RNA–Protein interactions for RNA: ENST00000493853.1

RBM39-238, Transcript of RNA binding motif protein 39, humanhuman

TSL 4

Gene RBM39, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-238ENST00000493853 STX12Q86Y82 276 aa5.3□□□□□ -1.56
RBM39-238ENST00000493853 ZNF431Q8TF32 576 aaPredicted RBP5.3□□□□□ -1.56
RBM39-238ENST00000493853 NTN5Q8WTR8 489 aaPredicted RBP5.3□□□□□ -1.56
RBM39-238ENST00000493853 TMEM263Q8WUH6 116 aaKnown RBP5.3□□□□□ -1.56
RBM39-238ENST00000493853 C2orf50Q96LR7 162 aa5.3□□□□□ -1.56
RBM39-238ENST00000493853 PFDN5Q99471 154 aa5.3□□□□□ -1.56
RBM39-238ENST00000493853 SDHCQ99643 169 aaPredicted RBP5.3□□□□□ -1.56
RBM39-238ENST00000493853 MGST2Q99735 147 aa5.3□□□□□ -1.56
RBM39-238ENST00000493853 C20orf144Q9BQM9 153 aa5.3□□□□□ -1.56
RBM39-238ENST00000493853 NUDT15Q9NV35 164 aa5.3□□□□□ -1.56
RBM39-238ENST00000493853 UQCC1Q9NVA1 299 aa5.3□□□□□ -1.56
RBM39-238ENST00000493853 NDUFA13Q9P0J0 144 aa5.3□□□□□ -1.56
RBM39-238ENST00000493853 TRAV12-3A0A0B4J271 114 aa5.29□□□□□ -1.56
RBM39-238ENST00000493853 FAM240BA0A1B0GVZ2 78 aa5.29□□□□□ -1.56
RBM39-238ENST00000493853 FAM24AA6NFZ4 105 aa5.29□□□□□ -1.56
RBM39-238ENST00000493853 MRPS12O15235 138 aaKnown RBP5.29□□□□□ -1.56
RBM39-238ENST00000493853 RLN2P04090 185 aa5.29□□□□□ -1.56
RBM39-238ENST00000493853 LEPP41159 167 aa5.29□□□□□ -1.56
RBM39-238ENST00000493853 OPCMLQ14982 345 aa5.29□□□□□ -1.56
RBM39-238ENST00000493853 MIC13Q5XKP0 118 aa5.29□□□□□ -1.56
RBM39-238ENST00000493853 TMEM37Q8WXS4 190 aa5.29□□□□□ -1.56
RBM39-238ENST00000493853 GNPNAT1Q96EK6 184 aaPredicted RBP5.29□□□□□ -1.56
RBM39-238ENST00000493853 SEC22CQ9BRL7 303 aa5.29□□□□□ -1.56
RBM39-238ENST00000493853 TIMM9Q9Y5J7 89 aa5.29□□□□□ -1.56
RBM39-238ENST00000493853 FRAS1Q86XX4 4008 aa5.28□□□□□ -1.56
RBM39-238ENST00000493853 TRAV5A0A0B4J249 113 aa5.28□□□□□ -1.56
RBM39-238ENST00000493853 NBDYA0A0U1RRE5 68 aa5.28□□□□□ -1.56
RBM39-238ENST00000493853 UBE2L5PA0A1B0GUS4 154 aa5.28□□□□□ -1.56
RBM39-238ENST00000493853 PLAC8L1A1L4L8 177 aa5.28□□□□□ -1.56
RBM39-238ENST00000493853 H3BQ15 152 aa5.28□□□□□ -1.56
RBM39-238ENST00000493853 SLC17A3O00476 420 aa5.28□□□□□ -1.56
RBM39-238ENST00000493853 PLA2G10O15496 165 aa5.28□□□□□ -1.56
RBM39-238ENST00000493853 GAGE7O76087 117 aa5.28□□□□□ -1.56
RBM39-238ENST00000493853 GAGE12FP0CL80 117 aa5.28□□□□□ -1.56
RBM39-238ENST00000493853 GAGE12GP0CL81 117 aa5.28□□□□□ -1.56
RBM39-238ENST00000493853 GAGE12IP0CL82 117 aa5.28□□□□□ -1.56
RBM39-238ENST00000493853 FGF7P21781 194 aa5.28□□□□□ -1.56
RBM39-238ENST00000493853 RPL29P47914 159 aaKnown RBP5.28□□□□□ -1.56
RBM39-238ENST00000493853 SULT1A1P50225 295 aa5.28□□□□□ -1.56
RBM39-238ENST00000493853 ATP6V1FQ16864 119 aa5.28□□□□□ -1.56
RBM39-238ENST00000493853 MZT2BQ6NZ67 158 aa5.28□□□□□ -1.56
RBM39-238ENST00000493853 SSX7Q7RTT5 188 aa5.28□□□□□ -1.56
RBM39-238ENST00000493853 RNASE8Q8TDE3 154 aaKnown RBP5.28□□□□□ -1.56
RBM39-238ENST00000493853 SAT2Q96F10 170 aaPredicted RBP5.28□□□□□ -1.56
RBM39-238ENST00000493853 PARD6GQ9BYG4 376 aaPredicted RBP5.28□□□□□ -1.56
RBM39-238ENST00000493853 GPN1Q9HCN4 374 aaPredicted RBP5.28□□□□□ -1.56
RBM39-238ENST00000493853 SLC39A9Q9NUM3 307 aa5.28□□□□□ -1.56
RBM39-238ENST00000493853 TRGV2A0A075B6R0 118 aa5.27□□□□□ -1.57
RBM39-238ENST00000493853 TRAV26-1A0A087WT03 109 aa5.27□□□□□ -1.57
RBM39-238ENST00000493853 PRAC2D3DTV9 90 aa5.27□□□□□ -1.57
RBM39-238ENST00000493853 CT45A10P0DMU9 189 aa5.27□□□□□ -1.57
RBM39-238ENST00000493853 IGLC2P0DOY2 106 aa5.27□□□□□ -1.57
RBM39-238ENST00000493853 M6PRP20645 277 aa5.27□□□□□ -1.57
RBM39-238ENST00000493853 GFI1BQ5VTD9 330 aa5.27□□□□□ -1.57
RBM39-238ENST00000493853 MORN5Q5VZ52 161 aa5.27□□□□□ -1.57
RBM39-238ENST00000493853 C6orf223Q8N319 242 aa5.27□□□□□ -1.57
RBM39-238ENST00000493853 BLNKQ8WV28 456 aa5.27□□□□□ -1.57
RBM39-238ENST00000493853 LINC00477Q96M19 166 aa5.27□□□□□ -1.57
RBM39-238ENST00000493853 PYGO2Q9BRQ0 406 aa5.27□□□□□ -1.57
RBM39-238ENST00000493853 CCDC32Q9BV29 185 aa5.27□□□□□ -1.57
RBM39-238ENST00000493853 AAMDCQ9H7C9 122 aa5.27□□□□□ -1.57
RBM39-238ENST00000493853 Q9H8V8 135 aa5.27□□□□□ -1.57
RBM39-238ENST00000493853 LYRM2Q9NU23 88 aaPredicted RBP5.27□□□□□ -1.57
RBM39-238ENST00000493853 PRELID1Q9Y255 219 aa5.27□□□□□ -1.57
RBM39-238ENST00000493853 WDR83OSQ9Y284 106 aa5.27□□□□□ -1.57
RBM39-238ENST00000493853 VPS13DQ5THJ4 4388 aa5.27□□□□□ -1.57
RBM39-238ENST00000493853 TRBV19A0A075B6N1 114 aa5.26□□□□□ -1.57
RBM39-238ENST00000493853 A0A0J9YY99 117 aa5.26□□□□□ -1.57
RBM39-238ENST00000493853 ZNF253O75346 499 aa5.26□□□□□ -1.57
RBM39-238ENST00000493853 MPDU1O75352 247 aa5.26□□□□□ -1.57
RBM39-238ENST00000493853 SLC25A5P05141 298 aaKnown RBP5.26□□□□□ -1.57
RBM39-238ENST00000493853 GPX1P07203 203 aa5.26□□□□□ -1.57
RBM39-238ENST00000493853 HIST1H1EP10412 219 aaKnown RBP5.26□□□□□ -1.57
RBM39-238ENST00000493853 RNASE4P34096 147 aaKnown RBP5.26□□□□□ -1.57
RBM39-238ENST00000493853 RAB32Q13637 225 aa5.26□□□□□ -1.57
RBM39-238ENST00000493853 TTC32Q5I0X7 151 aa5.26□□□□□ -1.57
RBM39-238ENST00000493853 TMEM78Q5T7P6 136 aa5.26□□□□□ -1.57
RBM39-238ENST00000493853 TMEM252Q8N6L7 170 aa5.26□□□□□ -1.57
RBM39-238ENST00000493853 ZNRF2Q8NHG8 242 aa5.26□□□□□ -1.57
RBM39-238ENST00000493853 RXFP4Q8TDU9 374 aa5.26□□□□□ -1.57
RBM39-238ENST00000493853 ODF3Q96PU9 254 aa5.26□□□□□ -1.57
RBM39-238ENST00000493853 SLC25A31Q9H0C2 315 aa5.26□□□□□ -1.57
RBM39-238ENST00000493853 ZNF586Q9NXT0 402 aa5.26□□□□□ -1.57
RBM39-238ENST00000493853 LINC00588Q9Y4M8 146 aa5.26□□□□□ -1.57
RBM39-238ENST00000493853 DNAH10Q8IVF4 4471 aa5.26□□□□□ -1.57
RBM39-238ENST00000493853 IGSF23A1L1A6 192 aa5.25□□□□□ -1.57
RBM39-238ENST00000493853 C7orf71A4D174 169 aa5.25□□□□□ -1.57
RBM39-238ENST00000493853 C16orf90A8MZG2 172 aa5.25□□□□□ -1.57
RBM39-238ENST00000493853 M0R3E3 92 aa5.25□□□□□ -1.57
RBM39-238ENST00000493853 DAZ2Q13117 558 aaKnown RBP5.25□□□□□ -1.57
RBM39-238ENST00000493853 ERCC8Q13216 396 aa5.25□□□□□ -1.57
RBM39-238ENST00000493853 PDE6HQ13956 83 aa5.25□□□□□ -1.57
RBM39-238ENST00000493853 VWC2Q2TAL6 325 aa5.25□□□□□ -1.57
RBM39-238ENST00000493853 EIF4E3Q8N5X7 224 aaKnown RBP5.25□□□□□ -1.57
RBM39-238ENST00000493853 ZNF680Q8NEM1 530 aa5.25□□□□□ -1.57
RBM39-238ENST00000493853 ENKURQ8TC29 256 aa5.25□□□□□ -1.57
RBM39-238ENST00000493853 S100ZQ8WXG8 99 aa5.25□□□□□ -1.57
RBM39-238ENST00000493853 MRPL53Q96EL3 112 aaKnown RBP5.25□□□□□ -1.57
RBM39-238ENST00000493853 TMEM14CQ9P0S9 112 aa5.25□□□□□ -1.57
RBM39-238ENST00000493853 TNFRSF18Q9Y5U5 241 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 139.8 ms