RNA–Protein interactions for RNA: ENST00000493674.5

VPS52-220, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 878 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-220ENST00000493674 PSG8Q9UQ74 426 aa9.45□□□□□ -0.9
VPS52-220ENST00000493674 K7EN84 100 aa9.44□□□□□ -0.9
VPS52-220ENST00000493674 DNASE2O00115 360 aaPredicted RBP9.44□□□□□ -0.9
VPS52-220ENST00000493674 WIPF1O43516 503 aa9.44□□□□□ -0.9
VPS52-220ENST00000493674 SAP30O75446 220 aa9.44□□□□□ -0.9
VPS52-220ENST00000493674 RHEBQ15382 184 aa9.44□□□□□ -0.9
VPS52-220ENST00000493674 ATRAIDQ6UW56 229 aa9.44□□□□□ -0.9
VPS52-220ENST00000493674 ISOC2Q96AB3 205 aa9.44□□□□□ -0.9
VPS52-220ENST00000493674 MGAM2Q2M2H8 2515 aa9.44□□□□□ -0.9
VPS52-220ENST00000493674 NBEAL1Q6ZS30 2694 aa9.44□□□□□ -0.9
VPS52-220ENST00000493674 OR4C46A6NHA9 309 aa9.43□□□□□ -0.9
VPS52-220ENST00000493674 A8MTW9 85 aa9.43□□□□□ -0.9
VPS52-220ENST00000493674 B4DEV8 164 aa9.43□□□□□ -0.9
VPS52-220ENST00000493674 GCGP01275 180 aa9.43□□□□□ -0.9
VPS52-220ENST00000493674 ZNF688P0C7X2 276 aa9.43□□□□□ -0.9
VPS52-220ENST00000493674 PRB4P10163 310 aaPredicted RBP9.43□□□□□ -0.9
VPS52-220ENST00000493674 TFPI2P48307 235 aa9.43□□□□□ -0.9
VPS52-220ENST00000493674 INSL3P51460 131 aa9.43□□□□□ -0.9
VPS52-220ENST00000493674 SNRPD3P62318 126 aaKnown RBP9.43□□□□□ -0.9
VPS52-220ENST00000493674 SMUG1Q53HV7 270 aa9.43□□□□□ -0.9
VPS52-220ENST00000493674 PRR31Q5SQ13 230 aa9.43□□□□□ -0.9
VPS52-220ENST00000493674 BAGE2Q86Y30 109 aa9.43□□□□□ -0.9
VPS52-220ENST00000493674 WFDC3Q8IUB2 231 aa9.43□□□□□ -0.9
VPS52-220ENST00000493674 TMEM183AQ8IXX5 376 aa9.43□□□□□ -0.9
VPS52-220ENST00000493674 OR8A1Q8NGG7 326 aa9.43□□□□□ -0.9
VPS52-220ENST00000493674 SGK494Q96LW2 274 aa9.43□□□□□ -0.9
VPS52-220ENST00000493674 AGPAT4-IT1Q9H0P7 198 aa9.43□□□□□ -0.9
VPS52-220ENST00000493674 ZFP30Q9Y2G7 519 aa9.43□□□□□ -0.9
VPS52-220ENST00000493674 C7orf77A4D0Y5 90 aa9.42□□□□□ -0.9
VPS52-220ENST00000493674 DEFB1P60022 68 aa9.42□□□□□ -0.9
VPS52-220ENST00000493674 ADIRFQ15847 76 aa9.42□□□□□ -0.9
VPS52-220ENST00000493674 BEAN1Q3B7T3 259 aa9.42□□□□□ -0.9
VPS52-220ENST00000493674 PSMG4Q5JS54 123 aa9.42□□□□□ -0.9
VPS52-220ENST00000493674 C9orf66Q5T8R8 295 aa9.42□□□□□ -0.9
VPS52-220ENST00000493674 FAM19A4Q96LR4 140 aa9.42□□□□□ -0.9
VPS52-220ENST00000493674 PRR25Q96S07 402 aa9.42□□□□□ -0.9
VPS52-220ENST00000493674 FAM110AQ9BQ89 295 aa9.42□□□□□ -0.9
VPS52-220ENST00000493674 MAP6D1Q9H9H5 199 aa9.42□□□□□ -0.9
VPS52-220ENST00000493674 ZNF492Q9P255 531 aa9.42□□□□□ -0.9
VPS52-220ENST00000493674 LENEPQ9Y5L5 61 aa9.42□□□□□ -0.9
VPS52-220ENST00000493674 A0A087WWC5 75 aa9.41□□□□□ -0.9
VPS52-220ENST00000493674 TRBV7-9A0A0J9YWB2 115 aa9.41□□□□□ -0.9
VPS52-220ENST00000493674 A0A0J9YX75 114 aa9.41□□□□□ -0.9
VPS52-220ENST00000493674 M0R036 132 aa9.41□□□□□ -0.9
VPS52-220ENST00000493674 ZNF138P52744 262 aa9.41□□□□□ -0.9
VPS52-220ENST00000493674 ERCC8Q13216 396 aa9.41□□□□□ -0.9
VPS52-220ENST00000493674 ODF3L2Q3SX64 289 aa9.41□□□□□ -0.9
VPS52-220ENST00000493674 GDF5OSQ5U4N7 250 aa9.41□□□□□ -0.9
VPS52-220ENST00000493674 FOXI2Q6ZQN5 318 aa9.41□□□□□ -0.9
VPS52-220ENST00000493674 PRNTQ86SH4 94 aa9.41□□□□□ -0.9
VPS52-220ENST00000493674 Q8TAT8 98 aa9.41□□□□□ -0.9
VPS52-220ENST00000493674 ODF3Q96PU9 254 aa9.41□□□□□ -0.9
VPS52-220ENST00000493674 MCRIP2Q9BUT9 160 aaKnown RBP9.41□□□□□ -0.9
VPS52-220ENST00000493674 GPR61Q9BZJ8 451 aa9.41□□□□□ -0.9
VPS52-220ENST00000493674 SAV1Q9H4B6 383 aaPredicted RBP9.41□□□□□ -0.9
VPS52-220ENST00000493674 AURKAIP1Q9NWT8 199 aaPredicted RBP9.41□□□□□ -0.9
VPS52-220ENST00000493674 F6UB75 175 aa9.4□□□□□ -0.9
VPS52-220ENST00000493674 SAPCD1Q5SSQ6 148 aa9.4□□□□□ -0.9
VPS52-220ENST00000493674 TMEM78Q5T7P6 136 aa9.4□□□□□ -0.9
VPS52-220ENST00000493674 FAM231DQ6ZW35 169 aa9.4□□□□□ -0.9
VPS52-220ENST00000493674 APRG1Q8IVJ8 170 aa9.4□□□□□ -0.9
VPS52-220ENST00000493674 NHLRC2Q8NBF2 726 aa9.4□□□□□ -0.9
VPS52-220ENST00000493674 OR10J6PQ8NGY7 276 aa9.4□□□□□ -0.9
VPS52-220ENST00000493674 ZC2HC1AQ96GY0 325 aa9.4□□□□□ -0.9
VPS52-220ENST00000493674 LINC00477Q96M19 166 aa9.4□□□□□ -0.9
VPS52-220ENST00000493674 DNAH3Q8TD57 4116 aa9.39□□□□□ -0.91
VPS52-220ENST00000493674 C19orf71A6NCJ1 209 aa9.39□□□□□ -0.91
VPS52-220ENST00000493674 ZNF705DP0CH99 300 aaPredicted RBP9.39□□□□□ -0.91
VPS52-220ENST00000493674 ZNF705BP0CI00 300 aaPredicted RBP9.39□□□□□ -0.91
VPS52-220ENST00000493674 CT45A10P0DMU9 189 aa9.39□□□□□ -0.91
VPS52-220ENST00000493674 CRISP2P16562 243 aa9.39□□□□□ -0.91
VPS52-220ENST00000493674 CD33P20138 364 aa9.39□□□□□ -0.91
VPS52-220ENST00000493674 DEFB131AP59861 70 aa9.39□□□□□ -0.91
VPS52-220ENST00000493674 OR5I1Q13606 314 aa9.39□□□□□ -0.91
VPS52-220ENST00000493674 RNF212Q495C1 297 aa9.39□□□□□ -0.91
VPS52-220ENST00000493674 C8orf49Q96NF6 230 aa9.39□□□□□ -0.91
VPS52-220ENST00000493674 ASCL2Q99929 193 aa9.39□□□□□ -0.91
VPS52-220ENST00000493674 OSTCQ9NRP0 149 aa9.39□□□□□ -0.91
VPS52-220ENST00000493674 C19orf73Q9NVV2 129 aa9.39□□□□□ -0.91
VPS52-220ENST00000493674 TMEM242Q9NWH2 141 aa9.39□□□□□ -0.91
VPS52-220ENST00000493674 LOC105371267A0A1B0GV96 52 aa9.38□□□□□ -0.91
VPS52-220ENST00000493674 HLA-DRB4P13762 266 aa9.38□□□□□ -0.91
VPS52-220ENST00000493674 CRIP1P50238 77 aa9.38□□□□□ -0.91
VPS52-220ENST00000493674 HIST1H1AQ02539 215 aaPredicted RBP9.38□□□□□ -0.91
VPS52-220ENST00000493674 AMTNQ6UX39 209 aa9.38□□□□□ -0.91
VPS52-220ENST00000493674 LINC00322Q6ZN03 302 aaPredicted RBP9.38□□□□□ -0.91
VPS52-220ENST00000493674 ZFAND2AQ8N6M9 145 aa9.38□□□□□ -0.91
VPS52-220ENST00000493674 ANAPC16Q96DE5 110 aa9.38□□□□□ -0.91
VPS52-220ENST00000493674 SFRP2Q96HF1 295 aa9.38□□□□□ -0.91
VPS52-220ENST00000493674 CLUHP3Q96NS8 147 aa9.38□□□□□ -0.91
VPS52-220ENST00000493674 CTDSP1Q9GZU7 261 aa9.38□□□□□ -0.91
VPS52-220ENST00000493674 BIN3Q9NQY0 253 aa9.38□□□□□ -0.91
VPS52-220ENST00000493674 TMA7Q9Y2S6 64 aaKnown RBP9.38□□□□□ -0.91
VPS52-220ENST00000493674 HLA-DRB4X5D2U9 266 aa9.38□□□□□ -0.91
VPS52-220ENST00000493674 SCO1O75880 301 aa9.37□□□□□ -0.91
VPS52-220ENST00000493674 DUSP14O95147 198 aaKnown RBP9.37□□□□□ -0.91
VPS52-220ENST00000493674 MT-ND4LP03901 98 aa9.37□□□□□ -0.91
VPS52-220ENST00000493674 MGST1P10620 155 aaKnown RBP9.37□□□□□ -0.91
VPS52-220ENST00000493674 CMC4P56277 68 aaPredicted RBP9.37□□□□□ -0.91
VPS52-220ENST00000493674 NDFIP1Q9BT67 221 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms