RNA–Protein interactions for RNA: ENST00000491060.1

TRAIP-211, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 1,046 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-211ENST00000491060 RANP62826 216 aaKnown RBP9.59□□□□□ -0.87
TRAIP-211ENST00000491060 UBE2L3P68036 154 aaKnown RBP9.59□□□□□ -0.87
TRAIP-211ENST00000491060 OXA1LQ15070 435 aa9.59□□□□□ -0.87
TRAIP-211ENST00000491060 RNF141Q8WVD5 230 aa9.59□□□□□ -0.87
TRAIP-211ENST00000491060 HYLS1Q96M11 299 aa9.59□□□□□ -0.87
TRAIP-211ENST00000491060 ATG101Q9BSB4 218 aa9.59□□□□□ -0.87
TRAIP-211ENST00000491060 TIMM8BQ9Y5J9 83 aaPredicted RBP9.59□□□□□ -0.87
TRAIP-211ENST00000491060 ATP5G1P05496 136 aa9.58□□□□□ -0.88
TRAIP-211ENST00000491060 GPX1P07203 203 aa9.58□□□□□ -0.88
TRAIP-211ENST00000491060 NBEAP1P0C6P0 100 aa9.58□□□□□ -0.88
TRAIP-211ENST00000491060 PET100P0DJ07 73 aa9.58□□□□□ -0.88
TRAIP-211ENST00000491060 ATP5G3P48201 142 aa9.58□□□□□ -0.88
TRAIP-211ENST00000491060 PRR9Q5T870 116 aa9.58□□□□□ -0.88
TRAIP-211ENST00000491060 RNASE8Q8TDE3 154 aaKnown RBP9.58□□□□□ -0.88
TRAIP-211ENST00000491060 TMEM263Q8WUH6 116 aaKnown RBP9.58□□□□□ -0.88
TRAIP-211ENST00000491060 FXYD5Q96DB9 178 aa9.58□□□□□ -0.88
TRAIP-211ENST00000491060 KCNIP2Q9NS61 270 aa9.58□□□□□ -0.88
TRAIP-211ENST00000491060 C7orf71A4D174 169 aa9.57□□□□□ -0.88
TRAIP-211ENST00000491060 CBY3A6NI87 242 aa9.57□□□□□ -0.88
TRAIP-211ENST00000491060 RAB2AP61019 212 aa9.57□□□□□ -0.88
TRAIP-211ENST00000491060 TMEM78Q5T7P6 136 aa9.57□□□□□ -0.88
TRAIP-211ENST00000491060 CHAC2Q8WUX2 184 aa9.57□□□□□ -0.88
TRAIP-211ENST00000491060 MED28Q9H204 178 aa9.57□□□□□ -0.88
TRAIP-211ENST00000491060 GSN-AS1Q9NRJ2 163 aa9.57□□□□□ -0.88
TRAIP-211ENST00000491060 TP53TG3Q9ULZ0 132 aa9.57□□□□□ -0.88
TRAIP-211ENST00000491060 ZNF253O75346 499 aa9.56□□□□□ -0.88
TRAIP-211ENST00000491060 MUC21Q5SSG8 566 aa9.56□□□□□ -0.88
TRAIP-211ENST00000491060 Q6ZTI0 123 aa9.56□□□□□ -0.88
TRAIP-211ENST00000491060 ZNF503Q96F45 646 aa9.56□□□□□ -0.88
TRAIP-211ENST00000491060 MRPL32Q9BYC8 188 aaKnown RBP9.56□□□□□ -0.88
TRAIP-211ENST00000491060 Q9H3A6 140 aa9.56□□□□□ -0.88
TRAIP-211ENST00000491060 PRELID1Q9Y255 219 aa9.56□□□□□ -0.88
TRAIP-211ENST00000491060 TRAV26-1A0A087WT03 109 aa9.55□□□□□ -0.88
TRAIP-211ENST00000491060 RGS13O14921 159 aa9.55□□□□□ -0.88
TRAIP-211ENST00000491060 IGHV3-53P01767 116 aa9.55□□□□□ -0.88
TRAIP-211ENST00000491060 SLC25A5P05141 298 aaKnown RBP9.55□□□□□ -0.88
TRAIP-211ENST00000491060 HSD17B11Q8NBQ5 300 aa9.55□□□□□ -0.88
TRAIP-211ENST00000491060 MRPL53Q96EL3 112 aaKnown RBP9.55□□□□□ -0.88
TRAIP-211ENST00000491060 TMPRSS5Q9H3S3 457 aa9.55□□□□□ -0.88
TRAIP-211ENST00000491060 TRGV1A0A0A0MS02 117 aa9.54□□□□□ -0.88
TRAIP-211ENST00000491060 HOXA5P20719 270 aa9.54□□□□□ -0.88
TRAIP-211ENST00000491060 CSN1S1P47710 185 aa9.54□□□□□ -0.88
TRAIP-211ENST00000491060 PDE6HQ13956 83 aa9.54□□□□□ -0.88
TRAIP-211ENST00000491060 KHDC3LQ587J8 217 aa9.54□□□□□ -0.88
TRAIP-211ENST00000491060 Q5BKY6 102 aa9.54□□□□□ -0.88
TRAIP-211ENST00000491060 ZNF493Q6ZR52 646 aa9.54□□□□□ -0.88
TRAIP-211ENST00000491060 FAM210BQ96KR6 192 aa9.54□□□□□ -0.88
TRAIP-211ENST00000491060 LINC00477Q96M19 166 aa9.54□□□□□ -0.88
TRAIP-211ENST00000491060 C20orf144Q9BQM9 153 aa9.54□□□□□ -0.88
TRAIP-211ENST00000491060 MRPL16Q9NX20 251 aaKnown RBP9.54□□□□□ -0.88
TRAIP-211ENST00000491060 NAGKQ9UJ70 344 aa9.54□□□□□ -0.88
TRAIP-211ENST00000491060 KLF12Q9Y4X4 402 aa9.54□□□□□ -0.88
TRAIP-211ENST00000491060 TRGV2A0A075B6R0 118 aa9.53□□□□□ -0.88
TRAIP-211ENST00000491060 A0A1W2PPV4 95 aa9.53□□□□□ -0.88
TRAIP-211ENST00000491060 PRSS29PA6NIE9 313 aa9.53□□□□□ -0.88
TRAIP-211ENST00000491060 RTL8CO15255 209 aa9.53□□□□□ -0.88
TRAIP-211ENST00000491060 GNG5P63218 68 aa9.53□□□□□ -0.88
TRAIP-211ENST00000491060 ACOT6Q3I5F7 207 aaPredicted RBP9.53□□□□□ -0.88
TRAIP-211ENST00000491060 C15orf53Q8NAA6 179 aa9.53□□□□□ -0.88
TRAIP-211ENST00000491060 SGK494Q96LW2 274 aa9.53□□□□□ -0.88
TRAIP-211ENST00000491060 ODF3Q96PU9 254 aa9.53□□□□□ -0.88
TRAIP-211ENST00000491060 FXYD6-FXYD2A0A087WZ82 144 aa9.52□□□□□ -0.89
TRAIP-211ENST00000491060 PGPA6NDG6 321 aa9.52□□□□□ -0.89
TRAIP-211ENST00000491060 ZNF138P52744 262 aa9.52□□□□□ -0.89
TRAIP-211ENST00000491060 C9orf47Q6ZRZ4 202 aa9.52□□□□□ -0.89
TRAIP-211ENST00000491060 IQCF2Q8IXL9 164 aa9.52□□□□□ -0.89
TRAIP-211ENST00000491060 EIF4E3Q8N5X7 224 aaKnown RBP9.52□□□□□ -0.89
TRAIP-211ENST00000491060 OR10G4Q8NGN3 311 aa9.52□□□□□ -0.89
TRAIP-211ENST00000491060 OR10G9Q8NGN4 311 aa9.52□□□□□ -0.89
TRAIP-211ENST00000491060 OR10G7Q8NGN6 311 aa9.52□□□□□ -0.89
TRAIP-211ENST00000491060 GNPNAT1Q96EK6 184 aaPredicted RBP9.52□□□□□ -0.89
TRAIP-211ENST00000491060 ARPC5LQ9BPX5 153 aa9.52□□□□□ -0.89
TRAIP-211ENST00000491060 PYGO2Q9BRQ0 406 aa9.52□□□□□ -0.89
TRAIP-211ENST00000491060 ZNF492Q9P255 531 aa9.52□□□□□ -0.89
TRAIP-211ENST00000491060 KLLNB2CW77 178 aa9.51□□□□□ -0.89
TRAIP-211ENST00000491060 F6UZH7 168 aa9.51□□□□□ -0.89
TRAIP-211ENST00000491060 ZNF324O75467 553 aaPredicted RBP9.51□□□□□ -0.89
TRAIP-211ENST00000491060 PTTG1O95997 202 aa9.51□□□□□ -0.89
TRAIP-211ENST00000491060 TAS2R45P59539 299 aa9.51□□□□□ -0.89
TRAIP-211ENST00000491060 ZFAND2AQ8N6M9 145 aa9.51□□□□□ -0.89
TRAIP-211ENST00000491060 FAM19A4Q96LR4 140 aa9.51□□□□□ -0.89
TRAIP-211ENST00000491060 SH3BGRL3Q9H299 93 aa9.51□□□□□ -0.89
TRAIP-211ENST00000491060 DNAH17Q9UFH2 4485 aa9.5□□□□□ -0.89
TRAIP-211ENST00000491060 DNAH2Q9P225 4427 aa9.5□□□□□ -0.89
TRAIP-211ENST00000491060 IGHV1OR15-1A0A075B7D0 117 aa9.5□□□□□ -0.89
TRAIP-211ENST00000491060 DIRC3C9JPN6 131 aa9.5□□□□□ -0.89
TRAIP-211ENST00000491060 GOLT1AQ6ZVE7 132 aa9.5□□□□□ -0.89
TRAIP-211ENST00000491060 SSX7Q7RTT5 188 aa9.5□□□□□ -0.89
TRAIP-211ENST00000491060 C11orf72Q8NBR9 251 aa9.5□□□□□ -0.89
TRAIP-211ENST00000491060 CMTM2Q8TAZ6 248 aa9.5□□□□□ -0.89
TRAIP-211ENST00000491060 LINC00588Q9Y4M8 146 aa9.5□□□□□ -0.89
TRAIP-211ENST00000491060 HECTD4Q9Y4D8 3996 aa9.49□□□□□ -0.89
TRAIP-211ENST00000491060 A0A096LPF7 62 aa9.49□□□□□ -0.89
TRAIP-211ENST00000491060 TRAV8-1A0A0A6YYK1 113 aa9.49□□□□□ -0.89
TRAIP-211ENST00000491060 ARL14EPLP0DKL9 152 aa9.49□□□□□ -0.89
TRAIP-211ENST00000491060 M6PRP20645 277 aa9.49□□□□□ -0.89
TRAIP-211ENST00000491060 ATP6V0CP27449 155 aa9.49□□□□□ -0.89
TRAIP-211ENST00000491060 CCL18P55774 89 aa9.49□□□□□ -0.89
TRAIP-211ENST00000491060 TMEM183BQ1AE95 376 aa9.49□□□□□ -0.89
TRAIP-211ENST00000491060 RNF212Q495C1 297 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms