RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 IGHV3-11P01762 117 aa9.62□□□□□ -0.87
HMGN1-220ENST00000492280 Q6ZS46 218 aa9.62□□□□□ -0.87
HMGN1-220ENST00000492280 OOSP1A8MZH6 123 aa9.62□□□□□ -0.87
HMGN1-220ENST00000492280 D6R8Y8 96 aa9.62□□□□□ -0.87
HMGN1-220ENST00000492280 HAX1O00165 279 aa9.62□□□□□ -0.87
HMGN1-220ENST00000492280 GAS8-AS1O95177 125 aa9.62□□□□□ -0.87
HMGN1-220ENST00000492280 IGLC3P0DOY3 106 aa9.62□□□□□ -0.87
HMGN1-220ENST00000492280 IGLL1P15814 213 aa9.62□□□□□ -0.87
HMGN1-220ENST00000492280 BTF3P20290 206 aaKnown RBP9.62□□□□□ -0.87
HMGN1-220ENST00000492280 IL17RELQ6ZVW7 336 aa9.62□□□□□ -0.87
HMGN1-220ENST00000492280 C5orf56Q8N8D9 126 aa9.62□□□□□ -0.87
HMGN1-220ENST00000492280 IGHV4-30-2A0A087WSY4 118 aa9.61□□□□□ -0.87
HMGN1-220ENST00000492280 TCAPO15273 167 aa9.61□□□□□ -0.87
HMGN1-220ENST00000492280 LEPROTL1O95214 131 aa9.61□□□□□ -0.87
HMGN1-220ENST00000492280 LINC00614P0C842 121 aa9.61□□□□□ -0.87
HMGN1-220ENST00000492280 LYPD1Q8N2G4 141 aa9.61□□□□□ -0.87
HMGN1-220ENST00000492280 MAPK1IP1LQ8NDC0 245 aa9.61□□□□□ -0.87
HMGN1-220ENST00000492280 NF1P21359 2839 aa9.61□□□□□ -0.87
HMGN1-220ENST00000492280 SPRY2O43597 315 aa9.61□□□□□ -0.87
HMGN1-220ENST00000492280 ORM1P02763 201 aa9.61□□□□□ -0.87
HMGN1-220ENST00000492280 PRB1P04280 392 aa9.61□□□□□ -0.87
HMGN1-220ENST00000492280 PDE6HQ13956 83 aa9.61□□□□□ -0.87
HMGN1-220ENST00000492280 ZNF48Q96MX3 618 aaPredicted RBP9.61□□□□□ -0.87
HMGN1-220ENST00000492280 CCL19Q99731 98 aa9.61□□□□□ -0.87
HMGN1-220ENST00000492280 BUB3O43684 328 aa9.6□□□□□ -0.87
HMGN1-220ENST00000492280 FAM162BQ5T6X4 162 aa9.6□□□□□ -0.87
HMGN1-220ENST00000492280 RNF24Q9Y225 148 aa9.6□□□□□ -0.87
HMGN1-220ENST00000492280 IFI27P40305 119 aaPredicted RBP9.6□□□□□ -0.87
HMGN1-220ENST00000492280 TMEM95Q3KNT9 176 aa9.6□□□□□ -0.87
HMGN1-220ENST00000492280 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.6□□□□□ -0.87
HMGN1-220ENST00000492280 WFDC3Q8IUB2 231 aa9.6□□□□□ -0.87
HMGN1-220ENST00000492280 PIFOQ8TCI5 191 aa9.6□□□□□ -0.87
HMGN1-220ENST00000492280 TMEM70Q9BUB7 260 aa9.6□□□□□ -0.87
HMGN1-220ENST00000492280 OR4C46A6NHA9 309 aa9.59□□□□□ -0.87
HMGN1-220ENST00000492280 PSG9Q00887 426 aa9.59□□□□□ -0.87
HMGN1-220ENST00000492280 ZNF25P17030 456 aaPredicted RBP9.59□□□□□ -0.87
HMGN1-220ENST00000492280 HINT1P49773 126 aaPredicted RBP9.59□□□□□ -0.87
HMGN1-220ENST00000492280 HNRNPA3P51991 378 aaKnown RBP9.59□□□□□ -0.87
HMGN1-220ENST00000492280 ATP5J2P56134 94 aa9.59□□□□□ -0.87
HMGN1-220ENST00000492280 RIGQ13278 110 aa9.59□□□□□ -0.87
HMGN1-220ENST00000492280 UNQ9165/PRO28630Q6UXU0 137 aa9.59□□□□□ -0.87
HMGN1-220ENST00000492280 ZNF575Q86XF7 245 aa9.59□□□□□ -0.87
HMGN1-220ENST00000492280 TRGV3P03979 118 aa9.58□□□□□ -0.88
HMGN1-220ENST00000492280 BLCAPP62952 87 aa9.58□□□□□ -0.88
HMGN1-220ENST00000492280 CYB5R2Q6BCY4 276 aa9.58□□□□□ -0.88
HMGN1-220ENST00000492280 FAM231BA6NCW3 169 aa9.58□□□□□ -0.88
HMGN1-220ENST00000492280 H3BUX3 64 aa9.58□□□□□ -0.88
HMGN1-220ENST00000492280 IGF1P05019 195 aa9.58□□□□□ -0.88
HMGN1-220ENST00000492280 EDN2P20800 178 aa9.58□□□□□ -0.88
HMGN1-220ENST00000492280 TWIST1Q15672 202 aa9.58□□□□□ -0.88
HMGN1-220ENST00000492280 TRAV41A0A0B4J266 112 aa9.57□□□□□ -0.88
HMGN1-220ENST00000492280 TRBV6-1A0A0K0K1D8 114 aa9.57□□□□□ -0.88
HMGN1-220ENST00000492280 SYS1-DBNDD2H3BUS1 97 aa9.57□□□□□ -0.88
HMGN1-220ENST00000492280 AVPP01185 164 aa9.57□□□□□ -0.88
HMGN1-220ENST00000492280 STPG4Q8N801 248 aa9.57□□□□□ -0.88
HMGN1-220ENST00000492280 NDFIP1Q9BT67 221 aa9.57□□□□□ -0.88
HMGN1-220ENST00000492280 KLK15Q9H2R5 256 aa9.57□□□□□ -0.88
HMGN1-220ENST00000492280 C11orf21Q9P2W6 132 aa9.57□□□□□ -0.88
HMGN1-220ENST00000492280 IGHV1-69DA0A0B4J2H0 117 aa9.57□□□□□ -0.88
HMGN1-220ENST00000492280 GOSR1O95249 250 aa9.57□□□□□ -0.88
HMGN1-220ENST00000492280 IGHV1-69P01742 117 aa9.57□□□□□ -0.88
HMGN1-220ENST00000492280 ERASQ7Z444 233 aa9.57□□□□□ -0.88
HMGN1-220ENST00000492280 PRSS3P2Q8NHM4 247 aa9.57□□□□□ -0.88
HMGN1-220ENST00000492280 UQCR10Q9UDW1 63 aa9.57□□□□□ -0.88
HMGN1-220ENST00000492280 AGRNO00468 2067 aa9.57□□□□□ -0.88
HMGN1-220ENST00000492280 TRAV8-2A0A0B4J237 113 aa9.56□□□□□ -0.88
HMGN1-220ENST00000492280 SNAI2O43623 268 aa9.56□□□□□ -0.88
HMGN1-220ENST00000492280 RPLP1P05386 114 aaKnown RBP9.56□□□□□ -0.88
HMGN1-220ENST00000492280 GATA1P15976 413 aaPredicted RBP9.56□□□□□ -0.88
HMGN1-220ENST00000492280 FOXE3Q13461 319 aa9.56□□□□□ -0.88
HMGN1-220ENST00000492280 LBHQ53QV2 105 aaPredicted RBP9.56□□□□□ -0.88
HMGN1-220ENST00000492280 OR8A1Q8NGG7 326 aa9.56□□□□□ -0.88
HMGN1-220ENST00000492280 PIMREGQ9BSJ6 248 aa9.56□□□□□ -0.88
HMGN1-220ENST00000492280 AP5S1Q9NUS5 200 aa9.56□□□□□ -0.88
HMGN1-220ENST00000492280 MOB4Q9Y3A3 225 aa9.56□□□□□ -0.88
HMGN1-220ENST00000492280 TRAV9-2A0A087WT02 112 aa9.56□□□□□ -0.88
HMGN1-220ENST00000492280 SMAD7O15105 426 aaKnown RBP9.56□□□□□ -0.88
HMGN1-220ENST00000492280 EVI2AP22794 236 aa9.56□□□□□ -0.88
HMGN1-220ENST00000492280 PAX8Q06710 450 aa9.56□□□□□ -0.88
HMGN1-220ENST00000492280 MRPL51Q4U2R6 128 aaKnown RBP9.56□□□□□ -0.88
HMGN1-220ENST00000492280 C8orf86Q6ZUL3 223 aa9.56□□□□□ -0.88
HMGN1-220ENST00000492280 FER1L6-AS1Q8NA97 138 aa9.56□□□□□ -0.88
HMGN1-220ENST00000492280 EEF1AKMT3Q96AZ1 226 aa9.56□□□□□ -0.88
HMGN1-220ENST00000492280 NPYP01303 97 aa9.55□□□□□ -0.88
HMGN1-220ENST00000492280 ATP5G2Q06055 141 aa9.55□□□□□ -0.88
HMGN1-220ENST00000492280 FA2HQ7L5A8 372 aa9.55□□□□□ -0.88
HMGN1-220ENST00000492280 S100A7AQ86SG5 101 aa9.55□□□□□ -0.88
HMGN1-220ENST00000492280 PRELID3AQ96N28 172 aa9.55□□□□□ -0.88
HMGN1-220ENST00000492280 AGPAT4-IT1Q9H0P7 198 aa9.55□□□□□ -0.88
HMGN1-220ENST00000492280 SIGLEC8Q9NYZ4 499 aa9.55□□□□□ -0.88
HMGN1-220ENST00000492280 A0A096LNJ9 63 aa9.55□□□□□ -0.88
HMGN1-220ENST00000492280 SCGB2A1O75556 95 aa9.55□□□□□ -0.88
HMGN1-220ENST00000492280 SRD5A1P18405 259 aa9.55□□□□□ -0.88
HMGN1-220ENST00000492280 TSPOP30536 169 aa9.55□□□□□ -0.88
HMGN1-220ENST00000492280 CHCHD1Q96BP2 118 aaKnown RBP9.55□□□□□ -0.88
HMGN1-220ENST00000492280 NOTCH3Q9UM47 2321 aa9.55□□□□□ -0.88
HMGN1-220ENST00000492280 DMRTA1Q5VZB9 504 aa9.54□□□□□ -0.88
HMGN1-220ENST00000492280 FAM104BQ5XKR9 115 aa9.54□□□□□ -0.88
HMGN1-220ENST00000492280 PRSS57Q6UWY2 283 aa9.54□□□□□ -0.88
HMGN1-220ENST00000492280 C10orf105Q8TEF2 133 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms