RNA–Protein interactions for RNA: ENST00000492512.1

GPNMB-213, Transcript of glycoprotein nmb, humanhuman

TSL 3

Gene GPNMB, Length 447 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-213ENST00000492512 ZNF546Q86UE3 836 aa9.24□□□□□ -0.93
GPNMB-213ENST00000492512 MGAT4CQ9UBM8 478 aa9.24□□□□□ -0.93
GPNMB-213ENST00000492512 FNDC10F2Z333 226 aa9.23□□□□□ -0.93
GPNMB-213ENST00000492512 H3BQ15 152 aa9.23□□□□□ -0.93
GPNMB-213ENST00000492512 CCNKO75909 580 aa9.23□□□□□ -0.93
GPNMB-213ENST00000492512 CRYGDP07320 174 aa9.23□□□□□ -0.93
GPNMB-213ENST00000492512 IGLC2P0DOY2 106 aa9.23□□□□□ -0.93
GPNMB-213ENST00000492512 SRIP30626 198 aa9.23□□□□□ -0.93
GPNMB-213ENST00000492512 FAUP35544 74 aaKnown RBP9.23□□□□□ -0.93
GPNMB-213ENST00000492512 ID3Q02535 119 aa9.23□□□□□ -0.93
GPNMB-213ENST00000492512 C4orf46Q504U0 113 aa9.23□□□□□ -0.93
GPNMB-213ENST00000492512 C10orf126Q8N4M7 172 aa9.23□□□□□ -0.93
GPNMB-213ENST00000492512 SAT2Q96F10 170 aaPredicted RBP9.23□□□□□ -0.93
GPNMB-213ENST00000492512 VGLL1Q99990 258 aa9.23□□□□□ -0.93
GPNMB-213ENST00000492512 MRPL16Q9NX20 251 aaKnown RBP9.23□□□□□ -0.93
GPNMB-213ENST00000492512 UBR4Q5T4S7 5183 aa9.22□□□□□ -0.93
GPNMB-213ENST00000492512 E5RGE8 158 aa9.22□□□□□ -0.93
GPNMB-213ENST00000492512 SSSCA1O60232 199 aa9.22□□□□□ -0.93
GPNMB-213ENST00000492512 SFT2D2O95562 160 aa9.22□□□□□ -0.93
GPNMB-213ENST00000492512 METTL15P1P0C7V9 234 aa9.22□□□□□ -0.93
GPNMB-213ENST00000492512 RNASE4P34096 147 aaKnown RBP9.22□□□□□ -0.93
GPNMB-213ENST00000492512 BTN1A1Q13410 526 aa9.22□□□□□ -0.93
GPNMB-213ENST00000492512 PPP1R1AQ13522 171 aa9.22□□□□□ -0.93
GPNMB-213ENST00000492512 FHL2Q14192 279 aa9.22□□□□□ -0.93
GPNMB-213ENST00000492512 OPCMLQ14982 345 aa9.22□□□□□ -0.93
GPNMB-213ENST00000492512 GUK1Q16774 197 aa9.22□□□□□ -0.93
GPNMB-213ENST00000492512 IBA57Q5T440 356 aaKnown RBP9.22□□□□□ -0.93
GPNMB-213ENST00000492512 MORN5Q5VZ52 161 aa9.22□□□□□ -0.93
GPNMB-213ENST00000492512 OR10P1Q8NGE3 313 aa9.22□□□□□ -0.93
GPNMB-213ENST00000492512 DEFB104AQ8WTQ1 72 aa9.22□□□□□ -0.93
GPNMB-213ENST00000492512 CHAC2Q8WUX2 184 aa9.22□□□□□ -0.93
GPNMB-213ENST00000492512 MRPL32Q9BYC8 188 aaKnown RBP9.22□□□□□ -0.93
GPNMB-213ENST00000492512 FAM30AQ9NZY2 134 aa9.22□□□□□ -0.93
GPNMB-213ENST00000492512 TRGV4A0A0C4DH28 118 aa9.21□□□□□ -0.94
GPNMB-213ENST00000492512 LRCOL1A6NCL2 159 aa9.21□□□□□ -0.94
GPNMB-213ENST00000492512 KLLNB2CW77 178 aa9.21□□□□□ -0.94
GPNMB-213ENST00000492512 K7EQD1 137 aa9.21□□□□□ -0.94
GPNMB-213ENST00000492512 AGPAT2O15120 278 aa9.21□□□□□ -0.94
GPNMB-213ENST00000492512 MPDU1O75352 247 aa9.21□□□□□ -0.94
GPNMB-213ENST00000492512 CD300CQ08708 224 aa9.21□□□□□ -0.94
GPNMB-213ENST00000492512 ERCC8Q13216 396 aa9.21□□□□□ -0.94
GPNMB-213ENST00000492512 C10orf113Q5VZT2 155 aa9.21□□□□□ -0.94
GPNMB-213ENST00000492512 NRARPQ7Z6K4 114 aa9.21□□□□□ -0.94
GPNMB-213ENST00000492512 ENKURQ8TC29 256 aa9.21□□□□□ -0.94
GPNMB-213ENST00000492512 PCNPQ8WW12 178 aaKnown RBP9.21□□□□□ -0.94
GPNMB-213ENST00000492512 TMEM37Q8WXS4 190 aa9.21□□□□□ -0.94
GPNMB-213ENST00000492512 SMIM8Q96KF7 97 aa9.21□□□□□ -0.94
GPNMB-213ENST00000492512 HMCN2Q8NDA2 5059 aa9.2□□□□□ -0.94
GPNMB-213ENST00000492512 CENPXA8MT69 81 aa9.2□□□□□ -0.94
GPNMB-213ENST00000492512 RGS13O14921 159 aa9.2□□□□□ -0.94
GPNMB-213ENST00000492512 PLA2G10O15496 165 aa9.2□□□□□ -0.94
GPNMB-213ENST00000492512 LYRM1O43325 122 aa9.2□□□□□ -0.94
GPNMB-213ENST00000492512 GPX1P07203 203 aa9.2□□□□□ -0.94
GPNMB-213ENST00000492512 OR4E1P0C645 316 aa9.2□□□□□ -0.94
GPNMB-213ENST00000492512 TMEM14EPQ6UXP3 125 aa9.2□□□□□ -0.94
GPNMB-213ENST00000492512 LINC00528Q8N1L1 170 aa9.2□□□□□ -0.94
GPNMB-213ENST00000492512 Q8N814 137 aa9.2□□□□□ -0.94
GPNMB-213ENST00000492512 ARPC5LQ9BPX5 153 aa9.2□□□□□ -0.94
GPNMB-213ENST00000492512 TP53TG3Q9ULZ0 132 aa9.2□□□□□ -0.94
GPNMB-213ENST00000492512 M0R3E3 92 aa9.19□□□□□ -0.94
GPNMB-213ENST00000492512 C1QBP02746 253 aa9.19□□□□□ -0.94
GPNMB-213ENST00000492512 GYPEP15421 78 aa9.19□□□□□ -0.94
GPNMB-213ENST00000492512 AP3S2P59780 193 aa9.19□□□□□ -0.94
GPNMB-213ENST00000492512 ZNF415Q09FC8 603 aa9.19□□□□□ -0.94
GPNMB-213ENST00000492512 TRIM63Q969Q1 353 aa9.19□□□□□ -0.94
GPNMB-213ENST00000492512 MRPL53Q96EL3 112 aaKnown RBP9.19□□□□□ -0.94
GPNMB-213ENST00000492512 LINC00477Q96M19 166 aa9.19□□□□□ -0.94
GPNMB-213ENST00000492512 SLC25A21Q9BQT8 299 aaPredicted RBP9.19□□□□□ -0.94
GPNMB-213ENST00000492512 DNAJC4Q9NNZ3 241 aa9.19□□□□□ -0.94
GPNMB-213ENST00000492512 IGHV1OR15-1A0A075B7D0 117 aa9.18□□□□□ -0.94
GPNMB-213ENST00000492512 TRAV5A0A0B4J249 113 aa9.18□□□□□ -0.94
GPNMB-213ENST00000492512 FAM240BA0A1B0GVZ2 78 aa9.18□□□□□ -0.94
GPNMB-213ENST00000492512 ZNF253O75346 499 aa9.18□□□□□ -0.94
GPNMB-213ENST00000492512 ORM1P02763 201 aa9.18□□□□□ -0.94
GPNMB-213ENST00000492512 DEDD2Q8WXF8 326 aa9.18□□□□□ -0.94
GPNMB-213ENST00000492512 FAM19A4Q96LR4 140 aa9.18□□□□□ -0.94
GPNMB-213ENST00000492512 MGST2Q99735 147 aa9.18□□□□□ -0.94
GPNMB-213ENST00000492512 TXNDC17Q9BRA2 123 aa9.18□□□□□ -0.94
GPNMB-213ENST00000492512 AGPAT4-IT1Q9H0P7 198 aa9.18□□□□□ -0.94
GPNMB-213ENST00000492512 RCL1Q9Y2P8 373 aaKnown RBP9.18□□□□□ -0.94
GPNMB-213ENST00000492512 DNAH8Q96JB1 4490 aa9.18□□□□□ -0.94
GPNMB-213ENST00000492512 NAP1L6A6NFF2 107 aa9.17□□□□□ -0.94
GPNMB-213ENST00000492512 SFTA3P0C7M3 94 aa9.17□□□□□ -0.94
GPNMB-213ENST00000492512 CRISP2P16562 243 aa9.17□□□□□ -0.94
GPNMB-213ENST00000492512 Q6ZRG5 221 aa9.17□□□□□ -0.94
GPNMB-213ENST00000492512 AKAP14Q86UN6 197 aa9.17□□□□□ -0.94
GPNMB-213ENST00000492512 TOMM5Q8N4H5 51 aa9.17□□□□□ -0.94
GPNMB-213ENST00000492512 GGACTQ9BVM4 153 aa9.17□□□□□ -0.94
GPNMB-213ENST00000492512 PLA2G2DQ9UNK4 145 aa9.17□□□□□ -0.94
GPNMB-213ENST00000492512 LRP1Q07954 4544 aaKnown RBP9.17□□□□□ -0.94
GPNMB-213ENST00000492512 IGHV3-38A0A0C4DH36 116 aa9.16□□□□□ -0.94
GPNMB-213ENST00000492512 SCGB1D2O95969 90 aa9.16□□□□□ -0.94
GPNMB-213ENST00000492512 NMBP08949 121 aa9.16□□□□□ -0.94
GPNMB-213ENST00000492512 CAMLGP49069 296 aa9.16□□□□□ -0.94
GPNMB-213ENST00000492512 ARL16Q0P5N6 197 aa9.16□□□□□ -0.94
GPNMB-213ENST00000492512 IQCF2Q8IXL9 164 aa9.16□□□□□ -0.94
GPNMB-213ENST00000492512 ZNF479Q96JC4 524 aa9.16□□□□□ -0.94
GPNMB-213ENST00000492512 Q9HAA7 133 aa9.16□□□□□ -0.94
GPNMB-213ENST00000492512 PRELID1Q9Y255 219 aa9.16□□□□□ -0.94
GPNMB-213ENST00000492512 TRBV19A0A075B6N1 114 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms