RNA–Protein interactions for RNA: ENST00000490993.5

NPHP3-208, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 5,197 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-208ENST00000490993 C16orf54Q6UWD8 224 aa5.72□□□□□ -1.49
NPHP3-208ENST00000490993 AMN1Q8IY45 258 aa5.72□□□□□ -1.49
NPHP3-208ENST00000490993 IFI27L1Q96BM0 104 aa5.72□□□□□ -1.49
NPHP3-208ENST00000490993 MRAP2Q96G30 205 aa5.72□□□□□ -1.49
NPHP3-208ENST00000490993 A0A1B0GUS0 222 aa5.72□□□□□ -1.49
NPHP3-208ENST00000490993 LAGE3Q14657 143 aa5.72□□□□□ -1.49
NPHP3-208ENST00000490993 Q6ZWC4 215 aa5.72□□□□□ -1.49
NPHP3-208ENST00000490993 SCGB3A1Q96QR1 104 aa5.72□□□□□ -1.49
NPHP3-208ENST00000490993 DGAT2L7PQ6IED9 249 aa5.71□□□□□ -1.49
NPHP3-208ENST00000490993 OR4C5Q8NGB2 326 aa5.71□□□□□ -1.49
NPHP3-208ENST00000490993 LRRC75A-AS1Q8N1F1 130 aa5.71□□□□□ -1.5
NPHP3-208ENST00000490993 C14orf144Q96I85 54 aa5.71□□□□□ -1.5
NPHP3-208ENST00000490993 DUX3Q96PT4 197 aa5.71□□□□□ -1.5
NPHP3-208ENST00000490993 FAM74A4Q5TZK3 123 aa5.71□□□□□ -1.5
NPHP3-208ENST00000490993 MTURNQ8N3F0 131 aa5.71□□□□□ -1.5
NPHP3-208ENST00000490993 TMEM213A2RRL7 107 aa5.71□□□□□ -1.5
NPHP3-208ENST00000490993 IGF1P05019 195 aa5.71□□□□□ -1.5
NPHP3-208ENST00000490993 GTF2H5Q6ZYL4 71 aa5.71□□□□□ -1.5
NPHP3-208ENST00000490993 MLST8Q9BVC4 326 aa5.71□□□□□ -1.5
NPHP3-208ENST00000490993 PRR14LQ5THK1 2151 aa5.7□□□□□ -1.5
NPHP3-208ENST00000490993 K7EMT4 169 aa5.7□□□□□ -1.5
NPHP3-208ENST00000490993 SRD5A1P18405 259 aa5.7□□□□□ -1.5
NPHP3-208ENST00000490993 PLA2G5P39877 138 aa5.7□□□□□ -1.5
NPHP3-208ENST00000490993 OR1N2Q8NGR9 330 aa5.7□□□□□ -1.5
NPHP3-208ENST00000490993 C18orf15Q96N68 181 aa5.7□□□□□ -1.5
NPHP3-208ENST00000490993 FOXC2Q99958 501 aa5.7□□□□□ -1.5
NPHP3-208ENST00000490993 PTPRQQ9UMZ3 2332 aa5.7□□□□□ -1.5
NPHP3-208ENST00000490993 C7orf71A4D174 169 aa5.7□□□□□ -1.5
NPHP3-208ENST00000490993 LINC01619G3V211 115 aa5.7□□□□□ -1.5
NPHP3-208ENST00000490993 FCN3O75636 299 aa5.7□□□□□ -1.5
NPHP3-208ENST00000490993 LOXL1Q08397 574 aaPredicted RBP5.7□□□□□ -1.5
NPHP3-208ENST00000490993 LYRM7Q5U5X0 104 aa5.7□□□□□ -1.5
NPHP3-208ENST00000490993 SCGB1D4Q6XE38 83 aa5.7□□□□□ -1.5
NPHP3-208ENST00000490993 AGPAT4-IT1Q9H0P7 198 aa5.7□□□□□ -1.5
NPHP3-208ENST00000490993 PRB4P10163 310 aaPredicted RBP5.7□□□□□ -1.5
NPHP3-208ENST00000490993 MRPL51Q4U2R6 128 aaKnown RBP5.7□□□□□ -1.5
NPHP3-208ENST00000490993 TEX43Q6ZNM6 134 aa5.7□□□□□ -1.5
NPHP3-208ENST00000490993 OR2K2Q8NGT1 345 aa5.7□□□□□ -1.5
NPHP3-208ENST00000490993 POLEQ07864 2286 aa5.7□□□□□ -1.5
NPHP3-208ENST00000490993 A0A1B0GV90 55 aa5.7□□□□□ -1.5
NPHP3-208ENST00000490993 IGHV4-59P01825 116 aa5.7□□□□□ -1.5
NPHP3-208ENST00000490993 ZNF688P0C7X2 276 aa5.7□□□□□ -1.5
NPHP3-208ENST00000490993 IFI27P40305 119 aaPredicted RBP5.7□□□□□ -1.5
NPHP3-208ENST00000490993 SYNJ2BPP57105 145 aa5.7□□□□□ -1.5
NPHP3-208ENST00000490993 C5orf42Q9H799 3197 aa5.69□□□□□ -1.5
NPHP3-208ENST00000490993 DPM2O94777 84 aa5.69□□□□□ -1.5
NPHP3-208ENST00000490993 TNFRSF6BO95407 300 aa5.69□□□□□ -1.5
NPHP3-208ENST00000490993 NCR2O95944 276 aa5.69□□□□□ -1.5
NPHP3-208ENST00000490993 LGALS1P09382 135 aaKnown RBP5.69□□□□□ -1.5
NPHP3-208ENST00000490993 EGR2P11161 476 aaPredicted RBP5.69□□□□□ -1.5
NPHP3-208ENST00000490993 ASPHD1Q5U4P2 390 aa5.69□□□□□ -1.5
NPHP3-208ENST00000490993 ERASQ7Z444 233 aa5.69□□□□□ -1.5
NPHP3-208ENST00000490993 LINC00469Q8N7U9 141 aa5.69□□□□□ -1.5
NPHP3-208ENST00000490993 MBD6Q96DN6 1003 aa5.69□□□□□ -1.5
NPHP3-208ENST00000490993 AJUBAQ96IF1 538 aa5.69□□□□□ -1.5
NPHP3-208ENST00000490993 ANKHD1Q8IWZ3 2542 aaKnown RBP5.69□□□□□ -1.5
NPHP3-208ENST00000490993 J3QKU1 62 aa5.69□□□□□ -1.5
NPHP3-208ENST00000490993 EVI2AP22794 236 aa5.69□□□□□ -1.5
NPHP3-208ENST00000490993 C9orf47Q6ZRZ4 202 aa5.69□□□□□ -1.5
NPHP3-208ENST00000490993 LINC01587Q99440 93 aa5.69□□□□□ -1.5
NPHP3-208ENST00000490993 C2orf88Q9BSF0 95 aa5.69□□□□□ -1.5
NPHP3-208ENST00000490993 TNFRSF18Q9Y5U5 241 aa5.69□□□□□ -1.5
NPHP3-208ENST00000490993 GTSF1Q8WW33 167 aa5.69□□□□□ -1.5
NPHP3-208ENST00000490993 TMEM160Q9NX00 188 aa5.69□□□□□ -1.5
NPHP3-208ENST00000490993 CYSLTR1Q9Y271 337 aa5.69□□□□□ -1.5
NPHP3-208ENST00000490993 IGHV1-24A0A0C4DH33 117 aa5.69□□□□□ -1.5
NPHP3-208ENST00000490993 TMEM238LA0A1B0GVL6 79 aa5.69□□□□□ -1.5
NPHP3-208ENST00000490993 A6NJY4 79 aa5.69□□□□□ -1.5
NPHP3-208ENST00000490993 STHQ8IWL8 128 aa5.69□□□□□ -1.5
NPHP3-208ENST00000490993 Q8N8P6 123 aa5.69□□□□□ -1.5
NPHP3-208ENST00000490993 CCDC140Q96MF4 163 aa5.69□□□□□ -1.5
NPHP3-208ENST00000490993 RCHY1Q96PM5 261 aa5.69□□□□□ -1.5
NPHP3-208ENST00000490993 WDR87Q6ZQQ6 2873 aa5.68□□□□□ -1.5
NPHP3-208ENST00000490993 CD33P20138 364 aa5.68□□□□□ -1.5
NPHP3-208ENST00000490993 RRN3P1Q2M238 152 aa5.68□□□□□ -1.5
NPHP3-208ENST00000490993 KLK15Q9H2R5 256 aa5.68□□□□□ -1.5
NPHP3-208ENST00000490993 A0A1B0GXF2 115 aa5.68□□□□□ -1.5
NPHP3-208ENST00000490993 OR11H12B2RN74 326 aa5.68□□□□□ -1.5
NPHP3-208ENST00000490993 HOXA3O43365 443 aaPredicted RBP5.68□□□□□ -1.5
NPHP3-208ENST00000490993 IGKCP01834 107 aa5.68□□□□□ -1.5
NPHP3-208ENST00000490993 PF4P02776 101 aa5.68□□□□□ -1.5
NPHP3-208ENST00000490993 HLA-DMBP28068 263 aa5.68□□□□□ -1.5
NPHP3-208ENST00000490993 MAJINQ3KP22 176 aa5.68□□□□□ -1.5
NPHP3-208ENST00000490993 GPHB5Q86YW7 130 aa5.68□□□□□ -1.5
NPHP3-208ENST00000490993 OR11H1Q8NG94 326 aa5.68□□□□□ -1.5
NPHP3-208ENST00000490993 OR11H2Q8NH07 326 aa5.68□□□□□ -1.5
NPHP3-208ENST00000490993 HCFC1P51610 2035 aa5.68□□□□□ -1.5
NPHP3-208ENST00000490993 TRAV12-3A0A0B4J271 114 aa5.68□□□□□ -1.5
NPHP3-208ENST00000490993 BLCAPP62952 87 aa5.68□□□□□ -1.5
NPHP3-208ENST00000490993 MAPK1IP1LQ8NDC0 245 aa5.68□□□□□ -1.5
NPHP3-208ENST00000490993 KLHL30-AS1Q8NEE0 82 aa5.68□□□□□ -1.5
NPHP3-208ENST00000490993 PRB1P04280 392 aa5.68□□□□□ -1.5
NPHP3-208ENST00000490993 SRSF9Q13242 221 aaKnown RBP eCLIP5.68□□□□□ -1.5
NPHP3-208ENST00000490993 LCNL1Q6ZST4 164 aa5.68□□□□□ -1.5
NPHP3-208ENST00000490993 OR9G4Q8NGQ1 327 aa5.68□□□□□ -1.5
NPHP3-208ENST00000490993 MRPS16Q9Y3D3 137 aaKnown RBP5.67□□□□□ -1.5
NPHP3-208ENST00000490993 RAI1Q7Z5J4 1906 aaPredicted RBP5.67□□□□□ -1.5
NPHP3-208ENST00000490993 VCYO14598 125 aa5.67□□□□□ -1.5
NPHP3-208ENST00000490993 CTRLP40313 264 aa5.67□□□□□ -1.5
NPHP3-208ENST00000490993 ABCA4P78363 2273 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms