RNA–Protein interactions for RNA: ENST00000490360.1

UPK3B-205, Transcript of uroplakin 3B, humanhuman

TSL 2

Gene UPK3B, Length 524 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-205ENST00000490360 DNAJC4Q9NNZ3 241 aa13.27□□□□□ -0.29
UPK3B-205ENST00000490360 PRELID1Q9Y255 219 aa13.27□□□□□ -0.29
UPK3B-205ENST00000490360 BOLA1Q9Y3E2 137 aa13.27□□□□□ -0.29
UPK3B-205ENST00000490360 TSC22D2O75157 780 aa13.26□□□□□ -0.29
UPK3B-205ENST00000490360 ORM1P02763 201 aa13.26□□□□□ -0.29
UPK3B-205ENST00000490360 RAB31Q13636 194 aa13.26□□□□□ -0.29
UPK3B-205ENST00000490360 SPCS2Q15005 226 aa13.26□□□□□ -0.29
UPK3B-205ENST00000490360 Q6ZRG5 221 aa13.26□□□□□ -0.29
UPK3B-205ENST00000490360 TOMM5Q8N4H5 51 aa13.26□□□□□ -0.29
UPK3B-205ENST00000490360 MCFD2Q8NI22 146 aa13.26□□□□□ -0.29
UPK3B-205ENST00000490360 FAM19A4Q96LR4 140 aa13.26□□□□□ -0.29
UPK3B-205ENST00000490360 TRGV4A0A0C4DH28 118 aa13.25□□□□□ -0.29
UPK3B-205ENST00000490360 K7EQD1 137 aa13.25□□□□□ -0.29
UPK3B-205ENST00000490360 RGS13O14921 159 aa13.25□□□□□ -0.29
UPK3B-205ENST00000490360 CCNKO75909 580 aa13.25□□□□□ -0.29
UPK3B-205ENST00000490360 GPX1P07203 203 aa13.25□□□□□ -0.29
UPK3B-205ENST00000490360 CRISP2P16562 243 aa13.25□□□□□ -0.29
UPK3B-205ENST00000490360 RNASE4P34096 147 aaKnown RBP13.25□□□□□ -0.29
UPK3B-205ENST00000490360 CD300CQ08708 224 aa13.25□□□□□ -0.29
UPK3B-205ENST00000490360 MORN5Q5VZ52 161 aa13.25□□□□□ -0.29
UPK3B-205ENST00000490360 ARPC5LQ9BPX5 153 aa13.25□□□□□ -0.29
UPK3B-205ENST00000490360 TXNDC17Q9BRA2 123 aa13.25□□□□□ -0.29
UPK3B-205ENST00000490360 TRAV5A0A0B4J249 113 aa13.24□□□□□ -0.29
UPK3B-205ENST00000490360 LRCOL1A6NCL2 159 aa13.24□□□□□ -0.29
UPK3B-205ENST00000490360 ZNF415Q09FC8 603 aa13.24□□□□□ -0.29
UPK3B-205ENST00000490360 BTN1A1Q13410 526 aa13.24□□□□□ -0.29
UPK3B-205ENST00000490360 C12orf45Q8N5I9 185 aaPredicted RBP13.24□□□□□ -0.29
UPK3B-205ENST00000490360 OR1L4Q8NGR5 311 aa13.24□□□□□ -0.29
UPK3B-205ENST00000490360 PFDN5Q99471 154 aa13.24□□□□□ -0.29
UPK3B-205ENST00000490360 MRPL16Q9NX20 251 aaKnown RBP13.24□□□□□ -0.29
UPK3B-205ENST00000490360 E5RGE8 158 aa13.23□□□□□ -0.29
UPK3B-205ENST00000490360 TNFSF8P32971 234 aa13.23□□□□□ -0.29
UPK3B-205ENST00000490360 SH2D6Q7Z4S9 175 aa13.23□□□□□ -0.29
UPK3B-205ENST00000490360 Q8N814 137 aa13.23□□□□□ -0.29
UPK3B-205ENST00000490360 DYNC2LI1Q8TCX1 351 aa13.23□□□□□ -0.29
UPK3B-205ENST00000490360 MGST2Q99735 147 aa13.23□□□□□ -0.29
UPK3B-205ENST00000490360 IGHV1OR15-1A0A075B7D0 117 aa13.22□□□□□ -0.29
UPK3B-205ENST00000490360 ERCC8Q13216 396 aa13.22□□□□□ -0.29
UPK3B-205ENST00000490360 PDE6HQ13956 83 aa13.22□□□□□ -0.29
UPK3B-205ENST00000490360 C9orf47Q6ZRZ4 202 aa13.22□□□□□ -0.29
UPK3B-205ENST00000490360 TRIM63Q969Q1 353 aa13.22□□□□□ -0.29
UPK3B-205ENST00000490360 AGPAT4-IT1Q9H0P7 198 aa13.22□□□□□ -0.29
UPK3B-205ENST00000490360 TRBV19A0A075B6N1 114 aa13.21□□□□□ -0.29
UPK3B-205ENST00000490360 C9orf170A2RU37 121 aa13.21□□□□□ -0.29
UPK3B-205ENST00000490360 C9JCJ5 164 aa13.21□□□□□ -0.29
UPK3B-205ENST00000490360 SMIM18P0DKX4 95 aa13.21□□□□□ -0.29
UPK3B-205ENST00000490360 HIST1H1EP10412 219 aaKnown RBP13.21□□□□□ -0.29
UPK3B-205ENST00000490360 GYPEP15421 78 aa13.21□□□□□ -0.29
UPK3B-205ENST00000490360 CAMLGP49069 296 aa13.21□□□□□ -0.29
UPK3B-205ENST00000490360 RAB2BQ8WUD1 216 aa13.21□□□□□ -0.29
UPK3B-205ENST00000490360 BCL7BQ9BQE9 202 aa13.21□□□□□ -0.29
UPK3B-205ENST00000490360 M0R3E3 92 aa13.2□□□□□ -0.3
UPK3B-205ENST00000490360 TMEM78Q5T7P6 136 aa13.2□□□□□ -0.3
UPK3B-205ENST00000490360 OR10G4Q8NGN3 311 aa13.2□□□□□ -0.3
UPK3B-205ENST00000490360 SRRQ9GZT4 340 aa13.2□□□□□ -0.3
UPK3B-205ENST00000490360 FAM30AQ9NZY2 134 aa13.2□□□□□ -0.3
UPK3B-205ENST00000490360 TP53TG3Q9ULZ0 132 aa13.2□□□□□ -0.3
UPK3B-205ENST00000490360 RCL1Q9Y2P8 373 aaKnown RBP13.2□□□□□ -0.3
UPK3B-205ENST00000490360 IGHV3-38A0A0C4DH36 116 aa13.19□□□□□ -0.3
UPK3B-205ENST00000490360 TIRAPP58753 221 aa13.19□□□□□ -0.3
UPK3B-205ENST00000490360 AAMDCQ9H7C9 122 aa13.19□□□□□ -0.3
UPK3B-205ENST00000490360 TMEM14CQ9P0S9 112 aa13.19□□□□□ -0.3
UPK3B-205ENST00000490360 TIMM9Q9Y5J7 89 aa13.19□□□□□ -0.3
UPK3B-205ENST00000490360 TRBV7-9A0A0J9YWB2 115 aa13.18□□□□□ -0.3
UPK3B-205ENST00000490360 IBA57-AS1B1ANH7 110 aa13.18□□□□□ -0.3
UPK3B-205ENST00000490360 SCGB1D2O95969 90 aa13.18□□□□□ -0.3
UPK3B-205ENST00000490360 ARL16Q0P5N6 197 aa13.18□□□□□ -0.3
UPK3B-205ENST00000490360 PYDC2Q56P42 97 aa13.18□□□□□ -0.3
UPK3B-205ENST00000490360 LINC01556Q5JQF7 62 aa13.18□□□□□ -0.3
UPK3B-205ENST00000490360 LINC00528Q8N1L1 170 aa13.18□□□□□ -0.3
UPK3B-205ENST00000490360 ZFAND2AQ8N6M9 145 aa13.18□□□□□ -0.3
UPK3B-205ENST00000490360 RASL10AQ92737 203 aa13.18□□□□□ -0.3
UPK3B-205ENST00000490360 IAH1Q2TAA2 248 aaPredicted RBP13.17□□□□□ -0.3
UPK3B-205ENST00000490360 Q6ZSA8 131 aa13.17□□□□□ -0.3
UPK3B-205ENST00000490360 NRARPQ7Z6K4 114 aa13.17□□□□□ -0.3
UPK3B-205ENST00000490360 SPXQ9BT56 116 aa13.17□□□□□ -0.3
UPK3B-205ENST00000490360 SLIRPQ9GZT3 109 aaKnown RBP13.17□□□□□ -0.3
UPK3B-205ENST00000490360 NDUFB4O95168 129 aa13.16□□□□□ -0.3
UPK3B-205ENST00000490360 TMBIM6P55061 237 aa13.16□□□□□ -0.3
UPK3B-205ENST00000490360 MIC13Q5XKP0 118 aa13.16□□□□□ -0.3
UPK3B-205ENST00000490360 ZNF479Q96JC4 524 aa13.16□□□□□ -0.3
UPK3B-205ENST00000490360 MRPS26Q9BYN8 205 aaKnown RBP13.16□□□□□ -0.3
UPK3B-205ENST00000490360 ZNF492Q9P255 531 aa13.16□□□□□ -0.3
UPK3B-205ENST00000490360 C7orf66A4D0T2 115 aa13.15□□□□□ -0.3
UPK3B-205ENST00000490360 SFTA3P0C7M3 94 aa13.15□□□□□ -0.3
UPK3B-205ENST00000490360 RPL29P47914 159 aaKnown RBP13.15□□□□□ -0.3
UPK3B-205ENST00000490360 TDRG1Q3Y452 100 aa13.15□□□□□ -0.3
UPK3B-205ENST00000490360 SLC25A31Q9H0C2 315 aa13.15□□□□□ -0.3
UPK3B-205ENST00000490360 C20orf85Q9H1P6 137 aa13.15□□□□□ -0.3
UPK3B-205ENST00000490360 TRAV8-6A0A0B4J262 113 aa13.14□□□□□ -0.31
UPK3B-205ENST00000490360 OXTP01178 125 aa13.14□□□□□ -0.31
UPK3B-205ENST00000490360 PRR9Q5T870 116 aa13.14□□□□□ -0.31
UPK3B-205ENST00000490360 TM2D2Q9BX73 214 aa13.14□□□□□ -0.31
UPK3B-205ENST00000490360 SLC39A9Q9NUM3 307 aa13.14□□□□□ -0.31
UPK3B-205ENST00000490360 GSKIPQ9P0R6 139 aa13.14□□□□□ -0.31
UPK3B-205ENST00000490360 TRAV4A0A0B4J268 109 aa13.13□□□□□ -0.31
UPK3B-205ENST00000490360 L7N2F9 121 aa13.13□□□□□ -0.31
UPK3B-205ENST00000490360 PPT1P50897 306 aa13.13□□□□□ -0.31
UPK3B-205ENST00000490360 VAMP2P63027 116 aa13.13□□□□□ -0.31
UPK3B-205ENST00000490360 EXOC3-AS1Q8N2X6 119 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms