RNA–Protein interactions for RNA: ENST00000490831.1

COL27A1-206, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 3

Gene COL27A1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-206ENST00000490831 RGS21Q2M5E4 152 aa10.75□□□□□ -0.69
COL27A1-206ENST00000490831 ACOT6Q3I5F7 207 aaPredicted RBP10.75□□□□□ -0.69
COL27A1-206ENST00000490831 Q5BKY6 102 aa10.75□□□□□ -0.69
COL27A1-206ENST00000490831 OR2G3Q8NGZ4 309 aa10.75□□□□□ -0.69
COL27A1-206ENST00000490831 PYGO2Q9BRQ0 406 aa10.75□□□□□ -0.69
COL27A1-206ENST00000490831 LINC00467Q9BRT7 94 aa10.75□□□□□ -0.69
COL27A1-206ENST00000490831 IGKV2-40A0A087WW87 121 aaPredicted RBP10.74□□□□□ -0.69
COL27A1-206ENST00000490831 TRAV12-3A0A0B4J271 114 aa10.74□□□□□ -0.69
COL27A1-206ENST00000490831 TRBV7-9A0A0J9YWB2 115 aa10.74□□□□□ -0.69
COL27A1-206ENST00000490831 C7orf71A4D174 169 aa10.74□□□□□ -0.69
COL27A1-206ENST00000490831 RBAKDNA6NC62 111 aa10.74□□□□□ -0.69
COL27A1-206ENST00000490831 ZNF324O75467 553 aaPredicted RBP10.74□□□□□ -0.69
COL27A1-206ENST00000490831 IGKV2D-40P01614 121 aaPredicted RBP10.74□□□□□ -0.69
COL27A1-206ENST00000490831 HTN1P15515 57 aa10.74□□□□□ -0.69
COL27A1-206ENST00000490831 UBE2L3P68036 154 aaKnown RBP10.74□□□□□ -0.69
COL27A1-206ENST00000490831 FAM122CQ6P4D5 195 aa10.74□□□□□ -0.69
COL27A1-206ENST00000490831 LINC00612Q8N6U2 182 aa10.74□□□□□ -0.69
COL27A1-206ENST00000490831 VGLL1Q99990 258 aa10.74□□□□□ -0.69
COL27A1-206ENST00000490831 FRAS1Q86XX4 4008 aa10.74□□□□□ -0.69
COL27A1-206ENST00000490831 CBY3A6NI87 242 aa10.73□□□□□ -0.69
COL27A1-206ENST00000490831 DEFB130BP0DP73 79 aa10.73□□□□□ -0.69
COL27A1-206ENST00000490831 DEFB130AP0DP74 79 aa10.73□□□□□ -0.69
COL27A1-206ENST00000490831 HTN3P15516 51 aa10.73□□□□□ -0.69
COL27A1-206ENST00000490831 TMEM78Q5T7P6 136 aa10.73□□□□□ -0.69
COL27A1-206ENST00000490831 PQLC2Q6ZP29 291 aa10.73□□□□□ -0.69
COL27A1-206ENST00000490831 CCDC28AQ8IWP9 274 aa10.73□□□□□ -0.69
COL27A1-206ENST00000490831 ZFAND2AQ8N6M9 145 aa10.73□□□□□ -0.69
COL27A1-206ENST00000490831 POM121L12Q8N7R1 296 aa10.73□□□□□ -0.69
COL27A1-206ENST00000490831 PSMG3Q9BT73 122 aaPredicted RBP10.73□□□□□ -0.69
COL27A1-206ENST00000490831 Q9H3A6 140 aa10.73□□□□□ -0.69
COL27A1-206ENST00000490831 NOP10Q9NPE3 64 aaKnown RBP10.73□□□□□ -0.69
COL27A1-206ENST00000490831 ZNF492Q9P255 531 aa10.73□□□□□ -0.69
COL27A1-206ENST00000490831 J3KRW8 73 aa10.72□□□□□ -0.69
COL27A1-206ENST00000490831 RAB2AP61019 212 aa10.72□□□□□ -0.69
COL27A1-206ENST00000490831 RANP62826 216 aaKnown RBP10.72□□□□□ -0.69
COL27A1-206ENST00000490831 TMEM88Q6PEY1 159 aa10.72□□□□□ -0.69
COL27A1-206ENST00000490831 A0A1W2PPV4 95 aa10.71□□□□□ -0.69
COL27A1-206ENST00000490831 RNF222A6NCQ9 220 aa10.71□□□□□ -0.69
COL27A1-206ENST00000490831 ATP5G1P05496 136 aa10.71□□□□□ -0.69
COL27A1-206ENST00000490831 CSN1S1P47710 185 aa10.71□□□□□ -0.69
COL27A1-206ENST00000490831 ATP5G3P48201 142 aa10.71□□□□□ -0.69
COL27A1-206ENST00000490831 ZNF138P52744 262 aa10.71□□□□□ -0.69
COL27A1-206ENST00000490831 SERF2P84101 59 aa10.71□□□□□ -0.69
COL27A1-206ENST00000490831 CD300CQ08708 224 aa10.71□□□□□ -0.69
COL27A1-206ENST00000490831 DAZ2Q13117 558 aaKnown RBP10.71□□□□□ -0.69
COL27A1-206ENST00000490831 BTN1A1Q13410 526 aa10.71□□□□□ -0.69
COL27A1-206ENST00000490831 ANXA2RQ3ZCQ2 193 aa10.71□□□□□ -0.69
COL27A1-206ENST00000490831 ARL6IP6Q8N6S5 226 aa10.71□□□□□ -0.69
COL27A1-206ENST00000490831 C15orf53Q8NAA6 179 aa10.71□□□□□ -0.69
COL27A1-206ENST00000490831 OR10G4Q8NGN3 311 aa10.71□□□□□ -0.69
COL27A1-206ENST00000490831 OR10G9Q8NGN4 311 aa10.71□□□□□ -0.69
COL27A1-206ENST00000490831 OR10G7Q8NGN6 311 aa10.71□□□□□ -0.69
COL27A1-206ENST00000490831 TNFSF18Q9UNG2 199 aa10.71□□□□□ -0.69
COL27A1-206ENST00000490831 DIRC3C9JPN6 131 aa10.7□□□□□ -0.7
COL27A1-206ENST00000490831 G3V3Q6 166 aa10.7□□□□□ -0.7
COL27A1-206ENST00000490831 GPX1P07203 203 aa10.7□□□□□ -0.7
COL27A1-206ENST00000490831 ATP6V0CP27449 155 aa10.7□□□□□ -0.7
COL27A1-206ENST00000490831 PRR9Q5T870 116 aa10.7□□□□□ -0.7
COL27A1-206ENST00000490831 HSD17B11Q8NBQ5 300 aa10.7□□□□□ -0.7
COL27A1-206ENST00000490831 INO80EQ8NBZ0 244 aaPredicted RBP10.7□□□□□ -0.7
COL27A1-206ENST00000490831 OR2T35Q8NGX2 323 aa10.7□□□□□ -0.7
COL27A1-206ENST00000490831 RXFP4Q8TDU9 374 aa10.7□□□□□ -0.7
COL27A1-206ENST00000490831 OTORQ9NRC9 128 aa10.7□□□□□ -0.7
COL27A1-206ENST00000490831 LENEPQ9Y5L5 61 aa10.7□□□□□ -0.7
COL27A1-206ENST00000490831 SNURFLB1AK76 121 aa10.69□□□□□ -0.7
COL27A1-206ENST00000490831 EIF3GO75821 320 aaKnown RBP eCLIP10.69□□□□□ -0.7
COL27A1-206ENST00000490831 RNASE4P34096 147 aaKnown RBP10.69□□□□□ -0.7
COL27A1-206ENST00000490831 RNF212Q495C1 297 aa10.69□□□□□ -0.7
COL27A1-206ENST00000490831 EIF4E3Q8N5X7 224 aaKnown RBP10.69□□□□□ -0.7
COL27A1-206ENST00000490831 C11orf72Q8NBR9 251 aa10.69□□□□□ -0.7
COL27A1-206ENST00000490831 ZNF680Q8NEM1 530 aa10.69□□□□□ -0.7
COL27A1-206ENST00000490831 SUN5Q8TC36 379 aa10.69□□□□□ -0.7
COL27A1-206ENST00000490831 TMED6Q8WW62 240 aa10.69□□□□□ -0.7
COL27A1-206ENST00000490831 MBP02144 154 aa10.68□□□□□ -0.7
COL27A1-206ENST00000490831 STAG3L2P0CL84 134 aa10.68□□□□□ -0.7
COL27A1-206ENST00000490831 STAG3L3P0CL85 134 aa10.68□□□□□ -0.7
COL27A1-206ENST00000490831 CDC34P49427 236 aaPredicted RBP10.68□□□□□ -0.7
COL27A1-206ENST00000490831 Q8TAT8 98 aa10.68□□□□□ -0.7
COL27A1-206ENST00000490831 FXYD6-FXYD2A0A087WZ82 144 aa10.67□□□□□ -0.7
COL27A1-206ENST00000490831 PGPA6NDG6 321 aa10.67□□□□□ -0.7
COL27A1-206ENST00000490831 F5H768 121 aa10.67□□□□□ -0.7
COL27A1-206ENST00000490831 FAM74A1Q5RGS3 127 aa10.67□□□□□ -0.7
COL27A1-206ENST00000490831 IBA57Q5T440 356 aaKnown RBP10.67□□□□□ -0.7
COL27A1-206ENST00000490831 RAB24Q969Q5 203 aa10.67□□□□□ -0.7
COL27A1-206ENST00000490831 GNPNAT1Q96EK6 184 aaPredicted RBP10.67□□□□□ -0.7
COL27A1-206ENST00000490831 C18orf15Q96N68 181 aa10.67□□□□□ -0.7
COL27A1-206ENST00000490831 SH3BGRL3Q9H299 93 aa10.67□□□□□ -0.7
COL27A1-206ENST00000490831 ARL14EPLP0DKL9 152 aa10.66□□□□□ -0.7
COL27A1-206ENST00000490831 TCL1AP56279 114 aa10.66□□□□□ -0.7
COL27A1-206ENST00000490831 Q6AWC8 147 aa10.66□□□□□ -0.7
COL27A1-206ENST00000490831 RPL7L1Q6DKI1 246 aaKnown RBP10.66□□□□□ -0.7
COL27A1-206ENST00000490831 GSN-AS1Q9NRJ2 163 aa10.66□□□□□ -0.7
COL27A1-206ENST00000490831 IGHV1OR15-1A0A075B7D0 117 aa10.65□□□□□ -0.7
COL27A1-206ENST00000490831 BORCS7-ASMTA0A0B4J1R7 106 aa10.65□□□□□ -0.7
COL27A1-206ENST00000490831 GAGE12BA1L429 117 aa10.65□□□□□ -0.7
COL27A1-206ENST00000490831 HMGB3O15347 200 aaKnown RBP10.65□□□□□ -0.7
COL27A1-206ENST00000490831 GAGE7O76087 117 aa10.65□□□□□ -0.7
COL27A1-206ENST00000490831 GAGE12FP0CL80 117 aa10.65□□□□□ -0.7
COL27A1-206ENST00000490831 GAGE12GP0CL81 117 aa10.65□□□□□ -0.7
COL27A1-206ENST00000490831 GAGE12IP0CL82 117 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms