RNA–Protein interactions for RNA: ENST00000493727.5

UPF3A-210, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 937 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-210ENST00000493727 SUN5Q8TC36 379 aa9.02□□□□□ -0.97
UPF3A-210ENST00000493727 KRTAP4-7Q9BYR0 210 aa9.02□□□□□ -0.97
UPF3A-210ENST00000493727 Q9H3A6 140 aa9.02□□□□□ -0.97
UPF3A-210ENST00000493727 HERC2O95714 4834 aa9.02□□□□□ -0.97
UPF3A-210ENST00000493727 A0A1W2PRE2 83 aa9.01□□□□□ -0.97
UPF3A-210ENST00000493727 FAM74A7A6NL05 159 aa9.01□□□□□ -0.97
UPF3A-210ENST00000493727 K7EQG2 157 aa9.01□□□□□ -0.97
UPF3A-210ENST00000493727 ISLRO14498 428 aa9.01□□□□□ -0.97
UPF3A-210ENST00000493727 ZNF688P0C7X2 276 aa9.01□□□□□ -0.97
UPF3A-210ENST00000493727 BCL2P10415 239 aa9.01□□□□□ -0.97
UPF3A-210ENST00000493727 TAGLN2P37802 199 aaKnown RBP9.01□□□□□ -0.97
UPF3A-210ENST00000493727 CSN1S1P47710 185 aa9.01□□□□□ -0.97
UPF3A-210ENST00000493727 KMT2AQ03164 3969 aa9.01□□□□□ -0.97
UPF3A-210ENST00000493727 TOR2AQ5JU69 321 aa9.01□□□□□ -0.97
UPF3A-210ENST00000493727 IGFL4Q6B9Z1 124 aa9.01□□□□□ -0.97
UPF3A-210ENST00000493727 LYPD1Q8N2G4 141 aa9.01□□□□□ -0.97
UPF3A-210ENST00000493727 EXOC3-AS1Q8N2X6 119 aa9.01□□□□□ -0.97
UPF3A-210ENST00000493727 ZNF738Q8NE65 137 aa9.01□□□□□ -0.97
UPF3A-210ENST00000493727 LYPD6BQ8NI32 183 aa9.01□□□□□ -0.97
UPF3A-210ENST00000493727 DCANP1Q8TF63 244 aa9.01□□□□□ -0.97
UPF3A-210ENST00000493727 EIF5A2Q9GZV4 153 aaKnown RBP9.01□□□□□ -0.97
UPF3A-210ENST00000493727 ZNF331Q9NQX6 463 aaPredicted RBP9.01□□□□□ -0.97
UPF3A-210ENST00000493727 OTORQ9NRC9 128 aa9.01□□□□□ -0.97
UPF3A-210ENST00000493727 CLEC5AQ9NY25 188 aa9.01□□□□□ -0.97
UPF3A-210ENST00000493727 RPH3ALQ9UNE2 315 aa9.01□□□□□ -0.97
UPF3A-210ENST00000493727 YTHDF2Q9Y5A9 579 aaKnown RBP9.01□□□□□ -0.97
UPF3A-210ENST00000493727 ARL2-SNX15V9GYD0 113 aa9.01□□□□□ -0.97
UPF3A-210ENST00000493727 PGPA6NDG6 321 aa9□□□□□ -0.97
UPF3A-210ENST00000493727 C11orf94C9JXX5 98 aa9□□□□□ -0.97
UPF3A-210ENST00000493727 SOCS3O14543 225 aa9□□□□□ -0.97
UPF3A-210ENST00000493727 NDUFB4O95168 129 aa9□□□□□ -0.97
UPF3A-210ENST00000493727 SLC25A5P05141 298 aaKnown RBP9□□□□□ -0.97
UPF3A-210ENST00000493727 CMC4P56277 68 aaPredicted RBP9□□□□□ -0.97
UPF3A-210ENST00000493727 PSMG4Q5JS54 123 aa9□□□□□ -0.97
UPF3A-210ENST00000493727 RNF182Q8N6D2 247 aa9□□□□□ -0.97
UPF3A-210ENST00000493727 IL17DQ8TAD2 202 aa9□□□□□ -0.97
UPF3A-210ENST00000493727 NKX6-2Q9C056 277 aaPredicted RBP9□□□□□ -0.97
UPF3A-210ENST00000493727 PRELID1Q9Y255 219 aa9□□□□□ -0.97
UPF3A-210ENST00000493727 TRAV8-2A0A0B4J237 113 aa8.99□□□□□ -0.97
UPF3A-210ENST00000493727 LOC102723971A0A1B0GUV8 181 aa8.99□□□□□ -0.97
UPF3A-210ENST00000493727 RBFOX3A6NFN3 312 aa8.99□□□□□ -0.97
UPF3A-210ENST00000493727 GGTLC3B5MD39 225 aa8.99□□□□□ -0.97
UPF3A-210ENST00000493727 HLA-DMBP28068 263 aa8.99□□□□□ -0.97
UPF3A-210ENST00000493727 ATP5G3P48201 142 aa8.99□□□□□ -0.97
UPF3A-210ENST00000493727 FAM24BQ8N5W8 94 aa8.99□□□□□ -0.97
UPF3A-210ENST00000493727 RXFP4Q8TDU9 374 aa8.99□□□□□ -0.97
UPF3A-210ENST00000493727 FAM210AQ96ND0 272 aa8.99□□□□□ -0.97
UPF3A-210ENST00000493727 KRTAP9-3Q9BYQ3 159 aa8.99□□□□□ -0.97
UPF3A-210ENST00000493727 VAX2Q9UIW0 290 aa8.99□□□□□ -0.97
UPF3A-210ENST00000493727 OR11H12B2RN74 326 aa8.98□□□□□ -0.97
UPF3A-210ENST00000493727 DEFB131AP59861 70 aa8.98□□□□□ -0.97
UPF3A-210ENST00000493727 MEF2BQ02080 365 aaPredicted RBP8.98□□□□□ -0.97
UPF3A-210ENST00000493727 PMS2P11Q13670 270 aa8.98□□□□□ -0.97
UPF3A-210ENST00000493727 PSG3Q16557 428 aa8.98□□□□□ -0.97
UPF3A-210ENST00000493727 C5orf17Q8NAS9 161 aa8.98□□□□□ -0.97
UPF3A-210ENST00000493727 TXNDC17Q9BRA2 123 aa8.98□□□□□ -0.97
UPF3A-210ENST00000493727 ZNF705FA8MVS1 300 aaPredicted RBP8.97□□□□□ -0.97
UPF3A-210ENST00000493727 F6UZH7 168 aa8.97□□□□□ -0.97
UPF3A-210ENST00000493727 M0R3E3 92 aa8.97□□□□□ -0.97
UPF3A-210ENST00000493727 CD81P60033 236 aa8.97□□□□□ -0.97
UPF3A-210ENST00000493727 GNG5P63218 68 aa8.97□□□□□ -0.97
UPF3A-210ENST00000493727 PEA15Q15121 130 aa8.97□□□□□ -0.97
UPF3A-210ENST00000493727 ZNF506Q5JVG8 444 aa8.97□□□□□ -0.97
UPF3A-210ENST00000493727 COMMD7Q86VX2 200 aa8.97□□□□□ -0.97
UPF3A-210ENST00000493727 RPUSD4Q96CM3 377 aaKnown RBP8.97□□□□□ -0.97
UPF3A-210ENST00000493727 MRPL53Q96EL3 112 aaKnown RBP8.97□□□□□ -0.97
UPF3A-210ENST00000493727 RARRES2Q99969 163 aa8.97□□□□□ -0.97
UPF3A-210ENST00000493727 MAP6D1Q9H9H5 199 aa8.97□□□□□ -0.97
UPF3A-210ENST00000493727 DNAH10Q8IVF4 4471 aa8.97□□□□□ -0.97
UPF3A-210ENST00000493727 K7EQM0 130 aa8.96□□□□□ -0.98
UPF3A-210ENST00000493727 PEX7O00628 323 aa8.96□□□□□ -0.98
UPF3A-210ENST00000493727 PDE6DO43924 150 aa8.96□□□□□ -0.98
UPF3A-210ENST00000493727 PRB4P10163 310 aaPredicted RBP8.96□□□□□ -0.98
UPF3A-210ENST00000493727 AKR1C3P42330 323 aa8.96□□□□□ -0.98
UPF3A-210ENST00000493727 CEBPGP53567 150 aa8.96□□□□□ -0.98
UPF3A-210ENST00000493727 EBLN2Q6P2I7 272 aa8.96□□□□□ -0.98
UPF3A-210ENST00000493727 GOLT1AQ6ZVE7 132 aa8.96□□□□□ -0.98
UPF3A-210ENST00000493727 FAM110AQ9BQ89 295 aa8.96□□□□□ -0.98
UPF3A-210ENST00000493727 TCEAL7Q9BRU2 100 aa8.96□□□□□ -0.98
UPF3A-210ENST00000493727 TREM1Q9NP99 234 aa8.96□□□□□ -0.98
UPF3A-210ENST00000493727 EPDR1Q9UM22 224 aa8.96□□□□□ -0.98
UPF3A-210ENST00000493727 IGKV2-40A0A087WW87 121 aaPredicted RBP8.95□□□□□ -0.98
UPF3A-210ENST00000493727 RAB19A4D1S5 217 aa8.95□□□□□ -0.98
UPF3A-210ENST00000493727 IGKV2D-40P01614 121 aaPredicted RBP8.95□□□□□ -0.98
UPF3A-210ENST00000493727 CD7P09564 240 aa8.95□□□□□ -0.98
UPF3A-210ENST00000493727 HIST1H1AQ02539 215 aaPredicted RBP8.95□□□□□ -0.98
UPF3A-210ENST00000493727 LINC00322Q6ZN03 302 aaPredicted RBP8.95□□□□□ -0.98
UPF3A-210ENST00000493727 OR10J6PQ8NGY7 276 aa8.95□□□□□ -0.98
UPF3A-210ENST00000493727 HIST1H2BAQ96A08 127 aa8.95□□□□□ -0.98
UPF3A-210ENST00000493727 ATG101Q9BSB4 218 aa8.95□□□□□ -0.98
UPF3A-210ENST00000493727 SERTM2A0A1B0GWG4 89 aa8.94□□□□□ -0.98
UPF3A-210ENST00000493727 LINC00862A6NCI5 91 aa8.94□□□□□ -0.98
UPF3A-210ENST00000493727 DIRC3C9JPN6 131 aa8.94□□□□□ -0.98
UPF3A-210ENST00000493727 TCRAP04437 139 aa8.94□□□□□ -0.98
UPF3A-210ENST00000493727 CNN1P51911 297 aaKnown RBP8.94□□□□□ -0.98
UPF3A-210ENST00000493727 ODF3L2Q3SX64 289 aa8.94□□□□□ -0.98
UPF3A-210ENST00000493727 FOXI2Q6ZQN5 318 aa8.94□□□□□ -0.98
UPF3A-210ENST00000493727 APRG1Q8IVJ8 170 aa8.94□□□□□ -0.98
UPF3A-210ENST00000493727 CCDC28AQ8IWP9 274 aa8.94□□□□□ -0.98
UPF3A-210ENST00000493727 ARL6IP6Q8N6S5 226 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 313.8 ms