RNA–Protein interactions for RNA: ENST00000493621.1

SAMM50-205, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 283 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-205ENST00000493621 C9orf170A2RU37 121 aa8.45□□□□□ -1.06
SAMM50-205ENST00000493621 EREGO14944 169 aa8.45□□□□□ -1.06
SAMM50-205ENST00000493621 AGPAT2O15120 278 aa8.45□□□□□ -1.06
SAMM50-205ENST00000493621 SIVA1O15304 175 aa8.45□□□□□ -1.06
SAMM50-205ENST00000493621 PLA2G10O15496 165 aa8.45□□□□□ -1.06
SAMM50-205ENST00000493621 SCGB1D2O95969 90 aa8.45□□□□□ -1.06
SAMM50-205ENST00000493621 XGP55808 180 aa8.45□□□□□ -1.06
SAMM50-205ENST00000493621 ERVFC1-1P60608 527 aa8.45□□□□□ -1.06
SAMM50-205ENST00000493621 LINC00518Q8N0U6 118 aa8.45□□□□□ -1.06
SAMM50-205ENST00000493621 PYGO2Q9BRQ0 406 aa8.45□□□□□ -1.06
SAMM50-205ENST00000493621 PXMP4Q9Y6I8 212 aa8.45□□□□□ -1.06
SAMM50-205ENST00000493621 NPIPB6E9PJ23 425 aa8.44□□□□□ -1.06
SAMM50-205ENST00000493621 H3BQ15 152 aa8.44□□□□□ -1.06
SAMM50-205ENST00000493621 IGLC2P0DOY2 106 aa8.44□□□□□ -1.06
SAMM50-205ENST00000493621 UBE2MP61081 183 aaKnown RBP8.44□□□□□ -1.06
SAMM50-205ENST00000493621 OPCMLQ14982 345 aa8.44□□□□□ -1.06
SAMM50-205ENST00000493621 Q5VSD8 79 aa8.44□□□□□ -1.06
SAMM50-205ENST00000493621 C10orf113Q5VZT2 155 aa8.44□□□□□ -1.06
SAMM50-205ENST00000493621 TMEM37Q8WXS4 190 aa8.44□□□□□ -1.06
SAMM50-205ENST00000493621 ODF3Q96PU9 254 aa8.44□□□□□ -1.06
SAMM50-205ENST00000493621 GSN-AS1Q9NRJ2 163 aa8.44□□□□□ -1.06
SAMM50-205ENST00000493621 TNFRSF18Q9Y5U5 241 aa8.44□□□□□ -1.06
SAMM50-205ENST00000493621 FAT1Q14517 4588 aa8.43□□□□□ -1.06
SAMM50-205ENST00000493621 TRGV1A0A0A0MS02 117 aa8.43□□□□□ -1.06
SAMM50-205ENST00000493621 NXPH4O95158 308 aa8.43□□□□□ -1.06
SAMM50-205ENST00000493621 ARL16Q0P5N6 197 aa8.43□□□□□ -1.06
SAMM50-205ENST00000493621 CDPF1Q6NVV7 123 aa8.43□□□□□ -1.06
SAMM50-205ENST00000493621 C11orf72Q8NBR9 251 aa8.43□□□□□ -1.06
SAMM50-205ENST00000493621 FRZBQ92765 325 aa8.43□□□□□ -1.06
SAMM50-205ENST00000493621 SAT2Q96F10 170 aaPredicted RBP8.43□□□□□ -1.06
SAMM50-205ENST00000493621 MGST2Q99735 147 aa8.43□□□□□ -1.06
SAMM50-205ENST00000493621 FUT9Q9Y231 359 aa8.43□□□□□ -1.06
SAMM50-205ENST00000493621 C7orf71A4D174 169 aa8.42□□□□□ -1.06
SAMM50-205ENST00000493621 TSC22D2O75157 780 aa8.42□□□□□ -1.06
SAMM50-205ENST00000493621 SLC25A5P05141 298 aaKnown RBP8.42□□□□□ -1.06
SAMM50-205ENST00000493621 DNAH10OSP0CZ25 163 aa8.42□□□□□ -1.06
SAMM50-205ENST00000493621 EIF4E3Q8N5X7 224 aaKnown RBP8.42□□□□□ -1.06
SAMM50-205ENST00000493621 C18orf15Q96N68 181 aa8.42□□□□□ -1.06
SAMM50-205ENST00000493621 FLVCR2Q9UPI3 526 aa8.42□□□□□ -1.06
SAMM50-205ENST00000493621 ICOSQ9Y6W8 199 aa8.42□□□□□ -1.06
SAMM50-205ENST00000493621 SRRM2Q9UQ35 2752 aaKnown RBP8.41□□□□□ -1.06
SAMM50-205ENST00000493621 TRAV5A0A0B4J249 113 aa8.41□□□□□ -1.06
SAMM50-205ENST00000493621 PAX4O43316 350 aa8.41□□□□□ -1.06
SAMM50-205ENST00000493621 PRAF2O60831 178 aa8.41□□□□□ -1.06
SAMM50-205ENST00000493621 ZNF324O75467 553 aaPredicted RBP8.41□□□□□ -1.06
SAMM50-205ENST00000493621 IFNA5P01569 189 aa8.41□□□□□ -1.06
SAMM50-205ENST00000493621 TAS2R30P59541 319 aa8.41□□□□□ -1.06
SAMM50-205ENST00000493621 KRTAP10-1P60331 282 aa8.41□□□□□ -1.06
SAMM50-205ENST00000493621 ERCC8Q13216 396 aa8.41□□□□□ -1.06
SAMM50-205ENST00000493621 BTN1A1Q13410 526 aa8.41□□□□□ -1.06
SAMM50-205ENST00000493621 GUK1Q16774 197 aa8.41□□□□□ -1.06
SAMM50-205ENST00000493621 IAH1Q2TAA2 248 aaPredicted RBP8.41□□□□□ -1.06
SAMM50-205ENST00000493621 C4orf46Q504U0 113 aa8.41□□□□□ -1.06
SAMM50-205ENST00000493621 GGACTQ9BVM4 153 aa8.41□□□□□ -1.06
SAMM50-205ENST00000493621 DNAJC4Q9NNZ3 241 aa8.41□□□□□ -1.06
SAMM50-205ENST00000493621 GSKIPQ9P0R6 139 aa8.41□□□□□ -1.06
SAMM50-205ENST00000493621 RCL1Q9Y2P8 373 aaKnown RBP8.41□□□□□ -1.06
SAMM50-205ENST00000493621 KLF12Q9Y4X4 402 aa8.41□□□□□ -1.06
SAMM50-205ENST00000493621 A0A087WTM6 91 aa8.4□□□□□ -1.06
SAMM50-205ENST00000493621 SPINK4O60575 86 aa8.4□□□□□ -1.06
SAMM50-205ENST00000493621 IGHV3-53P01767 116 aa8.4□□□□□ -1.06
SAMM50-205ENST00000493621 OR4E1P0C645 316 aa8.4□□□□□ -1.06
SAMM50-205ENST00000493621 CAMLGP49069 296 aa8.4□□□□□ -1.06
SAMM50-205ENST00000493621 NFE4Q86UQ8 179 aa8.4□□□□□ -1.06
SAMM50-205ENST00000493621 LINC00469Q8N7U9 141 aa8.4□□□□□ -1.06
SAMM50-205ENST00000493621 ASB13Q8WXK3 278 aa8.4□□□□□ -1.06
SAMM50-205ENST00000493621 FLG2Q5D862 2391 aaPredicted RBP8.39□□□□□ -1.07
SAMM50-205ENST00000493621 M0R3E3 92 aa8.39□□□□□ -1.07
SAMM50-205ENST00000493621 NDUFB6O95139 128 aa8.39□□□□□ -1.07
SAMM50-205ENST00000493621 SMR3BP02814 79 aaPredicted RBP8.39□□□□□ -1.07
SAMM50-205ENST00000493621 S100A6P06703 90 aa8.39□□□□□ -1.07
SAMM50-205ENST00000493621 RNASE4P34096 147 aaKnown RBP8.39□□□□□ -1.07
SAMM50-205ENST00000493621 TCL1AP56279 114 aa8.39□□□□□ -1.07
SAMM50-205ENST00000493621 ANXA2RQ3ZCQ2 193 aa8.39□□□□□ -1.07
SAMM50-205ENST00000493621 MIC13Q5XKP0 118 aa8.39□□□□□ -1.07
SAMM50-205ENST00000493621 LYPD5Q6UWN5 251 aa8.39□□□□□ -1.07
SAMM50-205ENST00000493621 Q6ZRG5 221 aa8.39□□□□□ -1.07
SAMM50-205ENST00000493621 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.39□□□□□ -1.07
SAMM50-205ENST00000493621 CLRN3Q8NCR9 226 aa8.39□□□□□ -1.07
SAMM50-205ENST00000493621 LINC00467Q9BRT7 94 aa8.39□□□□□ -1.07
SAMM50-205ENST00000493621 MRPL16Q9NX20 251 aaKnown RBP8.39□□□□□ -1.07
SAMM50-205ENST00000493621 MYCBP2O75592 4640 aa8.39□□□□□ -1.07
SAMM50-205ENST00000493621 KLLNB2CW77 178 aa8.38□□□□□ -1.07
SAMM50-205ENST00000493621 L7N2F9 121 aa8.38□□□□□ -1.07
SAMM50-205ENST00000493621 MPDU1O75352 247 aa8.38□□□□□ -1.07
SAMM50-205ENST00000493621 MBPP02686 304 aaPredicted RBP8.38□□□□□ -1.07
SAMM50-205ENST00000493621 CRYBA4P53673 196 aa8.38□□□□□ -1.07
SAMM50-205ENST00000493621 VAMP2P63027 116 aa8.38□□□□□ -1.07
SAMM50-205ENST00000493621 RAB31Q13636 194 aa8.38□□□□□ -1.07
SAMM50-205ENST00000493621 ICAM4Q14773 271 aa8.38□□□□□ -1.07
SAMM50-205ENST00000493621 OR1L4Q8NGR5 311 aa8.38□□□□□ -1.07
SAMM50-205ENST00000493621 MRPL53Q96EL3 112 aaKnown RBP8.38□□□□□ -1.07
SAMM50-205ENST00000493621 FAM19A4Q96LR4 140 aa8.38□□□□□ -1.07
SAMM50-205ENST00000493621 C8orf49Q96NF6 230 aa8.38□□□□□ -1.07
SAMM50-205ENST00000493621 AGPAT4-IT1Q9H0P7 198 aa8.38□□□□□ -1.07
SAMM50-205ENST00000493621 MDFICQ9P1T7 246 aa8.38□□□□□ -1.07
SAMM50-205ENST00000493621 PRO0255Q9UI72 69 aa8.38□□□□□ -1.07
SAMM50-205ENST00000493621 TP53TG3Q9ULZ0 132 aa8.38□□□□□ -1.07
SAMM50-205ENST00000493621 TRBV19A0A075B6N1 114 aa8.37□□□□□ -1.07
SAMM50-205ENST00000493621 TRAV9-2A0A087WT02 112 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms