RNA–Protein interactions for RNA: ENST00000491824.1

HCLS1-210, Transcript of hematopoietic cell-specific Lyn substrate 1, human

TSL 3

Gene HCLS1, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HCLS1-210	ENST00000491824		Q9H3A6	140 aa		12.02	□□□□□ -0.49
HCLS1-210	ENST00000491824	TMPRSS5	Q9H3S3	457 aa		12.02	□□□□□ -0.49
HCLS1-210	ENST00000491824	IGHV3OR16-12	A0A075B7B8	117 aa		12.01	□□□□□ -0.49
HCLS1-210	ENST00000491824	IGHV4-28	A0A0C4DH34	117 aa		12.01	□□□□□ -0.49
HCLS1-210	ENST00000491824	RBAKDN	A6NC62	111 aa		12.01	□□□□□ -0.49
HCLS1-210	ENST00000491824	FBLL1	A6NHQ2	334 aa	Known RBP	12.01	□□□□□ -0.49
HCLS1-210	ENST00000491824		A8MTW9	85 aa		12.01	□□□□□ -0.49
HCLS1-210	ENST00000491824	EIF3G	O75821	320 aa	Known RBP eCLIP	12.01	□□□□□ -0.49
HCLS1-210	ENST00000491824	INS	P01308	110 aa		12.01	□□□□□ -0.49
HCLS1-210	ENST00000491824	SLC25A5	P05141	298 aa	Known RBP	12.01	□□□□□ -0.49
HCLS1-210	ENST00000491824	C5orf17	Q8NAS9	161 aa		12.01	□□□□□ -0.49
HCLS1-210	ENST00000491824	OR8A1	Q8NGG7	326 aa		12.01	□□□□□ -0.49
HCLS1-210	ENST00000491824	SLC35B3	Q9H1N7	401 aa		12.01	□□□□□ -0.49
HCLS1-210	ENST00000491824	SMDT1	Q9H4I9	107 aa		12.01	□□□□□ -0.49
HCLS1-210	ENST00000491824	KLK5	Q9Y337	293 aa	Predicted RBP	12.01	□□□□□ -0.49
HCLS1-210	ENST00000491824	TMEM189	A5PLL7	270 aa		12	□□□□□ -0.49
HCLS1-210	ENST00000491824	PGP	A6NDG6	321 aa		12	□□□□□ -0.49
HCLS1-210	ENST00000491824	SMIM9	A6NGZ8	99 aa		12	□□□□□ -0.49
HCLS1-210	ENST00000491824		H3BTX0	84 aa		12	□□□□□ -0.49
HCLS1-210	ENST00000491824	SNRPC	P09234	159 aa	Known RBP	12	□□□□□ -0.49
HCLS1-210	ENST00000491824	CSN1S1	P47710	185 aa		12	□□□□□ -0.49
HCLS1-210	ENST00000491824	ICAM4	Q14773	271 aa		12	□□□□□ -0.49
HCLS1-210	ENST00000491824		Q8NAQ8	132 aa		12	□□□□□ -0.49
HCLS1-210	ENST00000491824	CSNK1G2-AS1	Q8NCQ2	148 aa		12	□□□□□ -0.49
HCLS1-210	ENST00000491824	HIST1H2BA	Q96A08	127 aa		12	□□□□□ -0.49
HCLS1-210	ENST00000491824	MED9	Q9NWA0	146 aa		12	□□□□□ -0.49
HCLS1-210	ENST00000491824	AGRN	O00468	2067 aa		11.99	□□□□□ -0.49
HCLS1-210	ENST00000491824	TRBV7-9	A0A0J9YWB2	115 aa		11.99	□□□□□ -0.49
HCLS1-210	ENST00000491824	GGTLC3	B5MD39	225 aa		11.99	□□□□□ -0.49
HCLS1-210	ENST00000491824	DEFB4A	O15263	64 aa		11.99	□□□□□ -0.49
HCLS1-210	ENST00000491824	TSPO	P30536	169 aa		11.99	□□□□□ -0.49
HCLS1-210	ENST00000491824	SUMO1	P63165	101 aa	Known RBP	11.99	□□□□□ -0.49
HCLS1-210	ENST00000491824	IGF2BP2-AS1	Q96M15	143 aa		11.99	□□□□□ -0.49
HCLS1-210	ENST00000491824	VAX2	Q9UIW0	290 aa		11.99	□□□□□ -0.49
HCLS1-210	ENST00000491824	YTHDF2	Q9Y5A9	579 aa	Known RBP	11.99	□□□□□ -0.49
HCLS1-210	ENST00000491824	TEX48	A0A1B0GUV7	120 aa		11.98	□□□□□ -0.49
HCLS1-210	ENST00000491824		F6UZH7	168 aa		11.98	□□□□□ -0.49
HCLS1-210	ENST00000491824	PAGE4	O60829	102 aa		11.98	□□□□□ -0.49
HCLS1-210	ENST00000491824	ZNF705D	P0CH99	300 aa	Predicted RBP	11.98	□□□□□ -0.49
HCLS1-210	ENST00000491824	ZNF705B	P0CI00	300 aa	Predicted RBP	11.98	□□□□□ -0.49
HCLS1-210	ENST00000491824	BCL2	P10415	239 aa		11.98	□□□□□ -0.49
HCLS1-210	ENST00000491824	HLA-DMB	P28068	263 aa		11.98	□□□□□ -0.49
HCLS1-210	ENST00000491824	SPINK13	Q1W4C9	94 aa		11.98	□□□□□ -0.49
HCLS1-210	ENST00000491824	IQCF2	Q8IXL9	164 aa		11.98	□□□□□ -0.49
HCLS1-210	ENST00000491824	EXOC3-AS1	Q8N2X6	119 aa		11.98	□□□□□ -0.49
HCLS1-210	ENST00000491824	CMTM2	Q8TAZ6	248 aa		11.98	□□□□□ -0.49
HCLS1-210	ENST00000491824	FAM210A	Q96ND0	272 aa		11.98	□□□□□ -0.49
HCLS1-210	ENST00000491824	NEU1	Q99519	415 aa		11.98	□□□□□ -0.49
HCLS1-210	ENST00000491824	GNG13	Q9P2W3	67 aa		11.98	□□□□□ -0.49
HCLS1-210	ENST00000491824	EPDR1	Q9UM22	224 aa		11.98	□□□□□ -0.49
HCLS1-210	ENST00000491824		X6R8D5	127 aa		11.98	□□□□□ -0.49
HCLS1-210	ENST00000491824	DIRC3	C9JPN6	131 aa		11.97	□□□□□ -0.49
HCLS1-210	ENST00000491824	MEF2B	Q02080	365 aa	Predicted RBP	11.97	□□□□□ -0.49
HCLS1-210	ENST00000491824	ZNF506	Q5JVG8	444 aa		11.97	□□□□□ -0.49
HCLS1-210	ENST00000491824	ZNF705A	Q6ZN79	300 aa	Predicted RBP	11.97	□□□□□ -0.49
HCLS1-210	ENST00000491824	C9orf47	Q6ZRZ4	202 aa		11.97	□□□□□ -0.49
HCLS1-210	ENST00000491824	LINC00477	Q96M19	166 aa		11.97	□□□□□ -0.49
HCLS1-210	ENST00000491824	DNAH7	Q8WXX0	4024 aa		11.96	□□□□□ -0.49
HCLS1-210	ENST00000491824	TRBV6-1	A0A0K0K1D8	114 aa		11.96	□□□□□ -0.49
HCLS1-210	ENST00000491824	LOC102723971	A0A1B0GUV8	181 aa		11.96	□□□□□ -0.49
HCLS1-210	ENST00000491824	RBFOX3	A6NFN3	312 aa		11.96	□□□□□ -0.49
HCLS1-210	ENST00000491824	ZNF705F	A8MVS1	300 aa	Predicted RBP	11.96	□□□□□ -0.49
HCLS1-210	ENST00000491824		M0R2Z0	102 aa		11.96	□□□□□ -0.49
HCLS1-210	ENST00000491824		M0R3E3	92 aa		11.96	□□□□□ -0.49
HCLS1-210	ENST00000491824	PDE6D	O43924	150 aa		11.96	□□□□□ -0.49
HCLS1-210	ENST00000491824	TCRA	P04437	139 aa		11.96	□□□□□ -0.49
HCLS1-210	ENST00000491824	S100A9	P06702	114 aa	Known RBP	11.96	□□□□□ -0.49
HCLS1-210	ENST00000491824	RRN3P1	Q2M238	152 aa		11.96	□□□□□ -0.49
HCLS1-210	ENST00000491824	CEMP1	Q6PRD7	247 aa	Predicted RBP	11.96	□□□□□ -0.49
HCLS1-210	ENST00000491824	TMEM256	Q8N2U0	113 aa		11.96	□□□□□ -0.49
HCLS1-210	ENST00000491824	PHLDA1	Q8WV24	401 aa	Predicted RBP	11.96	□□□□□ -0.49
HCLS1-210	ENST00000491824	C11orf52	Q96A22	123 aa		11.96	□□□□□ -0.49
HCLS1-210	ENST00000491824	ODF3	Q96PU9	254 aa		11.96	□□□□□ -0.49
HCLS1-210	ENST00000491824	ATG101	Q9BSB4	218 aa		11.96	□□□□□ -0.49
HCLS1-210	ENST00000491824	KLF12	Q9Y4X4	402 aa		11.96	□□□□□ -0.49
HCLS1-210	ENST00000491824	LENEP	Q9Y5L5	61 aa		11.96	□□□□□ -0.49
HCLS1-210	ENST00000491824	RAB19	A4D1S5	217 aa		11.95	□□□□□ -0.5
HCLS1-210	ENST00000491824	C11orf94	C9JXX5	98 aa		11.95	□□□□□ -0.5
HCLS1-210	ENST00000491824	NPIPB6	E9PJ23	425 aa		11.95	□□□□□ -0.5
HCLS1-210	ENST00000491824	TMEM250	H0YL14	139 aa		11.95	□□□□□ -0.5
HCLS1-210	ENST00000491824		K7EQM0	130 aa		11.95	□□□□□ -0.5
HCLS1-210	ENST00000491824	LEP	P41159	167 aa		11.95	□□□□□ -0.5
HCLS1-210	ENST00000491824	CDKN1B	P46527	198 aa		11.95	□□□□□ -0.5
HCLS1-210	ENST00000491824	NANOS2	P60321	138 aa	Known RBP	11.95	□□□□□ -0.5
HCLS1-210	ENST00000491824	CST9LP1	Q5W188	147 aa		11.95	□□□□□ -0.5
HCLS1-210	ENST00000491824	AMTN	Q6UX39	209 aa		11.95	□□□□□ -0.5
HCLS1-210	ENST00000491824		A0A1B0GV50	99 aa		11.94	□□□□□ -0.5
HCLS1-210	ENST00000491824	SPART-AS1	P0CW21	52 aa		11.94	□□□□□ -0.5
HCLS1-210	ENST00000491824	RBMY1A1	P0DJD3	496 aa	Known RBP	11.94	□□□□□ -0.5
HCLS1-210	ENST00000491824	RBMY1C	P0DJD4	496 aa		11.94	□□□□□ -0.5
HCLS1-210	ENST00000491824	UBE2G2	P60604	165 aa		11.94	□□□□□ -0.5
HCLS1-210	ENST00000491824	RBMY1F	Q15415	496 aa	Known RBP	11.94	□□□□□ -0.5
HCLS1-210	ENST00000491824	CYB561D1	Q8N8Q1	229 aa		11.94	□□□□□ -0.5
HCLS1-210	ENST00000491824	KMT2C	Q8NEZ4	4911 aa	Known RBP	11.94	□□□□□ -0.5
HCLS1-210	ENST00000491824	EMP1	P54849	157 aa		11.93	□□□□□ -0.5
HCLS1-210	ENST00000491824	TMEM75	Q8N9X5	138 aa		11.93	□□□□□ -0.5
HCLS1-210	ENST00000491824	LINC00862	A6NCI5	91 aa		11.92	□□□□□ -0.5
HCLS1-210	ENST00000491824	PRAC2	D3DTV9	90 aa		11.92	□□□□□ -0.5
HCLS1-210	ENST00000491824	PEX7	O00628	323 aa		11.92	□□□□□ -0.5
HCLS1-210	ENST00000491824	ATP5G3	P48201	142 aa		11.92	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms