RNA–Protein interactions for RNA: ENST00000492796.5

CDC42SE1-206, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 1,174 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-206ENST00000492796 SH3BGRL3Q9H299 93 aa7.63□□□□□ -1.19
CDC42SE1-206ENST00000492796 DKK2Q9UBU2 259 aa7.63□□□□□ -1.19
CDC42SE1-206ENST00000492796 YTHDF2Q9Y5A9 579 aaKnown RBP7.63□□□□□ -1.19
CDC42SE1-206ENST00000492796 IGKV2-40A0A087WW87 121 aaPredicted RBP7.62□□□□□ -1.19
CDC42SE1-206ENST00000492796 TRBV7-9A0A0J9YWB2 115 aa7.62□□□□□ -1.19
CDC42SE1-206ENST00000492796 LYRM9A8MSI8 78 aa7.62□□□□□ -1.19
CDC42SE1-206ENST00000492796 HMSDA8MTL9 139 aa7.62□□□□□ -1.19
CDC42SE1-206ENST00000492796 ZNF705GA8MUZ8 300 aaPredicted RBP7.62□□□□□ -1.19
CDC42SE1-206ENST00000492796 SMLR1H3BR10 107 aa7.62□□□□□ -1.19
CDC42SE1-206ENST00000492796 IGKV2D-40P01614 121 aaPredicted RBP7.62□□□□□ -1.19
CDC42SE1-206ENST00000492796 NMBP08949 121 aa7.62□□□□□ -1.19
CDC42SE1-206ENST00000492796 ARL14EPLP0DKL9 152 aa7.62□□□□□ -1.19
CDC42SE1-206ENST00000492796 ERCC8Q13216 396 aa7.62□□□□□ -1.19
CDC42SE1-206ENST00000492796 FAM222AQ5U5X8 452 aa7.62□□□□□ -1.19
CDC42SE1-206ENST00000492796 TMEM263Q8WUH6 116 aaKnown RBP7.62□□□□□ -1.19
CDC42SE1-206ENST00000492796 LINC00476Q8WZB0 136 aa7.62□□□□□ -1.19
CDC42SE1-206ENST00000492796 C16orf74Q96GX8 76 aa7.62□□□□□ -1.19
CDC42SE1-206ENST00000492796 NIPSNAP3BQ9BS92 247 aa7.62□□□□□ -1.19
CDC42SE1-206ENST00000492796 ACTR3CQ9C0K3 210 aaPredicted RBP7.62□□□□□ -1.19
CDC42SE1-206ENST00000492796 AGPAT4-IT1Q9H0P7 198 aa7.62□□□□□ -1.19
CDC42SE1-206ENST00000492796 OTORQ9NRC9 128 aa7.62□□□□□ -1.19
CDC42SE1-206ENST00000492796 ALMS1Q8TCU4 4167 aa7.62□□□□□ -1.19
CDC42SE1-206ENST00000492796 KLLNB2CW77 178 aa7.61□□□□□ -1.19
CDC42SE1-206ENST00000492796 EIF3GO75821 320 aaKnown RBP eCLIP7.61□□□□□ -1.19
CDC42SE1-206ENST00000492796 CRISP2P16562 243 aa7.61□□□□□ -1.19
CDC42SE1-206ENST00000492796 KIR3DS1Q14943 382 aa7.61□□□□□ -1.19
CDC42SE1-206ENST00000492796 ZNF493Q6ZR52 646 aa7.61□□□□□ -1.19
CDC42SE1-206ENST00000492796 KCNRGQ8N5I3 272 aa7.61□□□□□ -1.19
CDC42SE1-206ENST00000492796 ARL6IP6Q8N6S5 226 aa7.61□□□□□ -1.19
CDC42SE1-206ENST00000492796 CMTM2Q8TAZ6 248 aa7.61□□□□□ -1.19
CDC42SE1-206ENST00000492796 RAB24Q969Q5 203 aa7.61□□□□□ -1.19
CDC42SE1-206ENST00000492796 VGLL1Q99990 258 aa7.61□□□□□ -1.19
CDC42SE1-206ENST00000492796 ARPC5LQ9BPX5 153 aa7.61□□□□□ -1.19
CDC42SE1-206ENST00000492796 ZNF492Q9P255 531 aa7.61□□□□□ -1.19
CDC42SE1-206ENST00000492796 BIRC6Q9NR09 4857 aa7.61□□□□□ -1.19
CDC42SE1-206ENST00000492796 DEFB131BA0A096LNP1 70 aa7.6□□□□□ -1.19
CDC42SE1-206ENST00000492796 TRAV12-3A0A0B4J271 114 aa7.6□□□□□ -1.19
CDC42SE1-206ENST00000492796 A0A0D9SG52 128 aa7.6□□□□□ -1.19
CDC42SE1-206ENST00000492796 PLAC8L1A1L4L8 177 aa7.6□□□□□ -1.19
CDC42SE1-206ENST00000492796 C7orf71A4D174 169 aa7.6□□□□□ -1.19
CDC42SE1-206ENST00000492796 DIRC3C9JPN6 131 aa7.6□□□□□ -1.19
CDC42SE1-206ENST00000492796 J3KRW8 73 aa7.6□□□□□ -1.19
CDC42SE1-206ENST00000492796 HMGB3O15347 200 aaKnown RBP7.6□□□□□ -1.19
CDC42SE1-206ENST00000492796 CXorf1O96002 111 aa7.6□□□□□ -1.19
CDC42SE1-206ENST00000492796 ZNF138P52744 262 aa7.6□□□□□ -1.19
CDC42SE1-206ENST00000492796 AKR1C8PQ5T2L2 129 aa7.6□□□□□ -1.19
CDC42SE1-206ENST00000492796 ZNF767PQ75MW2 155 aa7.6□□□□□ -1.19
CDC42SE1-206ENST00000492796 CCDC28AQ8IWP9 274 aa7.6□□□□□ -1.19
CDC42SE1-206ENST00000492796 SUN5Q8TC36 379 aa7.6□□□□□ -1.19
CDC42SE1-206ENST00000492796 RNASE8Q8TDE3 154 aaKnown RBP7.6□□□□□ -1.19
CDC42SE1-206ENST00000492796 TMED6Q8WW62 240 aa7.6□□□□□ -1.19
CDC42SE1-206ENST00000492796 PYGO2Q9BRQ0 406 aa7.6□□□□□ -1.19
CDC42SE1-206ENST00000492796 CYTL1Q9NRR1 136 aa7.6□□□□□ -1.19
CDC42SE1-206ENST00000492796 TMEM167BQ9NRX6 74 aa7.6□□□□□ -1.19
CDC42SE1-206ENST00000492796 LENEPQ9Y5L5 61 aa7.6□□□□□ -1.19
CDC42SE1-206ENST00000492796 EPPK1P58107 5090 aaKnown RBP7.6□□□□□ -1.19
CDC42SE1-206ENST00000492796 CTXND1A0A1B0GTU2 59 aa7.59□□□□□ -1.19
CDC42SE1-206ENST00000492796 PGPA6NDG6 321 aa7.59□□□□□ -1.19
CDC42SE1-206ENST00000492796 IGLL5B9A064 214 aa7.59□□□□□ -1.19
CDC42SE1-206ENST00000492796 PRM2P04554 102 aa7.59□□□□□ -1.19
CDC42SE1-206ENST00000492796 GPX1P07203 203 aa7.59□□□□□ -1.19
CDC42SE1-206ENST00000492796 HTN1P15515 57 aa7.59□□□□□ -1.19
CDC42SE1-206ENST00000492796 AZU1P20160 251 aa7.59□□□□□ -1.19
CDC42SE1-206ENST00000492796 GCHFRP30047 84 aa7.59□□□□□ -1.19
CDC42SE1-206ENST00000492796 DAD1P61803 113 aa7.59□□□□□ -1.19
CDC42SE1-206ENST00000492796 ZFAND2AQ8N6M9 145 aa7.59□□□□□ -1.19
CDC42SE1-206ENST00000492796 OR11H4Q8NGC9 324 aa7.59□□□□□ -1.19
CDC42SE1-206ENST00000492796 ST6GAL2Q96JF0 529 aa7.59□□□□□ -1.19
CDC42SE1-206ENST00000492796 HYLS1Q96M11 299 aa7.59□□□□□ -1.19
CDC42SE1-206ENST00000492796 LINC00467Q9BRT7 94 aa7.59□□□□□ -1.19
CDC42SE1-206ENST00000492796 TIMM8BQ9Y5J9 83 aaPredicted RBP7.59□□□□□ -1.19
CDC42SE1-206ENST00000492796 PLECQ15149 4684 aaKnown RBP7.59□□□□□ -1.19
CDC42SE1-206ENST00000492796 IGHV4-4A0A075B6R2 117 aa7.58□□□□□ -1.2
CDC42SE1-206ENST00000492796 SERTM2A0A1B0GWG4 89 aa7.58□□□□□ -1.2
CDC42SE1-206ENST00000492796 KANTRA0A1W2PQU2 76 aa7.58□□□□□ -1.2
CDC42SE1-206ENST00000492796 BCL2L11O43521 198 aa7.58□□□□□ -1.2
CDC42SE1-206ENST00000492796 LY6G6CO95867 125 aa7.58□□□□□ -1.2
CDC42SE1-206ENST00000492796 BTN1A1Q13410 526 aa7.58□□□□□ -1.2
CDC42SE1-206ENST00000492796 LGALS9CQ6DKI2 356 aa7.58□□□□□ -1.2
CDC42SE1-206ENST00000492796 Q6ZNX1 250 aa7.58□□□□□ -1.2
CDC42SE1-206ENST00000492796 C5orf17Q8NAS9 161 aa7.58□□□□□ -1.2
CDC42SE1-206ENST00000492796 ZNF680Q8NEM1 530 aa7.58□□□□□ -1.2
CDC42SE1-206ENST00000492796 Q8TAT8 98 aa7.58□□□□□ -1.2
CDC42SE1-206ENST00000492796 FAM210BQ96KR6 192 aa7.58□□□□□ -1.2
CDC42SE1-206ENST00000492796 APLNQ9ULZ1 77 aa7.58□□□□□ -1.2
CDC42SE1-206ENST00000492796 RPH3ALQ9UNE2 315 aa7.58□□□□□ -1.2
CDC42SE1-206ENST00000492796 SNURFLB1AK76 121 aa7.57□□□□□ -1.2
CDC42SE1-206ENST00000492796 ZNF324O75467 553 aaPredicted RBP7.57□□□□□ -1.2
CDC42SE1-206ENST00000492796 SEC11BP0C7V7 166 aa7.57□□□□□ -1.2
CDC42SE1-206ENST00000492796 RNASE4P34096 147 aaKnown RBP7.57□□□□□ -1.2
CDC42SE1-206ENST00000492796 EIF5AP63241 154 aaKnown RBP7.57□□□□□ -1.2
CDC42SE1-206ENST00000492796 CD300CQ08708 224 aa7.57□□□□□ -1.2
CDC42SE1-206ENST00000492796 ZNF726P1Q15940 193 aa7.57□□□□□ -1.2
CDC42SE1-206ENST00000492796 PRR9Q5T870 116 aa7.57□□□□□ -1.2
CDC42SE1-206ENST00000492796 GOLT1AQ6ZVE7 132 aa7.57□□□□□ -1.2
CDC42SE1-206ENST00000492796 SSX7Q7RTT5 188 aa7.57□□□□□ -1.2
CDC42SE1-206ENST00000492796 TCTE3Q8IZS6 198 aa7.57□□□□□ -1.2
CDC42SE1-206ENST00000492796 EIF4E3Q8N5X7 224 aaKnown RBP7.57□□□□□ -1.2
CDC42SE1-206ENST00000492796 NDUFAF3Q9BU61 184 aa7.57□□□□□ -1.2
CDC42SE1-206ENST00000492796 DNAH1Q9P2D7 4330 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 125.5 ms