RNA–Protein interactions for RNA: ENST00000492496.1

PKP4-214, Transcript of plakophilin 4, humanhuman

TSL 3

Gene PKP4, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-214ENST00000492496 FXYD6-FXYD2A0A087WZ82 144 aa11.34□□□□□ -0.59
PKP4-214ENST00000492496 RNF222A6NCQ9 220 aa11.34□□□□□ -0.59
PKP4-214ENST00000492496 CSN1S1P47710 185 aa11.34□□□□□ -0.59
PKP4-214ENST00000492496 RAB2AP61019 212 aa11.34□□□□□ -0.59
PKP4-214ENST00000492496 RANP62826 216 aaKnown RBP11.34□□□□□ -0.59
PKP4-214ENST00000492496 SERF2P84101 59 aa11.34□□□□□ -0.59
PKP4-214ENST00000492496 HSD17B11Q8NBQ5 300 aa11.34□□□□□ -0.59
PKP4-214ENST00000492496 OR10G4Q8NGN3 311 aa11.34□□□□□ -0.59
PKP4-214ENST00000492496 OR10G9Q8NGN4 311 aa11.34□□□□□ -0.59
PKP4-214ENST00000492496 OR10G7Q8NGN6 311 aa11.34□□□□□ -0.59
PKP4-214ENST00000492496 RNASE8Q8TDE3 154 aaKnown RBP11.34□□□□□ -0.59
PKP4-214ENST00000492496 TMEM263Q8WUH6 116 aaKnown RBP11.34□□□□□ -0.59
PKP4-214ENST00000492496 Q9H3A6 140 aa11.34□□□□□ -0.59
PKP4-214ENST00000492496 SACSQ9NZJ4 4579 aa11.33□□□□□ -0.6
PKP4-214ENST00000492496 IGKV2-40A0A087WW87 121 aaPredicted RBP11.33□□□□□ -0.6
PKP4-214ENST00000492496 RBAKDNA6NC62 111 aa11.33□□□□□ -0.6
PKP4-214ENST00000492496 KLLNB2CW77 178 aa11.33□□□□□ -0.6
PKP4-214ENST00000492496 IGKV2D-40P01614 121 aaPredicted RBP11.33□□□□□ -0.6
PKP4-214ENST00000492496 MBP02144 154 aa11.33□□□□□ -0.6
PKP4-214ENST00000492496 NMBP08949 121 aa11.33□□□□□ -0.6
PKP4-214ENST00000492496 HTN1P15515 57 aa11.33□□□□□ -0.6
PKP4-214ENST00000492496 CRISP2P16562 243 aa11.33□□□□□ -0.6
PKP4-214ENST00000492496 ATP6V0CP27449 155 aa11.33□□□□□ -0.6
PKP4-214ENST00000492496 TMEM78Q5T7P6 136 aa11.33□□□□□ -0.6
PKP4-214ENST00000492496 NDUFAF3Q9BU61 184 aa11.33□□□□□ -0.6
PKP4-214ENST00000492496 TIMM8BQ9Y5J9 83 aaPredicted RBP11.33□□□□□ -0.6
PKP4-214ENST00000492496 BORCS7-ASMTA0A0B4J1R7 106 aa11.32□□□□□ -0.6
PKP4-214ENST00000492496 TRAV12-3A0A0B4J271 114 aa11.32□□□□□ -0.6
PKP4-214ENST00000492496 TRBV7-9A0A0J9YWB2 115 aa11.32□□□□□ -0.6
PKP4-214ENST00000492496 C7orf71A4D174 169 aa11.32□□□□□ -0.6
PKP4-214ENST00000492496 G3V3Q6 166 aa11.32□□□□□ -0.6
PKP4-214ENST00000492496 J3KRW8 73 aa11.32□□□□□ -0.6
PKP4-214ENST00000492496 J3QL48 77 aa11.32□□□□□ -0.6
PKP4-214ENST00000492496 CCDC28AQ8IWP9 274 aa11.32□□□□□ -0.6
PKP4-214ENST00000492496 RXFP4Q8TDU9 374 aa11.32□□□□□ -0.6
PKP4-214ENST00000492496 VGLL1Q99990 258 aa11.32□□□□□ -0.6
PKP4-214ENST00000492496 PYGO2Q9BRQ0 406 aa11.32□□□□□ -0.6
PKP4-214ENST00000492496 ZNF492Q9P255 531 aa11.32□□□□□ -0.6
PKP4-214ENST00000492496 CDC34P49427 236 aaPredicted RBP11.31□□□□□ -0.6
PKP4-214ENST00000492496 FAM74A1Q5RGS3 127 aa11.31□□□□□ -0.6
PKP4-214ENST00000492496 GNPNAT1Q96EK6 184 aaPredicted RBP11.31□□□□□ -0.6
PKP4-214ENST00000492496 OTORQ9NRC9 128 aa11.31□□□□□ -0.6
PKP4-214ENST00000492496 DNAH1Q9P2D7 4330 aa11.31□□□□□ -0.6
PKP4-214ENST00000492496 RYR2Q92736 4967 aa11.3□□□□□ -0.6
PKP4-214ENST00000492496 PLECQ15149 4684 aaKnown RBP11.3□□□□□ -0.6
PKP4-214ENST00000492496 ZNF324O75467 553 aaPredicted RBP11.3□□□□□ -0.6
PKP4-214ENST00000492496 EIF3GO75821 320 aaKnown RBP eCLIP11.3□□□□□ -0.6
PKP4-214ENST00000492496 GPX1P07203 203 aa11.3□□□□□ -0.6
PKP4-214ENST00000492496 STAG3L2P0CL84 134 aa11.3□□□□□ -0.6
PKP4-214ENST00000492496 STAG3L3P0CL85 134 aa11.3□□□□□ -0.6
PKP4-214ENST00000492496 ZNF138P52744 262 aa11.3□□□□□ -0.6
PKP4-214ENST00000492496 RPL7L1Q6DKI1 246 aaKnown RBP11.3□□□□□ -0.6
PKP4-214ENST00000492496 ARL6IP6Q8N6S5 226 aa11.3□□□□□ -0.6
PKP4-214ENST00000492496 LINC00467Q9BRT7 94 aa11.3□□□□□ -0.6
PKP4-214ENST00000492496 PGPA6NDG6 321 aa11.29□□□□□ -0.6
PKP4-214ENST00000492496 DIRC3C9JPN6 131 aa11.29□□□□□ -0.6
PKP4-214ENST00000492496 TAAR5O14804 337 aa11.29□□□□□ -0.6
PKP4-214ENST00000492496 ARL14EPLP0DKL9 152 aa11.29□□□□□ -0.6
PKP4-214ENST00000492496 DEFB130BP0DP73 79 aa11.29□□□□□ -0.6
PKP4-214ENST00000492496 DEFB130AP0DP74 79 aa11.29□□□□□ -0.6
PKP4-214ENST00000492496 HTN3P15516 51 aa11.29□□□□□ -0.6
PKP4-214ENST00000492496 CD300CQ08708 224 aa11.29□□□□□ -0.6
PKP4-214ENST00000492496 BTN1A1Q13410 526 aa11.29□□□□□ -0.6
PKP4-214ENST00000492496 ZFAND2AQ8N6M9 145 aa11.29□□□□□ -0.6
PKP4-214ENST00000492496 RAB24Q969Q5 203 aa11.29□□□□□ -0.6
PKP4-214ENST00000492496 SH3BGRL3Q9H299 93 aa11.29□□□□□ -0.6
PKP4-214ENST00000492496 LENEPQ9Y5L5 61 aa11.29□□□□□ -0.6
PKP4-214ENST00000492496 CBY3A6NI87 242 aa11.28□□□□□ -0.6
PKP4-214ENST00000492496 HMGB3O15347 200 aaKnown RBP11.28□□□□□ -0.6
PKP4-214ENST00000492496 RNASE4P34096 147 aaKnown RBP11.28□□□□□ -0.6
PKP4-214ENST00000492496 CMTM2Q8TAZ6 248 aa11.28□□□□□ -0.6
PKP4-214ENST00000492496 SUN5Q8TC36 379 aa11.28□□□□□ -0.6
PKP4-214ENST00000492496 TMED6Q8WW62 240 aa11.28□□□□□ -0.6
PKP4-214ENST00000492496 ACTR3CQ9C0K3 210 aaPredicted RBP11.28□□□□□ -0.6
PKP4-214ENST00000492496 NOP10Q9NPE3 64 aaKnown RBP11.28□□□□□ -0.6
PKP4-214ENST00000492496 SNURFLB1AK76 121 aa11.27□□□□□ -0.61
PKP4-214ENST00000492496 ATP5G1P05496 136 aa11.27□□□□□ -0.61
PKP4-214ENST00000492496 P0DMU3 169 aa11.27□□□□□ -0.61
PKP4-214ENST00000492496 FAM231AP0DMU4 169 aa11.27□□□□□ -0.61
PKP4-214ENST00000492496 FAM231CP0DMU5 169 aa11.27□□□□□ -0.61
PKP4-214ENST00000492496 ATP5G3P48201 142 aa11.27□□□□□ -0.61
PKP4-214ENST00000492496 ANXA2RQ3ZCQ2 193 aa11.27□□□□□ -0.61
PKP4-214ENST00000492496 EIF4E3Q8N5X7 224 aaKnown RBP11.27□□□□□ -0.61
PKP4-214ENST00000492496 ZNF680Q8NEM1 530 aa11.27□□□□□ -0.61
PKP4-214ENST00000492496 HYLS1Q96M11 299 aa11.27□□□□□ -0.61
PKP4-214ENST00000492496 ARPC5O15511 151 aa11.26□□□□□ -0.61
PKP4-214ENST00000492496 GCHFRP30047 84 aa11.26□□□□□ -0.61
PKP4-214ENST00000492496 DAZ2Q13117 558 aaKnown RBP11.26□□□□□ -0.61
PKP4-214ENST00000492496 LINC00612Q8N6U2 182 aa11.26□□□□□ -0.61
PKP4-214ENST00000492496 Q8TAT8 98 aa11.26□□□□□ -0.61
PKP4-214ENST00000492496 CXorf1O96002 111 aa11.25□□□□□ -0.61
PKP4-214ENST00000492496 PRR9Q5T870 116 aa11.25□□□□□ -0.61
PKP4-214ENST00000492496 TMEM88Q6PEY1 159 aa11.25□□□□□ -0.61
PKP4-214ENST00000492496 C15orf53Q8NAA6 179 aa11.25□□□□□ -0.61
PKP4-214ENST00000492496 ST6GAL2Q96JF0 529 aa11.25□□□□□ -0.61
PKP4-214ENST00000492496 TMEM167BQ9NRX6 74 aa11.25□□□□□ -0.61
PKP4-214ENST00000492496 HYDINQ4G0P3 5121 aa11.24□□□□□ -0.61
PKP4-214ENST00000492496 SERTM2A0A1B0GWG4 89 aa11.24□□□□□ -0.61
PKP4-214ENST00000492496 F5H768 121 aa11.24□□□□□ -0.61
PKP4-214ENST00000492496 RGS13O14921 159 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms