RNA–Protein interactions for RNA: ENST00000490690.1

SHROOM3-209, Transcript of shroom family member 3, humanhuman

TSL 4

Gene SHROOM3, Length 504 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-209ENST00000490690 ZNF138P52744 262 aa14.56□□□□□ -0.08
SHROOM3-209ENST00000490690 DEFB1P60022 68 aa14.56□□□□□ -0.08
SHROOM3-209ENST00000490690 C20orf144Q9BQM9 153 aa14.56□□□□□ -0.08
SHROOM3-209ENST00000490690 NDFIP1Q9BT67 221 aa14.56□□□□□ -0.08
SHROOM3-209ENST00000490690 GNG13Q9P2W3 67 aa14.56□□□□□ -0.08
SHROOM3-209ENST00000490690 YTHDF2Q9Y5A9 579 aaKnown RBP14.56□□□□□ -0.08
SHROOM3-209ENST00000490690 INSP01308 110 aa14.55□□□□□ -0.08
SHROOM3-209ENST00000490690 AMTNQ6UX39 209 aa14.55□□□□□ -0.08
SHROOM3-209ENST00000490690 GOLT1AQ6ZVE7 132 aa14.55□□□□□ -0.08
SHROOM3-209ENST00000490690 LYPD6BQ8NI32 183 aa14.55□□□□□ -0.08
SHROOM3-209ENST00000490690 RPH3ALQ9UNE2 315 aa14.55□□□□□ -0.08
SHROOM3-209ENST00000490690 GOLT1BQ9Y3E0 138 aa14.55□□□□□ -0.08
SHROOM3-209ENST00000490690 IGKV2-40A0A087WW87 121 aaPredicted RBP14.54□□□□□ -0.08
SHROOM3-209ENST00000490690 C11orf94C9JXX5 98 aa14.54□□□□□ -0.08
SHROOM3-209ENST00000490690 SPRY2O43597 315 aa14.54□□□□□ -0.08
SHROOM3-209ENST00000490690 IGKV2D-40P01614 121 aaPredicted RBP14.54□□□□□ -0.08
SHROOM3-209ENST00000490690 S100A9P06702 114 aaKnown RBP14.54□□□□□ -0.08
SHROOM3-209ENST00000490690 ZNF705DP0CH99 300 aaPredicted RBP14.54□□□□□ -0.08
SHROOM3-209ENST00000490690 ZNF705BP0CI00 300 aaPredicted RBP14.54□□□□□ -0.08
SHROOM3-209ENST00000490690 RAB14P61106 215 aa14.54□□□□□ -0.08
SHROOM3-209ENST00000490690 ZNF767PQ75MW2 155 aa14.54□□□□□ -0.08
SHROOM3-209ENST00000490690 TMEM75Q8N9X5 138 aa14.54□□□□□ -0.08
SHROOM3-209ENST00000490690 RNF183Q96D59 192 aa14.54□□□□□ -0.08
SHROOM3-209ENST00000490690 IGF2BP2-AS1Q96M15 143 aa14.54□□□□□ -0.08
SHROOM3-209ENST00000490690 ZNF492Q9P255 531 aa14.54□□□□□ -0.08
SHROOM3-209ENST00000490690 PEX7O00628 323 aa14.53□□□□□ -0.08
SHROOM3-209ENST00000490690 PDE6DO43924 150 aa14.53□□□□□ -0.08
SHROOM3-209ENST00000490690 CCDC28AQ8IWP9 274 aa14.53□□□□□ -0.08
SHROOM3-209ENST00000490690 TMEM256Q8N2U0 113 aa14.53□□□□□ -0.08
SHROOM3-209ENST00000490690 ASCL2Q99929 193 aa14.53□□□□□ -0.08
SHROOM3-209ENST00000490690 AGPAT4-IT1Q9H0P7 198 aa14.53□□□□□ -0.08
SHROOM3-209ENST00000490690 SLC35B3Q9H1N7 401 aa14.53□□□□□ -0.08
SHROOM3-209ENST00000490690 BCL2P10415 239 aa14.52□□□□□ -0.09
SHROOM3-209ENST00000490690 CRISP2P16562 243 aa14.52□□□□□ -0.09
SHROOM3-209ENST00000490690 DEFB135Q30KP9 77 aa14.52□□□□□ -0.09
SHROOM3-209ENST00000490690 XCL2Q9UBD3 114 aa14.52□□□□□ -0.09
SHROOM3-209ENST00000490690 VAX2Q9UIW0 290 aa14.52□□□□□ -0.09
SHROOM3-209ENST00000490690 CT45A10P0DMU9 189 aa14.51□□□□□ -0.09
SHROOM3-209ENST00000490690 UBE2G1P62253 170 aa14.51□□□□□ -0.09
SHROOM3-209ENST00000490690 MEF2BQ02080 365 aaPredicted RBP14.51□□□□□ -0.09
SHROOM3-209ENST00000490690 SPINK13Q1W4C9 94 aa14.51□□□□□ -0.09
SHROOM3-209ENST00000490690 SAPCD1Q5SSQ6 148 aa14.51□□□□□ -0.09
SHROOM3-209ENST00000490690 FMC1Q96HJ9 113 aa14.51□□□□□ -0.09
SHROOM3-209ENST00000490690 VGLL1Q99990 258 aa14.51□□□□□ -0.09
SHROOM3-209ENST00000490690 NDUFS6O75380 124 aaKnown RBP14.5□□□□□ -0.09
SHROOM3-209ENST00000490690 AKR1C3P42330 323 aa14.5□□□□□ -0.09
SHROOM3-209ENST00000490690 GNG5P63218 68 aa14.5□□□□□ -0.09
SHROOM3-209ENST00000490690 CCL20P78556 96 aa14.5□□□□□ -0.09
SHROOM3-209ENST00000490690 FLI1Q01543 452 aaPredicted RBP14.5□□□□□ -0.09
SHROOM3-209ENST00000490690 ERCC8Q13216 396 aa14.5□□□□□ -0.09
SHROOM3-209ENST00000490690 TMEM208Q9BTX3 173 aa14.5□□□□□ -0.09
SHROOM3-209ENST00000490690 SMIM9A6NGZ8 99 aa14.49□□□□□ -0.09
SHROOM3-209ENST00000490690 M0R2Z0 102 aa14.49□□□□□ -0.09
SHROOM3-209ENST00000490690 GPX1P07203 203 aa14.49□□□□□ -0.09
SHROOM3-209ENST00000490690 GIG44P09565 113 aaPredicted RBP14.49□□□□□ -0.09
SHROOM3-209ENST00000490690 ATP5G3P48201 142 aa14.49□□□□□ -0.09
SHROOM3-209ENST00000490690 CSNK1G2-AS1Q8NCQ2 148 aa14.49□□□□□ -0.09
SHROOM3-209ENST00000490690 FAM19A4Q96LR4 140 aa14.49□□□□□ -0.09
SHROOM3-209ENST00000490690 RARRES2Q99969 163 aa14.49□□□□□ -0.09
SHROOM3-209ENST00000490690 NIPSNAP3BQ9BS92 247 aa14.49□□□□□ -0.09
SHROOM3-209ENST00000490690 TRBV6-1A0A0K0K1D8 114 aa14.48□□□□□ -0.09
SHROOM3-209ENST00000490690 KLLNB2CW77 178 aa14.48□□□□□ -0.09
SHROOM3-209ENST00000490690 NEU1Q99519 415 aa14.48□□□□□ -0.09
SHROOM3-209ENST00000490690 OVOL2Q9BRP0 275 aa14.48□□□□□ -0.09
SHROOM3-209ENST00000490690 PSG8Q9UQ74 426 aa14.48□□□□□ -0.09
SHROOM3-209ENST00000490690 ZFP30Q9Y2G7 519 aa14.48□□□□□ -0.09
SHROOM3-209ENST00000490690 AGRNO00468 2067 aa14.47□□□□□ -0.09
SHROOM3-209ENST00000490690 H7BYZ3 331 aa14.47□□□□□ -0.09
SHROOM3-209ENST00000490690 MIFP14174 115 aa14.47□□□□□ -0.09
SHROOM3-209ENST00000490690 FXYD7P58549 80 aa14.47□□□□□ -0.09
SHROOM3-209ENST00000490690 TREM1Q9NP99 234 aa14.47□□□□□ -0.09
SHROOM3-209ENST00000490690 KLF12Q9Y4X4 402 aa14.47□□□□□ -0.09
SHROOM3-209ENST00000490690 U3KQK5 164 aa14.47□□□□□ -0.09
SHROOM3-209ENST00000490690 LOC102723971A0A1B0GUV8 181 aa14.46□□□□□ -0.09
SHROOM3-209ENST00000490690 C7orf71A4D174 169 aa14.46□□□□□ -0.09
SHROOM3-209ENST00000490690 RBFOX3A6NFN3 312 aa14.46□□□□□ -0.09
SHROOM3-209ENST00000490690 TMEM183BQ1AE95 376 aa14.46□□□□□ -0.09
SHROOM3-209ENST00000490690 ZNF705AQ6ZN79 300 aaPredicted RBP14.46□□□□□ -0.09
SHROOM3-209ENST00000490690 OR11H2Q8NH07 326 aa14.46□□□□□ -0.09
SHROOM3-209ENST00000490690 C11orf52Q96A22 123 aa14.46□□□□□ -0.09
SHROOM3-209ENST00000490690 CRXO43186 299 aaPredicted RBP14.45□□□□□ -0.1
SHROOM3-209ENST00000490690 GFI1BQ5VTD9 330 aa14.45□□□□□ -0.1
SHROOM3-209ENST00000490690 Q8TAT8 98 aa14.45□□□□□ -0.1
SHROOM3-209ENST00000490690 FAM210AQ96ND0 272 aa14.45□□□□□ -0.1
SHROOM3-209ENST00000490690 EIF5A2Q9GZV4 153 aaKnown RBP14.45□□□□□ -0.1
SHROOM3-209ENST00000490690 SMDT1Q9H4I9 107 aa14.45□□□□□ -0.1
SHROOM3-209ENST00000490690 TRAV12-2A0A075B6T6 113 aa14.44□□□□□ -0.1
SHROOM3-209ENST00000490690 TRAV8-1A0A0A6YYK1 113 aa14.44□□□□□ -0.1
SHROOM3-209ENST00000490690 TMEM189A5PLL7 270 aa14.44□□□□□ -0.1
SHROOM3-209ENST00000490690 TMEM250H0YL14 139 aa14.44□□□□□ -0.1
SHROOM3-209ENST00000490690 TAS2R60P59551 318 aa14.44□□□□□ -0.1
SHROOM3-209ENST00000490690 SMUG1Q53HV7 270 aa14.44□□□□□ -0.1
SHROOM3-209ENST00000490690 ZNF506Q5JVG8 444 aa14.44□□□□□ -0.1
SHROOM3-209ENST00000490690 PRNTQ86SH4 94 aa14.44□□□□□ -0.1
SHROOM3-209ENST00000490690 ZFAND2AQ8N6M9 145 aa14.44□□□□□ -0.1
SHROOM3-209ENST00000490690 C2CD4CQ8TF44 421 aa14.44□□□□□ -0.1
SHROOM3-209ENST00000490690 PYGO2Q9BRQ0 406 aa14.44□□□□□ -0.1
SHROOM3-209ENST00000490690 PRKDCP78527 4128 aaKnown RBP14.44□□□□□ -0.1
SHROOM3-209ENST00000490690 SCO2A0A1W2PP80 73 aa14.43□□□□□ -0.1
SHROOM3-209ENST00000490690 RRN3P1Q2M238 152 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms