RNA–Protein interactions for RNA: ENST00000492506.1

HDAC3-213, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-213ENST00000492506 BMPR1BO00238 502 aa9.99□□□□□ -0.81
HDAC3-213ENST00000492506 OR2J3O76001 311 aa9.99□□□□□ -0.81
HDAC3-213ENST00000492506 OR7C1O76099 320 aaPredicted RBP9.99□□□□□ -0.81
HDAC3-213ENST00000492506 SRIP30626 198 aa9.99□□□□□ -0.81
HDAC3-213ENST00000492506 OPRK1P41145 380 aa9.99□□□□□ -0.81
HDAC3-213ENST00000492506 PLP1P60201 277 aa9.99□□□□□ -0.81
HDAC3-213ENST00000492506 ATP5L2Q7Z4Y8 100 aa9.99□□□□□ -0.81
HDAC3-213ENST00000492506 NPBQ8NG41 125 aa9.99□□□□□ -0.81
HDAC3-213ENST00000492506 OCC1Q8TAD7 63 aa9.99□□□□□ -0.81
HDAC3-213ENST00000492506 C18orf32Q8TCD1 76 aa9.99□□□□□ -0.81
HDAC3-213ENST00000492506 V9GYV3 84 aa9.99□□□□□ -0.81
HDAC3-213ENST00000492506 MUC21A0A0G2JKD1 596 aa9.98□□□□□ -0.81
HDAC3-213ENST00000492506 MUC21A0A140T8X8 626 aa9.98□□□□□ -0.81
HDAC3-213ENST00000492506 OR4C46A6NHA9 309 aa9.98□□□□□ -0.81
HDAC3-213ENST00000492506 NBR2O15453 112 aa9.98□□□□□ -0.81
HDAC3-213ENST00000492506 NDUFA3O95167 84 aa9.98□□□□□ -0.81
HDAC3-213ENST00000492506 IGHV3-11P01762 117 aa9.98□□□□□ -0.81
HDAC3-213ENST00000492506 OR9G9P0C7N8 305 aa9.98□□□□□ -0.81
HDAC3-213ENST00000492506 STAG3L2P0CL84 134 aa9.98□□□□□ -0.81
HDAC3-213ENST00000492506 EGR2P11161 476 aaPredicted RBP9.98□□□□□ -0.81
HDAC3-213ENST00000492506 NTF3P20783 257 aa9.98□□□□□ -0.81
HDAC3-213ENST00000492506 GPR183P32249 361 aa9.98□□□□□ -0.81
HDAC3-213ENST00000492506 ECSCRQ19T08 205 aa9.98□□□□□ -0.81
HDAC3-213ENST00000492506 TIGITQ495A1 244 aa9.98□□□□□ -0.81
HDAC3-213ENST00000492506 MUC21Q5SSG8 566 aa9.98□□□□□ -0.81
HDAC3-213ENST00000492506 OR2K2Q8NGT1 345 aa9.98□□□□□ -0.81
HDAC3-213ENST00000492506 FLYWCH2Q96CP2 140 aaKnown RBP9.98□□□□□ -0.81
HDAC3-213ENST00000492506 MRAP2Q96G30 205 aa9.98□□□□□ -0.81
HDAC3-213ENST00000492506 SCRT2Q9NQ03 307 aa9.98□□□□□ -0.81
HDAC3-213ENST00000492506 CCL28Q9NRJ3 127 aa9.98□□□□□ -0.81
HDAC3-213ENST00000492506 SPANXA1Q9NS26 97 aa9.98□□□□□ -0.81
HDAC3-213ENST00000492506 FOXA2Q9Y261 457 aaPredicted RBP9.98□□□□□ -0.81
HDAC3-213ENST00000492506 WDR83OSQ9Y284 106 aa9.98□□□□□ -0.81
HDAC3-213ENST00000492506 SERTM2A0A1B0GWG4 89 aa9.97□□□□□ -0.81
HDAC3-213ENST00000492506 SMIM27A0A1W2PRY6 76 aa9.97□□□□□ -0.81
HDAC3-213ENST00000492506 H0Y8G0 127 aa9.97□□□□□ -0.81
HDAC3-213ENST00000492506 SIVA1O15304 175 aa9.97□□□□□ -0.81
HDAC3-213ENST00000492506 HBZP02008 142 aa9.97□□□□□ -0.81
HDAC3-213ENST00000492506 ATP5G3P48201 142 aa9.97□□□□□ -0.81
HDAC3-213ENST00000492506 HSD52Q0P140 79 aa9.97□□□□□ -0.81
HDAC3-213ENST00000492506 CD300EQ496F6 205 aaPredicted RBP9.97□□□□□ -0.81
HDAC3-213ENST00000492506 Q56UQ5 140 aa9.97□□□□□ -0.81
HDAC3-213ENST00000492506 LINC00322Q6ZN03 302 aaPredicted RBP9.97□□□□□ -0.81
HDAC3-213ENST00000492506 Q6ZVH6 145 aa9.97□□□□□ -0.81
HDAC3-213ENST00000492506 BPIFA4PQ86YQ2 179 aa9.97□□□□□ -0.81
HDAC3-213ENST00000492506 OR8I2Q8N0Y5 310 aa9.97□□□□□ -0.81
HDAC3-213ENST00000492506 OR1L1Q8NH94 360 aa9.97□□□□□ -0.81
HDAC3-213ENST00000492506 NABP2Q9BQ15 211 aa9.97□□□□□ -0.81
HDAC3-213ENST00000492506 MRPL20Q9BYC9 149 aaKnown RBP9.97□□□□□ -0.81
HDAC3-213ENST00000492506 RETNQ9HD89 108 aa9.97□□□□□ -0.81
HDAC3-213ENST00000492506 TMEM167BQ9NRX6 74 aa9.97□□□□□ -0.81
HDAC3-213ENST00000492506 GNG12Q9UBI6 72 aa9.97□□□□□ -0.81
HDAC3-213ENST00000492506 TRAV8-6A0A0B4J262 113 aa9.96□□□□□ -0.82
HDAC3-213ENST00000492506 C2orf70A6NJV1 201 aa9.96□□□□□ -0.82
HDAC3-213ENST00000492506 F2Z2F3 143 aa9.96□□□□□ -0.82
HDAC3-213ENST00000492506 GNG4P50150 75 aa9.96□□□□□ -0.82
HDAC3-213ENST00000492506 TMEM30BQ3MIR4 351 aa9.96□□□□□ -0.82
HDAC3-213ENST00000492506 ZNF645Q8N7E2 425 aa9.96□□□□□ -0.82
HDAC3-213ENST00000492506 OR9G4Q8NGQ1 327 aa9.96□□□□□ -0.82
HDAC3-213ENST00000492506 IL17DQ8TAD2 202 aa9.96□□□□□ -0.82
HDAC3-213ENST00000492506 VSTM2AQ8TAG5 236 aa9.96□□□□□ -0.82
HDAC3-213ENST00000492506 GATAD1Q8WUU5 269 aa9.96□□□□□ -0.82
HDAC3-213ENST00000492506 C5orf30Q96GV9 206 aa9.96□□□□□ -0.82
HDAC3-213ENST00000492506 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.96□□□□□ -0.82
HDAC3-213ENST00000492506 SIGLEC8Q9NYZ4 499 aa9.96□□□□□ -0.82
HDAC3-213ENST00000492506 HSPB8Q9UJY1 196 aa9.96□□□□□ -0.82
HDAC3-213ENST00000492506 A0A0G2JRQ6 117 aa9.95□□□□□ -0.82
HDAC3-213ENST00000492506 OR11H12B2RN74 326 aa9.95□□□□□ -0.82
HDAC3-213ENST00000492506 SPINT2O43291 252 aa9.95□□□□□ -0.82
HDAC3-213ENST00000492506 COX8AP10176 69 aa9.95□□□□□ -0.82
HDAC3-213ENST00000492506 HIST1H1EP10412 219 aaKnown RBP9.95□□□□□ -0.82
HDAC3-213ENST00000492506 CKS1BP61024 79 aa9.95□□□□□ -0.82
HDAC3-213ENST00000492506 TMEM97Q5BJF2 176 aa9.95□□□□□ -0.82
HDAC3-213ENST00000492506 ZNF833PQ6ZTB9 187 aa9.95□□□□□ -0.82
HDAC3-213ENST00000492506 OR11H2Q8NH07 326 aa9.95□□□□□ -0.82
HDAC3-213ENST00000492506 CYYR1Q96J86 154 aa9.95□□□□□ -0.82
HDAC3-213ENST00000492506 FAM110AQ9BQ89 295 aa9.95□□□□□ -0.82
HDAC3-213ENST00000492506 RYR1P21817 5038 aa9.95□□□□□ -0.82
HDAC3-213ENST00000492506 IGKV1D-13A0A0B4J2D9 117 aa9.94□□□□□ -0.82
HDAC3-213ENST00000492506 RAB29O14966 203 aa9.94□□□□□ -0.82
HDAC3-213ENST00000492506 GNG7O60262 68 aa9.94□□□□□ -0.82
HDAC3-213ENST00000492506 CT45A6P0DMU7 189 aa9.94□□□□□ -0.82
HDAC3-213ENST00000492506 CT45A5P0DMU8 189 aa9.94□□□□□ -0.82
HDAC3-213ENST00000492506 CT45A7P0DMV0 189 aa9.94□□□□□ -0.82
HDAC3-213ENST00000492506 IGKV1-13P0DP09 117 aa9.94□□□□□ -0.82
HDAC3-213ENST00000492506 FABP2P12104 132 aa9.94□□□□□ -0.82
HDAC3-213ENST00000492506 AZU1P20160 251 aa9.94□□□□□ -0.82
HDAC3-213ENST00000492506 RAB31Q13636 194 aa9.94□□□□□ -0.82
HDAC3-213ENST00000492506 FOXI2Q6ZQN5 318 aa9.94□□□□□ -0.82
HDAC3-213ENST00000492506 FAM231DQ6ZW35 169 aa9.94□□□□□ -0.82
HDAC3-213ENST00000492506 ZNF114Q8NC26 417 aa9.94□□□□□ -0.82
HDAC3-213ENST00000492506 OR10AG1Q8NH19 301 aa9.94□□□□□ -0.82
HDAC3-213ENST00000492506 OR51H1Q8NH63 302 aa9.94□□□□□ -0.82
HDAC3-213ENST00000492506 LINC00476Q8WZB0 136 aa9.94□□□□□ -0.82
HDAC3-213ENST00000492506 MAP1LC3CQ9BXW4 147 aa9.94□□□□□ -0.82
HDAC3-213ENST00000492506 TRAPPC2LQ9UL33 140 aa9.94□□□□□ -0.82
HDAC3-213ENST00000492506 TRBV20OR9-2A0A075B6H5 130 aa9.93□□□□□ -0.82
HDAC3-213ENST00000492506 SCO2A0A1W2PP80 73 aa9.93□□□□□ -0.82
HDAC3-213ENST00000492506 FAM231BA6NCW3 169 aa9.93□□□□□ -0.82
HDAC3-213ENST00000492506 PMS2P5A8MQ11 134 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms