RNA–Protein interactions for RNA: ENST00000494083.1

CDC42EP3-205, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 3,726 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-205ENST00000494083 TMEM251Q8N6I4 163 aa1.89□□□□□ -2.11
CDC42EP3-205ENST00000494083 Q8N6K4 173 aa1.89□□□□□ -2.11
CDC42EP3-205ENST00000494083 LINC00167Q96N53 147 aa1.89□□□□□ -2.11
CDC42EP3-205ENST00000494083 TRGV9Q99603 122 aa1.89□□□□□ -2.11
CDC42EP3-205ENST00000494083 IGKV2D-26A0A0A0MRZ7 120 aa1.89□□□□□ -2.11
CDC42EP3-205ENST00000494083 GRIFINA4D1Z8 144 aa1.89□□□□□ -2.11
CDC42EP3-205ENST00000494083 RBAKDNA6NC62 111 aa1.89□□□□□ -2.11
CDC42EP3-205ENST00000494083 ZNF705FA8MVS1 300 aaPredicted RBP1.89□□□□□ -2.11
CDC42EP3-205ENST00000494083 LMO7DNF2Z398 122 aa1.89□□□□□ -2.11
CDC42EP3-205ENST00000494083 IGF1P05019 195 aa1.89□□□□□ -2.11
CDC42EP3-205ENST00000494083 ZNF705DP0CH99 300 aaPredicted RBP1.89□□□□□ -2.11
CDC42EP3-205ENST00000494083 ZNF705BP0CI00 300 aaPredicted RBP1.89□□□□□ -2.11
CDC42EP3-205ENST00000494083 GATA1P15976 413 aaPredicted RBP1.89□□□□□ -2.11
CDC42EP3-205ENST00000494083 HLA-DMBP28068 263 aa1.89□□□□□ -2.11
CDC42EP3-205ENST00000494083 ID1P41134 155 aa1.89□□□□□ -2.11
CDC42EP3-205ENST00000494083 C12orf54Q6X4T0 127 aa1.89□□□□□ -2.11
CDC42EP3-205ENST00000494083 ACP7Q6ZNF0 438 aa1.89□□□□□ -2.11
CDC42EP3-205ENST00000494083 SSX8Q7RTT4 187 aa1.89□□□□□ -2.11
CDC42EP3-205ENST00000494083 NDUFA11Q86Y39 141 aa1.89□□□□□ -2.11
CDC42EP3-205ENST00000494083 OR10AG1Q8NH19 301 aa1.89□□□□□ -2.11
CDC42EP3-205ENST00000494083 ODF3Q96PU9 254 aa1.89□□□□□ -2.11
CDC42EP3-205ENST00000494083 TMEM70Q9BUB7 260 aa1.89□□□□□ -2.11
CDC42EP3-205ENST00000494083 NAT8BQ9UHF3 227 aa1.89□□□□□ -2.11
CDC42EP3-205ENST00000494083 PILRBQ9UKJ0 227 aa1.89□□□□□ -2.11
CDC42EP3-205ENST00000494083 TCF19Q9Y242 345 aa1.89□□□□□ -2.11
CDC42EP3-205ENST00000494083 A0A0G2JMM0 328 aa1.89□□□□□ -2.11
CDC42EP3-205ENST00000494083 A0A1B0GX51 115 aa1.89□□□□□ -2.11
CDC42EP3-205ENST00000494083 A0A1W2PPB8 328 aa1.89□□□□□ -2.11
CDC42EP3-205ENST00000494083 TCRBV4S1A1TA0A5B7 111 aa1.89□□□□□ -2.11
CDC42EP3-205ENST00000494083 EPOPA6NHQ4 379 aa1.89□□□□□ -2.11
CDC42EP3-205ENST00000494083 KIR3DP1A8MWS1 328 aa1.89□□□□□ -2.11
CDC42EP3-205ENST00000494083 SOCS3O14543 225 aa1.89□□□□□ -2.11
CDC42EP3-205ENST00000494083 CCL16O15467 120 aa1.89□□□□□ -2.11
CDC42EP3-205ENST00000494083 OR2H2O95918 312 aa1.89□□□□□ -2.11
CDC42EP3-205ENST00000494083 IGHV3-13P01766 116 aa1.89□□□□□ -2.11
CDC42EP3-205ENST00000494083 CD59P13987 128 aa1.89□□□□□ -2.11
CDC42EP3-205ENST00000494083 RPS28P62857 69 aaKnown RBP1.89□□□□□ -2.11
CDC42EP3-205ENST00000494083 ARFRP1Q13795 201 aa1.89□□□□□ -2.11
CDC42EP3-205ENST00000494083 TMEM78Q5T7P6 136 aa1.89□□□□□ -2.11
CDC42EP3-205ENST00000494083 Q6AWC8 147 aa1.89□□□□□ -2.11
CDC42EP3-205ENST00000494083 MTURNQ8N3F0 131 aa1.89□□□□□ -2.11
CDC42EP3-205ENST00000494083 VSTM2AQ8TAG5 236 aa1.89□□□□□ -2.11
CDC42EP3-205ENST00000494083 ZDHHC19Q8WVZ1 309 aaPredicted RBP1.89□□□□□ -2.11
CDC42EP3-205ENST00000494083 SPACA5Q96QH8 159 aa1.89□□□□□ -2.11
CDC42EP3-205ENST00000494083 DCTN5Q9BTE1 182 aa1.89□□□□□ -2.11
CDC42EP3-205ENST00000494083 PSG8Q9UQ74 426 aa1.89□□□□□ -2.11
CDC42EP3-205ENST00000494083 POLR1DQ9Y2S0 133 aa1.89□□□□□ -2.11
CDC42EP3-205ENST00000494083 RYR2Q92736 4967 aa1.88□□□□□ -2.11
CDC42EP3-205ENST00000494083 IGKV1D-17A0A075B6S4 117 aa1.88□□□□□ -2.11
CDC42EP3-205ENST00000494083 PINLYPA6NC86 204 aa1.88□□□□□ -2.11
CDC42EP3-205ENST00000494083 H3BRN7 92 aa1.88□□□□□ -2.11
CDC42EP3-205ENST00000494083 I3L2K1 104 aa1.88□□□□□ -2.11
CDC42EP3-205ENST00000494083 ZNF207O43670 478 aaKnown RBP1.88□□□□□ -2.11
CDC42EP3-205ENST00000494083 SYNGR1O43759 233 aa1.88□□□□□ -2.11
CDC42EP3-205ENST00000494083 GAGE7O76087 117 aa1.88□□□□□ -2.11
CDC42EP3-205ENST00000494083 CST7O76096 145 aa1.88□□□□□ -2.11
CDC42EP3-205ENST00000494083 TSHBP01222 138 aa1.88□□□□□ -2.11
CDC42EP3-205ENST00000494083 ORM1P02763 201 aa1.88□□□□□ -2.11
CDC42EP3-205ENST00000494083 GAGE12FP0CL80 117 aa1.88□□□□□ -2.11
CDC42EP3-205ENST00000494083 GAGE12GP0CL81 117 aa1.88□□□□□ -2.11
CDC42EP3-205ENST00000494083 GAGE12IP0CL82 117 aa1.88□□□□□ -2.11
CDC42EP3-205ENST00000494083 S100A7P31151 101 aa1.88□□□□□ -2.11
CDC42EP3-205ENST00000494083 GAGE4Q13068 117 aa1.88□□□□□ -2.11
CDC42EP3-205ENST00000494083 OOSP2Q86WS3 158 aa1.88□□□□□ -2.11
CDC42EP3-205ENST00000494083 OR11H6Q8NGC7 330 aa1.88□□□□□ -2.11
CDC42EP3-205ENST00000494083 MRAP2Q96G30 205 aa1.88□□□□□ -2.11
CDC42EP3-205ENST00000494083 VPS25Q9BRG1 176 aa1.88□□□□□ -2.11
CDC42EP3-205ENST00000494083 TMEM167BQ9NRX6 74 aa1.88□□□□□ -2.11
CDC42EP3-205ENST00000494083 SPANXA1Q9NS26 97 aa1.88□□□□□ -2.11
CDC42EP3-205ENST00000494083 MRPL36Q9P0J6 103 aaKnown RBP1.88□□□□□ -2.11
CDC42EP3-205ENST00000494083 R4GN57 208 aa1.88□□□□□ -2.11
CDC42EP3-205ENST00000494083 HSPG2P98160 4391 aa1.88□□□□□ -2.11
CDC42EP3-205ENST00000494083 RNF212BA8MTL3 300 aa1.88□□□□□ -2.11
CDC42EP3-205ENST00000494083 SRRM5B3KS81 715 aa1.88□□□□□ -2.11
CDC42EP3-205ENST00000494083 IGLL5B9A064 214 aa1.88□□□□□ -2.11
CDC42EP3-205ENST00000494083 NPIPA5E9PKD4 350 aa1.88□□□□□ -2.11
CDC42EP3-205ENST00000494083 UPK2O00526 184 aa1.88□□□□□ -2.11
CDC42EP3-205ENST00000494083 ZNF883P0CG24 379 aa1.88□□□□□ -2.11
CDC42EP3-205ENST00000494083 NMUP48645 174 aa1.88□□□□□ -2.11
CDC42EP3-205ENST00000494083 LOXL1Q08397 574 aaPredicted RBP1.88□□□□□ -2.11
CDC42EP3-205ENST00000494083 PLCXD2Q0VAA5 305 aa1.88□□□□□ -2.11
CDC42EP3-205ENST00000494083 CLEC12BQ2HXU8 276 aa1.88□□□□□ -2.11
CDC42EP3-205ENST00000494083 FAM162BQ5T6X4 162 aa1.88□□□□□ -2.11
CDC42EP3-205ENST00000494083 KRTAP7-1Q8IUC3 87 aa1.88□□□□□ -2.11
CDC42EP3-205ENST00000494083 MKXQ8IYA7 352 aa1.88□□□□□ -2.11
CDC42EP3-205ENST00000494083 CEND1Q8N111 149 aa1.88□□□□□ -2.11
CDC42EP3-205ENST00000494083 TPRX1Q8N7U7 411 aa1.88□□□□□ -2.11
CDC42EP3-205ENST00000494083 TMEM167AQ8TBQ9 72 aa1.88□□□□□ -2.11
CDC42EP3-205ENST00000494083 ITLN2Q8WWU7 325 aaPredicted RBP1.88□□□□□ -2.11
CDC42EP3-205ENST00000494083 PATE1Q8WXA2 126 aa1.88□□□□□ -2.11
CDC42EP3-205ENST00000494083 TIMD4Q96H15 378 aa1.88□□□□□ -2.11
CDC42EP3-205ENST00000494083 VGLL1Q99990 258 aa1.88□□□□□ -2.11
CDC42EP3-205ENST00000494083 RPP25Q9BUL9 199 aaKnown RBP1.88□□□□□ -2.11
CDC42EP3-205ENST00000494083 CTNNBIP1Q9NSA3 81 aaPredicted RBP1.88□□□□□ -2.11
CDC42EP3-205ENST00000494083 WASHC3Q9Y3C0 194 aa1.88□□□□□ -2.11
CDC42EP3-205ENST00000494083 MGAQ8IWI9 3026 aa1.88□□□□□ -2.11
CDC42EP3-205ENST00000494083 TENM4Q6N022 2769 aa1.88□□□□□ -2.11
CDC42EP3-205ENST00000494083 PDE4DIPQ5VU43 2346 aa1.88□□□□□ -2.11
CDC42EP3-205ENST00000494083 TNXBP22105 4242 aa1.88□□□□□ -2.11
CDC42EP3-205ENST00000494083 UBE2L5PA0A1B0GUS4 154 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms