RNA–Protein interactions for RNA: ENST00000494323.5

PTCD3-219, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 540 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-219ENST00000494323 LINC01620Q4KN68 170 aa3.55□□□□□ -1.84
PTCD3-219ENST00000494323 NMSQ5H8A3 153 aa3.55□□□□□ -1.84
PTCD3-219ENST00000494323 SPATA31B1PQ5VZV4 182 aa3.55□□□□□ -1.84
PTCD3-219ENST00000494323 AMTNQ6UX39 209 aa3.55□□□□□ -1.84
PTCD3-219ENST00000494323 SSX7Q7RTT5 188 aa3.55□□□□□ -1.84
PTCD3-219ENST00000494323 BAP18Q8IXM2 172 aa3.55□□□□□ -1.84
PTCD3-219ENST00000494323 LGI3Q8N145 548 aa3.55□□□□□ -1.84
PTCD3-219ENST00000494323 RNF182Q8N6D2 247 aa3.55□□□□□ -1.84
PTCD3-219ENST00000494323 Q8NBF4 154 aa3.55□□□□□ -1.84
PTCD3-219ENST00000494323 OR11H7Q8NGC8 314 aa3.55□□□□□ -1.84
PTCD3-219ENST00000494323 OR1B1Q8NGR6 318 aa3.55□□□□□ -1.84
PTCD3-219ENST00000494323 RAB2BQ8WUD1 216 aa3.55□□□□□ -1.84
PTCD3-219ENST00000494323 RBPMSQ93062 196 aaKnown RBP3.55□□□□□ -1.84
PTCD3-219ENST00000494323 IGF2BP2-AS1Q96M15 143 aa3.55□□□□□ -1.84
PTCD3-219ENST00000494323 LINC01587Q99440 93 aa3.55□□□□□ -1.84
PTCD3-219ENST00000494323 SLC25A39Q9BZJ4 359 aaPredicted RBP3.55□□□□□ -1.84
PTCD3-219ENST00000494323 OCR1Q9BZK8 76 aa3.55□□□□□ -1.84
PTCD3-219ENST00000494323 RBKSQ9H477 322 aa3.55□□□□□ -1.84
PTCD3-219ENST00000494323 NAA60Q9H7X0 242 aa3.55□□□□□ -1.84
PTCD3-219ENST00000494323 RPRMQ9NS64 109 aa3.55□□□□□ -1.84
PTCD3-219ENST00000494323 DOK5Q9P104 306 aa3.55□□□□□ -1.84
PTCD3-219ENST00000494323 MTFP1Q9UDX5 166 aa3.55□□□□□ -1.84
PTCD3-219ENST00000494323 RSL24D1Q9UHA3 163 aaKnown RBP3.55□□□□□ -1.84
PTCD3-219ENST00000494323 PAIP2BQ9ULR5 123 aaKnown RBP3.55□□□□□ -1.84
PTCD3-219ENST00000494323 C14orf166Q9Y224 244 aaKnown RBP3.55□□□□□ -1.84
PTCD3-219ENST00000494323 U3KQ87 197 aa3.55□□□□□ -1.84
PTCD3-219ENST00000494323 IGLV4-3A0A075B6K6 122 aa3.54□□□□□ -1.84
PTCD3-219ENST00000494323 IGKV1OR2-108A0A075B7D4 117 aa3.54□□□□□ -1.84
PTCD3-219ENST00000494323 A0A0J9YY99 117 aa3.54□□□□□ -1.84
PTCD3-219ENST00000494323 PLAC8L1A1L4L8 177 aa3.54□□□□□ -1.84
PTCD3-219ENST00000494323 LYRM9A8MSI8 78 aa3.54□□□□□ -1.84
PTCD3-219ENST00000494323 GABARAPH6UMI1 98 aa3.54□□□□□ -1.84
PTCD3-219ENST00000494323 GABARAPO95166 117 aa3.54□□□□□ -1.84
PTCD3-219ENST00000494323 ATP5G1P05496 136 aa3.54□□□□□ -1.84
PTCD3-219ENST00000494323 SULT1A3P0DMM9 295 aa3.54□□□□□ -1.84
PTCD3-219ENST00000494323 SULT1A4P0DMN0 295 aa3.54□□□□□ -1.84
PTCD3-219ENST00000494323 INAFM2P0DMQ5 153 aa3.54□□□□□ -1.84
PTCD3-219ENST00000494323 ORM2P19652 201 aa3.54□□□□□ -1.84
PTCD3-219ENST00000494323 GPX4P36969 197 aaPredicted RBP3.54□□□□□ -1.84
PTCD3-219ENST00000494323 ATP5G3P48201 142 aa3.54□□□□□ -1.84
PTCD3-219ENST00000494323 TMBIM6P55061 237 aa3.54□□□□□ -1.84
PTCD3-219ENST00000494323 NDUFV3P56181 108 aaKnown RBP3.54□□□□□ -1.84
PTCD3-219ENST00000494323 TAS2R19P59542 299 aa3.54□□□□□ -1.84
PTCD3-219ENST00000494323 ESRGQ1W209 222 aa3.54□□□□□ -1.84
PTCD3-219ENST00000494323 C1orf194Q5T5A4 169 aa3.54□□□□□ -1.84
PTCD3-219ENST00000494323 LINC00242Q5T6M2 205 aa3.54□□□□□ -1.84
PTCD3-219ENST00000494323 OR8G2PQ6IF36 304 aa3.54□□□□□ -1.84
PTCD3-219ENST00000494323 LYZL2Q7Z4W2 148 aa3.54□□□□□ -1.84
PTCD3-219ENST00000494323 TMEM229BQ8NBD8 167 aa3.54□□□□□ -1.84
PTCD3-219ENST00000494323 DTD1Q8TEA8 209 aa3.54□□□□□ -1.84
PTCD3-219ENST00000494323 SLC35E1Q96K37 410 aa3.54□□□□□ -1.84
PTCD3-219ENST00000494323 TPPP3Q9BW30 176 aa3.54□□□□□ -1.84
PTCD3-219ENST00000494323 GFRA4Q9GZZ7 299 aa3.54□□□□□ -1.84
PTCD3-219ENST00000494323 NOP10Q9NPE3 64 aaKnown RBP3.54□□□□□ -1.84
PTCD3-219ENST00000494323 EXTL2Q9UBQ6 330 aa3.54□□□□□ -1.84
PTCD3-219ENST00000494323 KCNIP3Q9Y2W7 256 aa3.54□□□□□ -1.84
PTCD3-219ENST00000494323 TMEM56-RWDD3S4R434 201 aa3.54□□□□□ -1.84
PTCD3-219ENST00000494323 TRAV26-1A0A087WT03 109 aa3.53□□□□□ -1.84
PTCD3-219ENST00000494323 TRAV8-2A0A0B4J237 113 aa3.53□□□□□ -1.84
PTCD3-219ENST00000494323 CRYM-AS1A6NIL9 109 aa3.53□□□□□ -1.84
PTCD3-219ENST00000494323 ZNF98A6NK75 572 aa3.53□□□□□ -1.84
PTCD3-219ENST00000494323 DISC1C4P0D8 188 aa3.53□□□□□ -1.84
PTCD3-219ENST00000494323 H3BTX0 84 aa3.53□□□□□ -1.84
PTCD3-219ENST00000494323 DUSP14O95147 198 aaKnown RBP3.53□□□□□ -1.84
PTCD3-219ENST00000494323 INSP01308 110 aa3.53□□□□□ -1.84
PTCD3-219ENST00000494323 FABP1P07148 127 aa3.53□□□□□ -1.84
PTCD3-219ENST00000494323 AKR1C4P17516 323 aa3.53□□□□□ -1.84
PTCD3-219ENST00000494323 TBPP20226 339 aa3.53□□□□□ -1.84
PTCD3-219ENST00000494323 NUP62P37198 522 aaPredicted RBP3.53□□□□□ -1.84
PTCD3-219ENST00000494323 GALR1P47211 349 aa3.53□□□□□ -1.84
PTCD3-219ENST00000494323 RHOBP62745 196 aa3.53□□□□□ -1.84
PTCD3-219ENST00000494323 HIST1H1AQ02539 215 aaPredicted RBP3.53□□□□□ -1.84
PTCD3-219ENST00000494323 SMCO1Q147U7 214 aa3.53□□□□□ -1.84
PTCD3-219ENST00000494323 GPR107Q5VW38 600 aa3.53□□□□□ -1.84
PTCD3-219ENST00000494323 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.53□□□□□ -1.84
PTCD3-219ENST00000494323 LINC00299Q6ZSB3 139 aa3.53□□□□□ -1.84
PTCD3-219ENST00000494323 OR51S1Q8NGJ8 323 aa3.53□□□□□ -1.84
PTCD3-219ENST00000494323 OR4C16Q8NGL9 310 aa3.53□□□□□ -1.84
PTCD3-219ENST00000494323 OR1S1Q8NH92 325 aa3.53□□□□□ -1.84
PTCD3-219ENST00000494323 GNPNAT1Q96EK6 184 aaPredicted RBP3.53□□□□□ -1.84
PTCD3-219ENST00000494323 TRGV9Q99603 122 aa3.53□□□□□ -1.84
PTCD3-219ENST00000494323 NAA50Q9GZZ1 169 aaKnown RBP3.53□□□□□ -1.84
PTCD3-219ENST00000494323 ZNF586Q9NXT0 402 aa3.53□□□□□ -1.84
PTCD3-219ENST00000494323 APOBP04114 4563 aaKnown RBP3.52□□□□□ -1.85
PTCD3-219ENST00000494323 LRP1BQ9NZR2 4599 aa3.52□□□□□ -1.85
PTCD3-219ENST00000494323 HERC1Q15751 4861 aa3.52□□□□□ -1.85
PTCD3-219ENST00000494323 A0A0B4J2A0 478 aa3.52□□□□□ -1.85
PTCD3-219ENST00000494323 A8MTW9 85 aa3.52□□□□□ -1.85
PTCD3-219ENST00000494323 RGS5O15539 181 aa3.52□□□□□ -1.85
PTCD3-219ENST00000494323 SMR3BP02814 79 aaPredicted RBP3.52□□□□□ -1.85
PTCD3-219ENST00000494323 SNRPCP09234 159 aaKnown RBP3.52□□□□□ -1.85
PTCD3-219ENST00000494323 IAPPP10997 89 aa3.52□□□□□ -1.85
PTCD3-219ENST00000494323 TSPOP30536 169 aa3.52□□□□□ -1.85
PTCD3-219ENST00000494323 MEOX2P50222 304 aa3.52□□□□□ -1.85
PTCD3-219ENST00000494323 CCR6P51684 374 aa3.52□□□□□ -1.85
PTCD3-219ENST00000494323 B2MP61769 119 aa3.52□□□□□ -1.85
PTCD3-219ENST00000494323 RAB11AP62491 216 aa3.52□□□□□ -1.85
PTCD3-219ENST00000494323 SURF2Q15527 256 aaPredicted RBP3.52□□□□□ -1.85
PTCD3-219ENST00000494323 CNPY1Q3B7I2 92 aa3.52□□□□□ -1.85
PTCD3-219ENST00000494323 KRTAP5-1Q6L8H4 278 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms