RNA–Protein interactions for RNA: ENST00000490387.1

RAPGEF3-212, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 5

Gene RAPGEF3, Length 699 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-212ENST00000490387 CMTM2Q8TAZ6 248 aa12.46□□□□□ -0.41
RAPGEF3-212ENST00000490387 VGLL1Q99990 258 aa12.46□□□□□ -0.41
RAPGEF3-212ENST00000490387 RYR3Q15413 4870 aa12.45□□□□□ -0.42
RAPGEF3-212ENST00000490387 UBE2CO00762 179 aa12.45□□□□□ -0.42
RAPGEF3-212ENST00000490387 TCRAP04437 139 aa12.45□□□□□ -0.42
RAPGEF3-212ENST00000490387 ERCC8Q13216 396 aa12.45□□□□□ -0.42
RAPGEF3-212ENST00000490387 ODF3Q96PU9 254 aa12.45□□□□□ -0.42
RAPGEF3-212ENST00000490387 AGPAT4-IT1Q9H0P7 198 aa12.45□□□□□ -0.42
RAPGEF3-212ENST00000490387 SLC35B3Q9H1N7 401 aa12.45□□□□□ -0.42
RAPGEF3-212ENST00000490387 MANBALQ9NQG1 85 aa12.45□□□□□ -0.42
RAPGEF3-212ENST00000490387 EPDR1Q9UM22 224 aa12.45□□□□□ -0.42
RAPGEF3-212ENST00000490387 CT45A10P0DMU9 189 aa12.44□□□□□ -0.42
RAPGEF3-212ENST00000490387 ATP5G3P48201 142 aa12.44□□□□□ -0.42
RAPGEF3-212ENST00000490387 IFITM2Q01629 132 aa12.44□□□□□ -0.42
RAPGEF3-212ENST00000490387 FAM19A4Q96LR4 140 aa12.44□□□□□ -0.42
RAPGEF3-212ENST00000490387 LINC00477Q96M19 166 aa12.44□□□□□ -0.42
RAPGEF3-212ENST00000490387 GNG13Q9P2W3 67 aa12.44□□□□□ -0.42
RAPGEF3-212ENST00000490387 SERTM2A0A1B0GWG4 89 aa12.43□□□□□ -0.42
RAPGEF3-212ENST00000490387 CA1P00915 261 aaPredicted RBP12.43□□□□□ -0.42
RAPGEF3-212ENST00000490387 NMBP08949 121 aa12.43□□□□□ -0.42
RAPGEF3-212ENST00000490387 NUTF2P61970 127 aaKnown RBP12.43□□□□□ -0.42
RAPGEF3-212ENST00000490387 CST9LP1Q5W188 147 aa12.43□□□□□ -0.42
RAPGEF3-212ENST00000490387 GOLT1AQ6ZVE7 132 aa12.43□□□□□ -0.42
RAPGEF3-212ENST00000490387 Q6ZWC4 215 aa12.43□□□□□ -0.42
RAPGEF3-212ENST00000490387 CSNK1G2-AS1Q8NCQ2 148 aa12.43□□□□□ -0.42
RAPGEF3-212ENST00000490387 TCEAL7Q9BRU2 100 aa12.43□□□□□ -0.42
RAPGEF3-212ENST00000490387 ATG101Q9BSB4 218 aa12.43□□□□□ -0.42
RAPGEF3-212ENST00000490387 PPP1R14DQ9NXH3 145 aa12.43□□□□□ -0.42
RAPGEF3-212ENST00000490387 CRXO43186 299 aaPredicted RBP12.42□□□□□ -0.42
RAPGEF3-212ENST00000490387 IGLV2-11P01706 119 aa12.42□□□□□ -0.42
RAPGEF3-212ENST00000490387 CYB561D1Q8N8Q1 229 aa12.42□□□□□ -0.42
RAPGEF3-212ENST00000490387 ZNF492Q9P255 531 aa12.42□□□□□ -0.42
RAPGEF3-212ENST00000490387 RPH3ALQ9UNE2 315 aa12.42□□□□□ -0.42
RAPGEF3-212ENST00000490387 TRAV8-1A0A0A6YYK1 113 aa12.41□□□□□ -0.42
RAPGEF3-212ENST00000490387 M0R2Z0 102 aa12.41□□□□□ -0.42
RAPGEF3-212ENST00000490387 PEX7O00628 323 aa12.41□□□□□ -0.42
RAPGEF3-212ENST00000490387 BCL2P10415 239 aa12.41□□□□□ -0.42
RAPGEF3-212ENST00000490387 FXYD7P58549 80 aa12.41□□□□□ -0.42
RAPGEF3-212ENST00000490387 SPINK13Q1W4C9 94 aa12.41□□□□□ -0.42
RAPGEF3-212ENST00000490387 TMEM78Q5T7P6 136 aa12.41□□□□□ -0.42
RAPGEF3-212ENST00000490387 PCNPQ8WW12 178 aaKnown RBP12.41□□□□□ -0.42
RAPGEF3-212ENST00000490387 HIST1H2BAQ96A08 127 aa12.41□□□□□ -0.42
RAPGEF3-212ENST00000490387 C1QTNF4Q9BXJ3 329 aa12.41□□□□□ -0.42
RAPGEF3-212ENST00000490387 CSMD3Q7Z407 3707 aa12.4□□□□□ -0.42
RAPGEF3-212ENST00000490387 TRBV7-9A0A0J9YWB2 115 aa12.4□□□□□ -0.42
RAPGEF3-212ENST00000490387 C11orf94C9JXX5 98 aa12.4□□□□□ -0.42
RAPGEF3-212ENST00000490387 AMBPP02760 352 aa12.4□□□□□ -0.42
RAPGEF3-212ENST00000490387 CRISP2P16562 243 aa12.4□□□□□ -0.42
RAPGEF3-212ENST00000490387 ZNF138P52744 262 aa12.4□□□□□ -0.42
RAPGEF3-212ENST00000490387 DEFB135Q30KP9 77 aa12.4□□□□□ -0.42
RAPGEF3-212ENST00000490387 Q8TAT8 98 aa12.4□□□□□ -0.42
RAPGEF3-212ENST00000490387 RNF183Q96D59 192 aa12.4□□□□□ -0.42
RAPGEF3-212ENST00000490387 TXNDC17Q9BRA2 123 aa12.4□□□□□ -0.42
RAPGEF3-212ENST00000490387 XCL2Q9UBD3 114 aa12.4□□□□□ -0.42
RAPGEF3-212ENST00000490387 TP53TG1Q9Y2A0 90 aa12.4□□□□□ -0.42
RAPGEF3-212ENST00000490387 TENM2Q9NT68 2774 aa12.4□□□□□ -0.43
RAPGEF3-212ENST00000490387 LOC102723971A0A1B0GUV8 181 aa12.39□□□□□ -0.43
RAPGEF3-212ENST00000490387 KLLNB2CW77 178 aa12.39□□□□□ -0.43
RAPGEF3-212ENST00000490387 IFNA1P01562 189 aa12.39□□□□□ -0.43
RAPGEF3-212ENST00000490387 TAGLN2P37802 199 aaKnown RBP12.39□□□□□ -0.43
RAPGEF3-212ENST00000490387 CDKN1BP46527 198 aa12.39□□□□□ -0.43
RAPGEF3-212ENST00000490387 KIR3DS1Q14943 382 aa12.39□□□□□ -0.43
RAPGEF3-212ENST00000490387 ZNF767PQ75MW2 155 aa12.39□□□□□ -0.43
RAPGEF3-212ENST00000490387 ZFAND2AQ8N6M9 145 aa12.39□□□□□ -0.43
RAPGEF3-212ENST00000490387 TMEM75Q8N9X5 138 aa12.39□□□□□ -0.43
RAPGEF3-212ENST00000490387 IL17DQ8TAD2 202 aa12.39□□□□□ -0.43
RAPGEF3-212ENST00000490387 C2CD4CQ8TF44 421 aa12.39□□□□□ -0.43
RAPGEF3-212ENST00000490387 OVOL2Q9BRP0 275 aa12.39□□□□□ -0.43
RAPGEF3-212ENST00000490387 KLF12Q9Y4X4 402 aa12.39□□□□□ -0.43
RAPGEF3-212ENST00000490387 LENEPQ9Y5L5 61 aa12.39□□□□□ -0.43
RAPGEF3-212ENST00000490387 LCE6AA0A183 80 aa12.38□□□□□ -0.43
RAPGEF3-212ENST00000490387 K7EQM0 130 aa12.38□□□□□ -0.43
RAPGEF3-212ENST00000490387 TSPOP30536 169 aa12.38□□□□□ -0.43
RAPGEF3-212ENST00000490387 LEPP41159 167 aa12.38□□□□□ -0.43
RAPGEF3-212ENST00000490387 MEF2BQ02080 365 aaPredicted RBP12.38□□□□□ -0.43
RAPGEF3-212ENST00000490387 C11orf52Q96A22 123 aa12.38□□□□□ -0.43
RAPGEF3-212ENST00000490387 TVP23CQ96ET8 276 aa12.38□□□□□ -0.43
RAPGEF3-212ENST00000490387 IGF2BP2-AS1Q96M15 143 aa12.38□□□□□ -0.43
RAPGEF3-212ENST00000490387 LINC00479Q96M42 142 aa12.38□□□□□ -0.43
RAPGEF3-212ENST00000490387 VAX2Q9UIW0 290 aa12.38□□□□□ -0.43
RAPGEF3-212ENST00000490387 DYNC2H1Q8NCM8 4307 aaKnown RBP12.38□□□□□ -0.43
RAPGEF3-212ENST00000490387 STARD9Q9P2P6 4700 aa12.37□□□□□ -0.43
RAPGEF3-212ENST00000490387 TRAV12-2A0A075B6T6 113 aa12.37□□□□□ -0.43
RAPGEF3-212ENST00000490387 SCO2A0A1W2PP80 73 aa12.37□□□□□ -0.43
RAPGEF3-212ENST00000490387 FBLL1A6NHQ2 334 aaKnown RBP12.37□□□□□ -0.43
RAPGEF3-212ENST00000490387 SPRY2O43597 315 aa12.37□□□□□ -0.43
RAPGEF3-212ENST00000490387 RBMY1A1P0DJD3 496 aaKnown RBP12.37□□□□□ -0.43
RAPGEF3-212ENST00000490387 RBMY1CP0DJD4 496 aa12.37□□□□□ -0.43
RAPGEF3-212ENST00000490387 FLI1Q01543 452 aaPredicted RBP12.37□□□□□ -0.43
RAPGEF3-212ENST00000490387 RBMY1FQ15415 496 aaKnown RBP12.37□□□□□ -0.43
RAPGEF3-212ENST00000490387 ZNF705AQ6ZN79 300 aaPredicted RBP12.37□□□□□ -0.43
RAPGEF3-212ENST00000490387 SGK494Q96LW2 274 aa12.37□□□□□ -0.43
RAPGEF3-212ENST00000490387 RARRES2Q99969 163 aa12.37□□□□□ -0.43
RAPGEF3-212ENST00000490387 TRAV34A0A0B4J273 112 aa12.36□□□□□ -0.43
RAPGEF3-212ENST00000490387 F6UZH7 168 aa12.36□□□□□ -0.43
RAPGEF3-212ENST00000490387 ZNF506Q5JVG8 444 aa12.36□□□□□ -0.43
RAPGEF3-212ENST00000490387 PRR9Q5T870 116 aa12.36□□□□□ -0.43
RAPGEF3-212ENST00000490387 GFI1BQ5VTD9 330 aa12.36□□□□□ -0.43
RAPGEF3-212ENST00000490387 C1orf158Q8N1D5 194 aa12.36□□□□□ -0.43
RAPGEF3-212ENST00000490387 FAM210AQ96ND0 272 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms