RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 RAB2AP61019 212 aa16.06■□□□□ 0.16
SNIP1-203ENST00000493916 INO80EQ8NBZ0 244 aaPredicted RBP16.06■□□□□ 0.16
SNIP1-203ENST00000493916 OR2T35Q8NGX2 323 aa16.06■□□□□ 0.16
SNIP1-203ENST00000493916 A0A1W2PPV4 95 aa16.05■□□□□ 0.16
SNIP1-203ENST00000493916 RNF222A6NCQ9 220 aa16.05■□□□□ 0.16
SNIP1-203ENST00000493916 J3KRW8 73 aa16.05■□□□□ 0.16
SNIP1-203ENST00000493916 CRISP2P16562 243 aa16.05■□□□□ 0.16
SNIP1-203ENST00000493916 TMEM78Q5T7P6 136 aa16.05■□□□□ 0.16
SNIP1-203ENST00000493916 PQLC2Q6ZP29 291 aa16.05■□□□□ 0.16
SNIP1-203ENST00000493916 HSD17B11Q8NBQ5 300 aa16.05■□□□□ 0.16
SNIP1-203ENST00000493916 Q9H3A6 140 aa16.05■□□□□ 0.16
SNIP1-203ENST00000493916 TNFSF18Q9UNG2 199 aa16.05■□□□□ 0.16
SNIP1-203ENST00000493916 FXYD6-FXYD2A0A087WZ82 144 aa16.04■□□□□ 0.16
SNIP1-203ENST00000493916 TRAV12-3A0A0B4J271 114 aa16.04■□□□□ 0.16
SNIP1-203ENST00000493916 NMBP08949 121 aa16.04■□□□□ 0.16
SNIP1-203ENST00000493916 RANP62826 216 aaKnown RBP16.04■□□□□ 0.16
SNIP1-203ENST00000493916 OR10G4Q8NGN3 311 aa16.04■□□□□ 0.16
SNIP1-203ENST00000493916 OR10G9Q8NGN4 311 aa16.04■□□□□ 0.16
SNIP1-203ENST00000493916 OR10G7Q8NGN6 311 aa16.04■□□□□ 0.16
SNIP1-203ENST00000493916 VGLL1Q99990 258 aa16.04■□□□□ 0.16
SNIP1-203ENST00000493916 TIMM8BQ9Y5J9 83 aaPredicted RBP16.04■□□□□ 0.16
SNIP1-203ENST00000493916 C7orf71A4D174 169 aa16.03■□□□□ 0.16
SNIP1-203ENST00000493916 RBAKDNA6NC62 111 aa16.03■□□□□ 0.16
SNIP1-203ENST00000493916 G3V3Q6 166 aa16.03■□□□□ 0.16
SNIP1-203ENST00000493916 ATP6V0CP27449 155 aa16.03■□□□□ 0.16
SNIP1-203ENST00000493916 CSN1S1P47710 185 aa16.03■□□□□ 0.16
SNIP1-203ENST00000493916 CCDC28AQ8IWP9 274 aa16.03■□□□□ 0.16
SNIP1-203ENST00000493916 PYGO2Q9BRQ0 406 aa16.03■□□□□ 0.16
SNIP1-203ENST00000493916 TRBV7-9A0A0J9YWB2 115 aa16.02■□□□□ 0.16
SNIP1-203ENST00000493916 EIF3GO75821 320 aaKnown RBP eCLIP16.02■□□□□ 0.16
SNIP1-203ENST00000493916 HTN3P15516 51 aa16.02■□□□□ 0.16
SNIP1-203ENST00000493916 SERF2P84101 59 aa16.02■□□□□ 0.16
SNIP1-203ENST00000493916 ZNF492Q9P255 531 aa16.02■□□□□ 0.16
SNIP1-203ENST00000493916 EPPK1P58107 5090 aaKnown RBP16.02■□□□□ 0.15
SNIP1-203ENST00000493916 MBP02144 154 aa16.01■□□□□ 0.15
SNIP1-203ENST00000493916 DEFB130BP0DP73 79 aa16.01■□□□□ 0.15
SNIP1-203ENST00000493916 DEFB130AP0DP74 79 aa16.01■□□□□ 0.15
SNIP1-203ENST00000493916 ZFAND2AQ8N6M9 145 aa16.01■□□□□ 0.15
SNIP1-203ENST00000493916 LINC00467Q9BRT7 94 aa16.01■□□□□ 0.15
SNIP1-203ENST00000493916 OTORQ9NRC9 128 aa16.01■□□□□ 0.15
SNIP1-203ENST00000493916 DNAH6Q9C0G6 4158 aa16.01■□□□□ 0.15
SNIP1-203ENST00000493916 ZNF324O75467 553 aaPredicted RBP16■□□□□ 0.15
SNIP1-203ENST00000493916 CDC34P49427 236 aaPredicted RBP16■□□□□ 0.15
SNIP1-203ENST00000493916 ZNF138P52744 262 aa16■□□□□ 0.15
SNIP1-203ENST00000493916 CD300CQ08708 224 aa16■□□□□ 0.15
SNIP1-203ENST00000493916 BTN1A1Q13410 526 aa16■□□□□ 0.15
SNIP1-203ENST00000493916 RXFP4Q8TDU9 374 aa16■□□□□ 0.15
SNIP1-203ENST00000493916 NOP10Q9NPE3 64 aaKnown RBP16■□□□□ 0.15
SNIP1-203ENST00000493916 DIRC3C9JPN6 131 aa15.99■□□□□ 0.15
SNIP1-203ENST00000493916 GPX1P07203 203 aa15.99■□□□□ 0.15
SNIP1-203ENST00000493916 RPL7L1Q6DKI1 246 aaKnown RBP15.99■□□□□ 0.15
SNIP1-203ENST00000493916 GNPNAT1Q96EK6 184 aaPredicted RBP15.99■□□□□ 0.15
SNIP1-203ENST00000493916 SH3BGRL3Q9H299 93 aa15.99■□□□□ 0.15
SNIP1-203ENST00000493916 BORCS7-ASMTA0A0B4J1R7 106 aa15.98■□□□□ 0.15
SNIP1-203ENST00000493916 CBY3A6NI87 242 aa15.98■□□□□ 0.15
SNIP1-203ENST00000493916 STAG3L2P0CL84 134 aa15.98■□□□□ 0.15
SNIP1-203ENST00000493916 STAG3L3P0CL85 134 aa15.98■□□□□ 0.15
SNIP1-203ENST00000493916 P0DMU3 169 aa15.98■□□□□ 0.15
SNIP1-203ENST00000493916 FAM231AP0DMU4 169 aa15.98■□□□□ 0.15
SNIP1-203ENST00000493916 FAM231CP0DMU5 169 aa15.98■□□□□ 0.15
SNIP1-203ENST00000493916 RNASE4P34096 147 aaKnown RBP15.98■□□□□ 0.15
SNIP1-203ENST00000493916 FAM74A1Q5RGS3 127 aa15.98■□□□□ 0.15
SNIP1-203ENST00000493916 ARL6IP6Q8N6S5 226 aa15.98■□□□□ 0.15
SNIP1-203ENST00000493916 LINC00612Q8N6U2 182 aa15.98■□□□□ 0.15
SNIP1-203ENST00000493916 Q8TAT8 98 aa15.98■□□□□ 0.15
SNIP1-203ENST00000493916 HMGB3O15347 200 aaKnown RBP15.97■□□□□ 0.15
SNIP1-203ENST00000493916 ARL14EPLP0DKL9 152 aa15.97■□□□□ 0.15
SNIP1-203ENST00000493916 PRR9Q5T870 116 aa15.97■□□□□ 0.15
SNIP1-203ENST00000493916 TMEM88Q6PEY1 159 aa15.97■□□□□ 0.15
SNIP1-203ENST00000493916 ZNF680Q8NEM1 530 aa15.97■□□□□ 0.15
SNIP1-203ENST00000493916 RAB24Q969Q5 203 aa15.97■□□□□ 0.15
SNIP1-203ENST00000493916 PGPA6NDG6 321 aa15.96■□□□□ 0.15
SNIP1-203ENST00000493916 SNURFLB1AK76 121 aa15.96■□□□□ 0.15
SNIP1-203ENST00000493916 ATP5G1P05496 136 aa15.96■□□□□ 0.15
SNIP1-203ENST00000493916 ATP5G3P48201 142 aa15.96■□□□□ 0.15
SNIP1-203ENST00000493916 ANXA2RQ3ZCQ2 193 aa15.96■□□□□ 0.15
SNIP1-203ENST00000493916 CMTM2Q8TAZ6 248 aa15.96■□□□□ 0.15
SNIP1-203ENST00000493916 SUN5Q8TC36 379 aa15.96■□□□□ 0.15
SNIP1-203ENST00000493916 TMED6Q8WW62 240 aa15.96■□□□□ 0.15
SNIP1-203ENST00000493916 LENEPQ9Y5L5 61 aa15.96■□□□□ 0.15
SNIP1-203ENST00000493916 TAAR5O14804 337 aa15.95■□□□□ 0.14
SNIP1-203ENST00000493916 DAZ2Q13117 558 aaKnown RBP15.95■□□□□ 0.14
SNIP1-203ENST00000493916 EIF4E3Q8N5X7 224 aaKnown RBP15.95■□□□□ 0.14
SNIP1-203ENST00000493916 HYLS1Q96M11 299 aa15.95■□□□□ 0.14
SNIP1-203ENST00000493916 ARPC5O15511 151 aa15.94■□□□□ 0.14
SNIP1-203ENST00000493916 POM121L12Q8N7R1 296 aa15.94■□□□□ 0.14
SNIP1-203ENST00000493916 C15orf53Q8NAA6 179 aa15.94■□□□□ 0.14
SNIP1-203ENST00000493916 C11orf72Q8NBR9 251 aa15.94■□□□□ 0.14
SNIP1-203ENST00000493916 ACTR3CQ9C0K3 210 aaPredicted RBP15.94■□□□□ 0.14
SNIP1-203ENST00000493916 GCHFRP30047 84 aa15.93■□□□□ 0.14
SNIP1-203ENST00000493916 F5H768 121 aa15.92■□□□□ 0.14
SNIP1-203ENST00000493916 CXorf1O96002 111 aa15.92■□□□□ 0.14
SNIP1-203ENST00000493916 ST6GAL2Q96JF0 529 aa15.92■□□□□ 0.14
SNIP1-203ENST00000493916 SMLR1H3BR10 107 aa15.91■□□□□ 0.14
SNIP1-203ENST00000493916 RGS13O14921 159 aa15.91■□□□□ 0.14
SNIP1-203ENST00000493916 IBA57Q5T440 356 aaKnown RBP15.91■□□□□ 0.14
SNIP1-203ENST00000493916 TMEM167BQ9NRX6 74 aa15.91■□□□□ 0.14
SNIP1-203ENST00000493916 RPH3ALQ9UNE2 315 aa15.91■□□□□ 0.14
SNIP1-203ENST00000493916 DNAH10Q8IVF4 4471 aa15.91■□□□□ 0.14
SNIP1-203ENST00000493916 IGHV1OR15-1A0A075B7D0 117 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms