RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 SUN5Q8TC36 379 aa10.1□□□□□ -0.79
CCM2-217ENST00000492883 TMED6Q8WW62 240 aa10.1□□□□□ -0.79
CCM2-217ENST00000492883 ODF3Q96PU9 254 aa10.1□□□□□ -0.79
CCM2-217ENST00000492883 VGLL1Q99990 258 aa10.1□□□□□ -0.79
CCM2-217ENST00000492883 MAP1LC3BQ9GZQ8 125 aa10.1□□□□□ -0.79
CCM2-217ENST00000492883 RPH3ALQ9UNE2 315 aa10.1□□□□□ -0.79
CCM2-217ENST00000492883 TGP01266 2768 aa10.1□□□□□ -0.79
CCM2-217ENST00000492883 SLC25A5P05141 298 aaKnown RBP10.09□□□□□ -0.79
CCM2-217ENST00000492883 FHITP49789 147 aa10.09□□□□□ -0.79
CCM2-217ENST00000492883 KIR3DS1Q14943 382 aa10.09□□□□□ -0.79
CCM2-217ENST00000492883 RRN3P1Q2M238 152 aa10.09□□□□□ -0.79
CCM2-217ENST00000492883 C11orf45Q8TAV5 145 aa10.09□□□□□ -0.79
CCM2-217ENST00000492883 FAM213BQ8TBF2 198 aa10.09□□□□□ -0.79
CCM2-217ENST00000492883 TMPRSS5Q9H3S3 457 aa10.09□□□□□ -0.79
CCM2-217ENST00000492883 PLA2G2EQ9NZK7 142 aa10.09□□□□□ -0.79
CCM2-217ENST00000492883 RBAKDNA6NC62 111 aa10.08□□□□□ -0.8
CCM2-217ENST00000492883 HTN1P15515 57 aa10.08□□□□□ -0.8
CCM2-217ENST00000492883 ZNF138P52744 262 aa10.08□□□□□ -0.8
CCM2-217ENST00000492883 EMP1P54849 157 aa10.08□□□□□ -0.8
CCM2-217ENST00000492883 SUMO1P63165 101 aaKnown RBP10.08□□□□□ -0.8
CCM2-217ENST00000492883 SLC51BQ86UW2 128 aa10.08□□□□□ -0.8
CCM2-217ENST00000492883 TMEM256Q8N2U0 113 aa10.08□□□□□ -0.8
CCM2-217ENST00000492883 ARL6IP6Q8N6S5 226 aa10.08□□□□□ -0.8
CCM2-217ENST00000492883 ZNF492Q9P255 531 aa10.08□□□□□ -0.8
CCM2-217ENST00000492883 AGRNO00468 2067 aa10.07□□□□□ -0.8
CCM2-217ENST00000492883 TMEM189A5PLL7 270 aa10.07□□□□□ -0.8
CCM2-217ENST00000492883 CXorf65A6NEN9 183 aa10.07□□□□□ -0.8
CCM2-217ENST00000492883 ZNF705GA8MUZ8 300 aaPredicted RBP10.07□□□□□ -0.8
CCM2-217ENST00000492883 GPX1P07203 203 aa10.07□□□□□ -0.8
CCM2-217ENST00000492883 UBE2G2P60604 165 aa10.07□□□□□ -0.8
CCM2-217ENST00000492883 PMS2P11Q13670 270 aa10.07□□□□□ -0.8
CCM2-217ENST00000492883 CASC10Q5T4H9 136 aa10.07□□□□□ -0.8
CCM2-217ENST00000492883 GFI1BQ5VTD9 330 aa10.07□□□□□ -0.8
CCM2-217ENST00000492883 DPPA3Q6W0C5 159 aa10.07□□□□□ -0.8
CCM2-217ENST00000492883 GOLT1AQ6ZVE7 132 aa10.07□□□□□ -0.8
CCM2-217ENST00000492883 C9orf62Q8N4C0 152 aa10.07□□□□□ -0.8
CCM2-217ENST00000492883 SFT2D1Q8WV19 159 aa10.07□□□□□ -0.8
CCM2-217ENST00000492883 C20orf144Q9BQM9 153 aa10.07□□□□□ -0.8
CCM2-217ENST00000492883 TRAV12-3A0A0B4J271 114 aa10.06□□□□□ -0.8
CCM2-217ENST00000492883 LOC102723971A0A1B0GUV8 181 aa10.06□□□□□ -0.8
CCM2-217ENST00000492883 A0A1W2PRE2 83 aa10.06□□□□□ -0.8
CCM2-217ENST00000492883 H7BYZ3 331 aa10.06□□□□□ -0.8
CCM2-217ENST00000492883 PRM2P04554 102 aa10.06□□□□□ -0.8
CCM2-217ENST00000492883 RNASE4P34096 147 aaKnown RBP10.06□□□□□ -0.8
CCM2-217ENST00000492883 TAS2R60P59551 318 aa10.06□□□□□ -0.8
CCM2-217ENST00000492883 NANOS2P60321 138 aaKnown RBP10.06□□□□□ -0.8
CCM2-217ENST00000492883 GNG5P63218 68 aa10.06□□□□□ -0.8
CCM2-217ENST00000492883 C5orf17Q8NAS9 161 aa10.06□□□□□ -0.8
CCM2-217ENST00000492883 Q8TAT8 98 aa10.06□□□□□ -0.8
CCM2-217ENST00000492883 FAM19A4Q96LR4 140 aa10.06□□□□□ -0.8
CCM2-217ENST00000492883 NIPSNAP3BQ9BS92 247 aa10.06□□□□□ -0.8
CCM2-217ENST00000492883 C7orf71A4D174 169 aa10.05□□□□□ -0.8
CCM2-217ENST00000492883 KLLNB2CW77 178 aa10.05□□□□□ -0.8
CCM2-217ENST00000492883 K7EQM0 130 aa10.05□□□□□ -0.8
CCM2-217ENST00000492883 IFNA7P01567 189 aa10.05□□□□□ -0.8
CCM2-217ENST00000492883 NMBP08949 121 aa10.05□□□□□ -0.8
CCM2-217ENST00000492883 H2AFB1P0C5Y9 115 aa10.05□□□□□ -0.8
CCM2-217ENST00000492883 CRISP2P16562 243 aa10.05□□□□□ -0.8
CCM2-217ENST00000492883 RAB5CP51148 216 aa10.05□□□□□ -0.8
CCM2-217ENST00000492883 MBD3L1Q8WWY6 194 aa10.05□□□□□ -0.8
CCM2-217ENST00000492883 EPDR1Q9UM22 224 aa10.05□□□□□ -0.8
CCM2-217ENST00000492883 YTHDF2Q9Y5A9 579 aaKnown RBP10.05□□□□□ -0.8
CCM2-217ENST00000492883 TRBV7-9A0A0J9YWB2 115 aa10.04□□□□□ -0.8
CCM2-217ENST00000492883 A0A1B0GV50 99 aa10.04□□□□□ -0.8
CCM2-217ENST00000492883 SERTM2A0A1B0GWG4 89 aa10.04□□□□□ -0.8
CCM2-217ENST00000492883 GGTLC3B5MD39 225 aa10.04□□□□□ -0.8
CCM2-217ENST00000492883 TCRAP04437 139 aa10.04□□□□□ -0.8
CCM2-217ENST00000492883 SPART-AS1P0CW21 52 aa10.04□□□□□ -0.8
CCM2-217ENST00000492883 AZU1P20160 251 aa10.04□□□□□ -0.8
CCM2-217ENST00000492883 NKX2-5P52952 324 aaPredicted RBP10.04□□□□□ -0.8
CCM2-217ENST00000492883 CCDC28AQ8IWP9 274 aa10.04□□□□□ -0.8
CCM2-217ENST00000492883 ZFAND2AQ8N6M9 145 aa10.04□□□□□ -0.8
CCM2-217ENST00000492883 NKX6-2Q9C056 277 aaPredicted RBP10.04□□□□□ -0.8
CCM2-217ENST00000492883 LENEPQ9Y5L5 61 aa10.04□□□□□ -0.8
CCM2-217ENST00000492883 COL7A1Q02388 2944 aa10.04□□□□□ -0.8
CCM2-217ENST00000492883 TRAV8-1A0A0A6YYK1 113 aa10.03□□□□□ -0.8
CCM2-217ENST00000492883 FAM74A7A6NL05 159 aa10.03□□□□□ -0.8
CCM2-217ENST00000492883 BTN1A1Q13410 526 aa10.03□□□□□ -0.8
CCM2-217ENST00000492883 CST9LP1Q5W188 147 aa10.03□□□□□ -0.8
CCM2-217ENST00000492883 SGK494Q96LW2 274 aa10.03□□□□□ -0.8
CCM2-217ENST00000492883 CELA1Q9UNI1 258 aa10.03□□□□□ -0.8
CCM2-217ENST00000492883 TEX46H3BTG2 121 aa10.02□□□□□ -0.81
CCM2-217ENST00000492883 SULT1A2P50226 295 aa10.02□□□□□ -0.81
CCM2-217ENST00000492883 FAM222AQ5U5X8 452 aa10.02□□□□□ -0.81
CCM2-217ENST00000492883 ZNF767PQ75MW2 155 aa10.02□□□□□ -0.81
CCM2-217ENST00000492883 CYB561D1Q8N8Q1 229 aa10.02□□□□□ -0.81
CCM2-217ENST00000492883 PHLDA1Q8WV24 401 aaPredicted RBP10.02□□□□□ -0.81
CCM2-217ENST00000492883 C16orf74Q96GX8 76 aa10.02□□□□□ -0.81
CCM2-217ENST00000492883 PYGO2Q9BRQ0 406 aa10.02□□□□□ -0.81
CCM2-217ENST00000492883 ATG101Q9BSB4 218 aa10.02□□□□□ -0.81
CCM2-217ENST00000492883 NBEAL2Q6ZNJ1 2754 aa10.02□□□□□ -0.81
CCM2-217ENST00000492883 TEX48A0A1B0GUV7 120 aa10.01□□□□□ -0.81
CCM2-217ENST00000492883 NUPR2A6NF83 97 aa10.01□□□□□ -0.81
CCM2-217ENST00000492883 PAGE4O60829 102 aa10.01□□□□□ -0.81
CCM2-217ENST00000492883 ZNF324O75467 553 aaPredicted RBP10.01□□□□□ -0.81
CCM2-217ENST00000492883 PRR9Q5T870 116 aa10.01□□□□□ -0.81
CCM2-217ENST00000492883 CEMP1Q6PRD7 247 aaPredicted RBP10.01□□□□□ -0.81
CCM2-217ENST00000492883 ZNF493Q6ZR52 646 aa10.01□□□□□ -0.81
CCM2-217ENST00000492883 NDFIP1Q9BT67 221 aa10.01□□□□□ -0.81
CCM2-217ENST00000492883 TREM1Q9NP99 234 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms