RNA–Protein interactions for RNA: ENST00000493683.5

RNF40-203, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 5,371 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-203ENST00000493683 RIF1Q5UIP0 2472 aaKnown RBP16.09■□□□□ 0.17
RNF40-203ENST00000493683 DEFB130BP0DP73 79 aa16.09■□□□□ 0.17
RNF40-203ENST00000493683 DEFB130AP0DP74 79 aa16.09■□□□□ 0.17
RNF40-203ENST00000493683 CDKN1BP46527 198 aa16.09■□□□□ 0.17
RNF40-203ENST00000493683 PRO1854Q9UHT4 67 aa16.09■□□□□ 0.17
RNF40-203ENST00000493683 IGHV2-70DA0A0C4DH43 119 aa16.09■□□□□ 0.17
RNF40-203ENST00000493683 IGKV1-39P01597 117 aa16.09■□□□□ 0.17
RNF40-203ENST00000493683 IGKV1D-39P04432 117 aa16.09■□□□□ 0.17
RNF40-203ENST00000493683 TRAV13-2A0A0B4J235 113 aa16.08■□□□□ 0.17
RNF40-203ENST00000493683 POU2AF1Q16633 256 aa16.08■□□□□ 0.17
RNF40-203ENST00000493683 NDUFA12Q9UI09 145 aa16.08■□□□□ 0.16
RNF40-203ENST00000493683 DEFB121Q5J5C9 76 aa16.08■□□□□ 0.16
RNF40-203ENST00000493683 SIGLEC8Q9NYZ4 499 aa16.08■□□□□ 0.16
RNF40-203ENST00000493683 LRRK1Q38SD2 2015 aa16.08■□□□□ 0.16
RNF40-203ENST00000493683 CEACAM8P31997 349 aaPredicted RBP16.07■□□□□ 0.16
RNF40-203ENST00000493683 IGFL3Q6UXB1 125 aa16.07■□□□□ 0.16
RNF40-203ENST00000493683 GAGE12JA6NER3 117 aa16.07■□□□□ 0.16
RNF40-203ENST00000493683 GAGE4Q13068 117 aa16.07■□□□□ 0.16
RNF40-203ENST00000493683 GAGE5Q13069 117 aa16.07■□□□□ 0.16
RNF40-203ENST00000493683 CEND1Q8N111 149 aa16.07■□□□□ 0.16
RNF40-203ENST00000493683 K7EP13 123 aa16.07■□□□□ 0.16
RNF40-203ENST00000493683 AZU1P20160 251 aa16.07■□□□□ 0.16
RNF40-203ENST00000493683 PRSS57Q6UWY2 283 aa16.07■□□□□ 0.16
RNF40-203ENST00000493683 J3QLI3 93 aa16.06■□□□□ 0.16
RNF40-203ENST00000493683 HERVK_113P63121 156 aa16.06■□□□□ 0.16
RNF40-203ENST00000493683 SPINK13Q1W4C9 94 aa16.06■□□□□ 0.16
RNF40-203ENST00000493683 IGLL1P15814 213 aa16.06■□□□□ 0.16
RNF40-203ENST00000493683 LOXP28300 417 aaPredicted RBP16.06■□□□□ 0.16
RNF40-203ENST00000493683 C8orf31Q8N9H6 132 aa16.06■□□□□ 0.16
RNF40-203ENST00000493683 C15orf65H3BRN8 121 aa16.06■□□□□ 0.16
RNF40-203ENST00000493683 H3BUA1 57 aa16.06■□□□□ 0.16
RNF40-203ENST00000493683 A0A1W2PPM0 123 aa16.06■□□□□ 0.16
RNF40-203ENST00000493683 FGF6P10767 208 aa16.05■□□□□ 0.16
RNF40-203ENST00000493683 HLA-DMBP28068 263 aa16.05■□□□□ 0.16
RNF40-203ENST00000493683 WIPF2Q8TF74 440 aaPredicted RBP16.05■□□□□ 0.16
RNF40-203ENST00000493683 ANXA2RQ3ZCQ2 193 aa16.05■□□□□ 0.16
RNF40-203ENST00000493683 BVES-AS1Q5T3Y7 98 aa16.05■□□□□ 0.16
RNF40-203ENST00000493683 Q6ZR03 302 aa16.05■□□□□ 0.16
RNF40-203ENST00000493683 DAD1P61803 113 aa16.05■□□□□ 0.16
RNF40-203ENST00000493683 A0A1B0GUS0 222 aa16.04■□□□□ 0.16
RNF40-203ENST00000493683 NCOR1O75376 2440 aa16.04■□□□□ 0.16
RNF40-203ENST00000493683 C3orf56Q8N813 242 aa16.04■□□□□ 0.16
RNF40-203ENST00000493683 NKAPP1Q8N9T2 125 aa16.04■□□□□ 0.16
RNF40-203ENST00000493683 FXYD5Q96DB9 178 aa16.04■□□□□ 0.16
RNF40-203ENST00000493683 RSPO3Q9BXY4 272 aaPredicted RBP16.04■□□□□ 0.16
RNF40-203ENST00000493683 TSSC4Q9Y5U2 329 aaPredicted RBP16.04■□□□□ 0.16
RNF40-203ENST00000493683 IGLV1-44P01699 117 aa16.04■□□□□ 0.16
RNF40-203ENST00000493683 HOXD3P31249 432 aaPredicted RBP16.04■□□□□ 0.16
RNF40-203ENST00000493683 WT1-ASQ06250 92 aa16.04■□□□□ 0.16
RNF40-203ENST00000493683 MRPL53Q96EL3 112 aaKnown RBP16.04■□□□□ 0.16
RNF40-203ENST00000493683 XCL2Q9UBD3 114 aa16.04■□□□□ 0.16
RNF40-203ENST00000493683 SIP14410 1827 aa16.04■□□□□ 0.16
RNF40-203ENST00000493683 THADAQ6YHU6 1953 aa16.04■□□□□ 0.16
RNF40-203ENST00000493683 MRPL35Q9NZE8 188 aaKnown RBP16.03■□□□□ 0.16
RNF40-203ENST00000493683 K7ENP7 123 aa16.03■□□□□ 0.16
RNF40-203ENST00000493683 XIRP1Q702N8 1843 aaKnown RBP16.03■□□□□ 0.16
RNF40-203ENST00000493683 LTAP01374 205 aa16.03■□□□□ 0.16
RNF40-203ENST00000493683 TMEM126AQ9H061 195 aa16.03■□□□□ 0.16
RNF40-203ENST00000493683 ABCA4P78363 2273 aa16.02■□□□□ 0.16
RNF40-203ENST00000493683 KNCNA6PVL3 124 aa16.02■□□□□ 0.16
RNF40-203ENST00000493683 IGLC1P0CG04 106 aa16.02■□□□□ 0.16
RNF40-203ENST00000493683 IFITM1P13164 125 aa16.02■□□□□ 0.16
RNF40-203ENST00000493683 ZNF134P52741 427 aa16.02■□□□□ 0.16
RNF40-203ENST00000493683 PRR20EP86478 221 aa16.02■□□□□ 0.16
RNF40-203ENST00000493683 PRR20CP86479 221 aa16.02■□□□□ 0.16
RNF40-203ENST00000493683 PRR20DP86480 221 aa16.02■□□□□ 0.16
RNF40-203ENST00000493683 PRR20BP86481 221 aa16.02■□□□□ 0.16
RNF40-203ENST00000493683 PRR20AP86496 221 aa16.02■□□□□ 0.16
RNF40-203ENST00000493683 KLF5Q13887 457 aaPredicted RBP16.02■□□□□ 0.16
RNF40-203ENST00000493683 WDR86Q86TI4 376 aa16.02■□□□□ 0.16
RNF40-203ENST00000493683 VOPP1Q96AW1 172 aa16.02■□□□□ 0.16
RNF40-203ENST00000493683 LENEPQ9Y5L5 61 aa16.02■□□□□ 0.16
RNF40-203ENST00000493683 IGLV3-9A0A075B6K5 115 aa16.02■□□□□ 0.15
RNF40-203ENST00000493683 RMI2Q96E14 147 aa16.02■□□□□ 0.15
RNF40-203ENST00000493683 ZNF493Q6ZR52 646 aa16.02■□□□□ 0.15
RNF40-203ENST00000493683 KAAG1Q9UBP8 84 aa16.02■□□□□ 0.15
RNF40-203ENST00000493683 J3QQQ9 107 aa16.01■□□□□ 0.15
RNF40-203ENST00000493683 NPYP01303 97 aa16.01■□□□□ 0.15
RNF40-203ENST00000493683 IGLV3-1P01715 115 aa16.01■□□□□ 0.15
RNF40-203ENST00000493683 ZC2HC1AQ96GY0 325 aa16.01■□□□□ 0.15
RNF40-203ENST00000493683 ZNRD1Q9P1U0 126 aa16.01■□□□□ 0.15
RNF40-203ENST00000493683 KLK9Q9UKQ9 250 aa16.01■□□□□ 0.15
RNF40-203ENST00000493683 ETDBQ3ZM63 59 aa16.01■□□□□ 0.15
RNF40-203ENST00000493683 RUSC1-AS1Q66K80 236 aa16.01■□□□□ 0.15
RNF40-203ENST00000493683 MPDZO75970 2070 aa16.01■□□□□ 0.15
RNF40-203ENST00000493683 RHOHQ15669 191 aa16.01■□□□□ 0.15
RNF40-203ENST00000493683 RBAKDNA6NC62 111 aa16.01■□□□□ 0.15
RNF40-203ENST00000493683 ZNRF2Q8NHG8 242 aa16■□□□□ 0.15
RNF40-203ENST00000493683 ATP6V0BQ99437 205 aa16■□□□□ 0.15
RNF40-203ENST00000493683 APOC4P55056 127 aa16■□□□□ 0.15
RNF40-203ENST00000493683 LY6HO94772 140 aa16■□□□□ 0.15
RNF40-203ENST00000493683 PLXNA3P51805 1871 aa16■□□□□ 0.15
RNF40-203ENST00000493683 CACNA1BQ00975 2339 aa16■□□□□ 0.15
RNF40-203ENST00000493683 LINC01545Q5VT33 79 aa16■□□□□ 0.15
RNF40-203ENST00000493683 LYPD6BQ8NI32 183 aa16■□□□□ 0.15
RNF40-203ENST00000493683 ROS1P08922 2347 aa16■□□□□ 0.15
RNF40-203ENST00000493683 PFN2P35080 140 aa16■□□□□ 0.15
RNF40-203ENST00000493683 PROK2Q9HC23 129 aa15.99■□□□□ 0.15
RNF40-203ENST00000493683 IGHV7-4-1A0A0J9YVY3 117 aa15.99■□□□□ 0.15
RNF40-203ENST00000493683 G3V318 75 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms