
COL1A1-208ENST00000494334 ARL6IP6Q8N6S5 226 aa9.75□□□□□ -0.85
COL1A1-208ENST00000494334 CMTM2Q8TAZ6 248 aa9.75□□□□□ -0.85
COL1A1-208ENST00000494334 MAP1LC3BQ9GZQ8 125 aa9.75□□□□□ -0.85
COL1A1-208ENST00000494334 A0A1W2PRE2 83 aa9.74□□□□□ -0.85
COL1A1-208ENST00000494334 HBE1P02100 147 aa9.74□□□□□ -0.85
COL1A1-208ENST00000494334 SUMO1P63165 101 aaKnown RBP9.74□□□□□ -0.85
COL1A1-208ENST00000494334 GNG5P63218 68 aa9.74□□□□□ -0.85
COL1A1-208ENST00000494334 RRN3P1Q2M238 152 aa9.74□□□□□ -0.85
COL1A1-208ENST00000494334 SLC51BQ86UW2 128 aa9.74□□□□□ -0.85
COL1A1-208ENST00000494334 C11orf45Q8TAV5 145 aa9.74□□□□□ -0.85
COL1A1-208ENST00000494334 FAM213BQ8TBF2 198 aa9.74□□□□□ -0.85
COL1A1-208ENST00000494334 MBD3L1Q8WWY6 194 aa9.74□□□□□ -0.85
COL1A1-208ENST00000494334 LINC01587Q99440 93 aa9.74□□□□□ -0.85
COL1A1-208ENST00000494334 RPH3ALQ9UNE2 315 aa9.74□□□□□ -0.85
COL1A1-208ENST00000494334 STARD9Q9P2P6 4700 aa9.74□□□□□ -0.85
COL1A1-208ENST00000494334 ZNF705GA8MUZ8 300 aaPredicted RBP9.73□□□□□ -0.85
COL1A1-208ENST00000494334 KLLNB2CW77 178 aa9.73□□□□□ -0.85
COL1A1-208ENST00000494334 CRISP2P16562 243 aa9.73□□□□□ -0.85
COL1A1-208ENST00000494334 ZNF138P52744 262 aa9.73□□□□□ -0.85
COL1A1-208ENST00000494334 NANOS2P60321 138 aaKnown RBP9.73□□□□□ -0.85
COL1A1-208ENST00000494334 DPPA3Q6W0C5 159 aa9.73□□□□□ -0.85
COL1A1-208ENST00000494334 TMEM256Q8N2U0 113 aa9.73□□□□□ -0.85
COL1A1-208ENST00000494334 Q8TAT8 98 aa9.73□□□□□ -0.85
COL1A1-208ENST00000494334 C20orf144Q9BQM9 153 aa9.73□□□□□ -0.85
COL1A1-208ENST00000494334 TRAV12-3A0A0B4J271 114 aa9.72□□□□□ -0.85
COL1A1-208ENST00000494334 LOC102723971A0A1B0GUV8 181 aa9.72□□□□□ -0.85
COL1A1-208ENST00000494334 TMEM189A5PLL7 270 aa9.72□□□□□ -0.85
COL1A1-208ENST00000494334 GGTLC3B5MD39 225 aa9.72□□□□□ -0.85
COL1A1-208ENST00000494334 H7BYZ3 331 aa9.72□□□□□ -0.85
COL1A1-208ENST00000494334 NMBP08949 121 aa9.72□□□□□ -0.85
COL1A1-208ENST00000494334 AZU1P20160 251 aa9.72□□□□□ -0.85
COL1A1-208ENST00000494334 EMP1P54849 157 aa9.72□□□□□ -0.85
COL1A1-208ENST00000494334 TAS2R60P59551 318 aa9.72□□□□□ -0.85
COL1A1-208ENST00000494334 PMS2P11Q13670 270 aa9.72□□□□□ -0.85
COL1A1-208ENST00000494334 EIF5AL1Q6IS14 154 aaKnown RBP9.72□□□□□ -0.85
COL1A1-208ENST00000494334 GOLT1AQ6ZVE7 132 aa9.72□□□□□ -0.85
COL1A1-208ENST00000494334 ZFAND2AQ8N6M9 145 aa9.72□□□□□ -0.85
COL1A1-208ENST00000494334 C5orf17Q8NAS9 161 aa9.72□□□□□ -0.85
COL1A1-208ENST00000494334 SFT2D1Q8WV19 159 aa9.72□□□□□ -0.85
COL1A1-208ENST00000494334 EPDR1Q9UM22 224 aa9.72□□□□□ -0.85
COL1A1-208ENST00000494334 CELA1Q9UNI1 258 aa9.72□□□□□ -0.85
COL1A1-208ENST00000494334 YTHDF2Q9Y5A9 579 aaKnown RBP9.72□□□□□ -0.85
COL1A1-208ENST00000494334 TRBV7-9A0A0J9YWB2 115 aa9.71□□□□□ -0.86
COL1A1-208ENST00000494334 C7orf71A4D174 169 aa9.71□□□□□ -0.86
COL1A1-208ENST00000494334 CXorf65A6NEN9 183 aa9.71□□□□□ -0.86
COL1A1-208ENST00000494334 FAM74A7A6NL05 159 aa9.71□□□□□ -0.86
COL1A1-208ENST00000494334 ZNF324O75467 553 aaPredicted RBP9.71□□□□□ -0.86
COL1A1-208ENST00000494334 TCRAP04437 139 aa9.71□□□□□ -0.86
COL1A1-208ENST00000494334 GPX1P07203 203 aa9.71□□□□□ -0.86
COL1A1-208ENST00000494334 HTN1P15515 57 aa9.71□□□□□ -0.86
COL1A1-208ENST00000494334 NKX2-5P52952 324 aaPredicted RBP9.71□□□□□ -0.86
COL1A1-208ENST00000494334 UBE2G2P60604 165 aa9.71□□□□□ -0.86
COL1A1-208ENST00000494334 BTN1A1Q13410 526 aa9.71□□□□□ -0.86
COL1A1-208ENST00000494334 PRR9Q5T870 116 aa9.71□□□□□ -0.86
COL1A1-208ENST00000494334 TRAV8-1A0A0A6YYK1 113 aa9.7□□□□□ -0.86
COL1A1-208ENST00000494334 SERTM2A0A1B0GWG4 89 aa9.7□□□□□ -0.86
COL1A1-208ENST00000494334 H2AFB1P0C5Y9 115 aa9.7□□□□□ -0.86
COL1A1-208ENST00000494334 RNASE4P34096 147 aaKnown RBP9.7□□□□□ -0.86
COL1A1-208ENST00000494334 SULT1A2P50226 295 aa9.7□□□□□ -0.86
COL1A1-208ENST00000494334 RAB5CP51148 216 aa9.7□□□□□ -0.86
COL1A1-208ENST00000494334 SGK494Q96LW2 274 aa9.7□□□□□ -0.86
COL1A1-208ENST00000494334 NIPSNAP3BQ9BS92 247 aa9.7□□□□□ -0.86
COL1A1-208ENST00000494334 LENEPQ9Y5L5 61 aa9.7□□□□□ -0.86
COL1A1-208ENST00000494334 A0A1B0GV50 99 aa9.69□□□□□ -0.86
COL1A1-208ENST00000494334 PLAC8L1A1L4L8 177 aa9.69□□□□□ -0.86
COL1A1-208ENST00000494334 SPART-AS1P0CW21 52 aa9.69□□□□□ -0.86
COL1A1-208ENST00000494334 C12orf74Q32Q52 190 aa9.69□□□□□ -0.86
COL1A1-208ENST00000494334 Q6ZQT7 251 aa9.69□□□□□ -0.86
COL1A1-208ENST00000494334 TVP23CQ96ET8 276 aa9.69□□□□□ -0.86
COL1A1-208ENST00000494334 NKX6-2Q9C056 277 aaPredicted RBP9.69□□□□□ -0.86
COL1A1-208ENST00000494334 DKK2Q9UBU2 259 aa9.69□□□□□ -0.86
COL1A1-208ENST00000494334 CSMD3Q7Z407 3707 aa9.68□□□□□ -0.86
COL1A1-208ENST00000494334 FAM222AQ5U5X8 452 aa9.68□□□□□ -0.86
COL1A1-208ENST00000494334 CEMP1Q6PRD7 247 aaPredicted RBP9.68□□□□□ -0.86
COL1A1-208ENST00000494334 ZNF767PQ75MW2 155 aa9.68□□□□□ -0.86
COL1A1-208ENST00000494334 CCDC28AQ8IWP9 274 aa9.68□□□□□ -0.86
COL1A1-208ENST00000494334 CYB561D1Q8N8Q1 229 aa9.68□□□□□ -0.86
COL1A1-208ENST00000494334 PHLDA1Q8WV24 401 aaPredicted RBP9.68□□□□□ -0.86
COL1A1-208ENST00000494334 PYGO2Q9BRQ0 406 aa9.68□□□□□ -0.86
COL1A1-208ENST00000494334 ATG101Q9BSB4 218 aa9.68□□□□□ -0.86
COL1A1-208ENST00000494334 PSG8Q9UQ74 426 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms