RNA–Protein interactions for RNA: ENST00000490193.5

USP39-216, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 1,028 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-216ENST00000490193 LINC00305Q7Z4B0 112 aa5.53□□□□□ -1.52
USP39-216ENST00000490193 BPIFA4PQ86YQ2 179 aa5.53□□□□□ -1.52
USP39-216ENST00000490193 NTN5Q8WTR8 489 aaPredicted RBP5.53□□□□□ -1.52
USP39-216ENST00000490193 DIRAS2Q96HU8 199 aa5.53□□□□□ -1.52
USP39-216ENST00000490193 ST6GAL2Q96JF0 529 aa5.53□□□□□ -1.52
USP39-216ENST00000490193 VGLL1Q99990 258 aa5.53□□□□□ -1.52
USP39-216ENST00000490193 NPVFQ9HCQ7 196 aa5.53□□□□□ -1.52
USP39-216ENST00000490193 TRGV1A0A0A0MS02 117 aa5.52□□□□□ -1.53
USP39-216ENST00000490193 C7orf71A4D174 169 aa5.52□□□□□ -1.53
USP39-216ENST00000490193 LRCOL1A6NCL2 159 aa5.52□□□□□ -1.53
USP39-216ENST00000490193 KLLNB2CW77 178 aa5.52□□□□□ -1.53
USP39-216ENST00000490193 SFT2D2O95562 160 aa5.52□□□□□ -1.53
USP39-216ENST00000490193 C1QBP02746 253 aa5.52□□□□□ -1.53
USP39-216ENST00000490193 SLC25A5P05141 298 aaKnown RBP5.52□□□□□ -1.53
USP39-216ENST00000490193 CRYBA4P53673 196 aa5.52□□□□□ -1.53
USP39-216ENST00000490193 HAMPP81172 84 aa5.52□□□□□ -1.53
USP39-216ENST00000490193 MRPL23Q16540 153 aaKnown RBP5.52□□□□□ -1.53
USP39-216ENST00000490193 GUK1Q16774 197 aa5.52□□□□□ -1.53
USP39-216ENST00000490193 TMEM14EPQ6UXP3 125 aa5.52□□□□□ -1.53
USP39-216ENST00000490193 NEGR1Q7Z3B1 354 aa5.52□□□□□ -1.53
USP39-216ENST00000490193 ZNF546Q86UE3 836 aa5.52□□□□□ -1.53
USP39-216ENST00000490193 EIF4E3Q8N5X7 224 aaKnown RBP5.52□□□□□ -1.53
USP39-216ENST00000490193 FAM19A4Q96LR4 140 aa5.52□□□□□ -1.53
USP39-216ENST00000490193 SOSTQ9BQB4 213 aa5.52□□□□□ -1.53
USP39-216ENST00000490193 RSL24D1Q9UHA3 163 aaKnown RBP5.52□□□□□ -1.53
USP39-216ENST00000490193 IGLV5-52A0A0A0MRZ9 124 aa5.51□□□□□ -1.53
USP39-216ENST00000490193 H3BQ15 152 aa5.51□□□□□ -1.53
USP39-216ENST00000490193 ZNF253O75346 499 aa5.51□□□□□ -1.53
USP39-216ENST00000490193 CCNKO75909 580 aa5.51□□□□□ -1.53
USP39-216ENST00000490193 HOXB5P09067 269 aa5.51□□□□□ -1.53
USP39-216ENST00000490193 EVI2AP22794 236 aa5.51□□□□□ -1.53
USP39-216ENST00000490193 FAUP35544 74 aaKnown RBP5.51□□□□□ -1.53
USP39-216ENST00000490193 POLR2GP62487 172 aaKnown RBP eCLIP5.51□□□□□ -1.53
USP39-216ENST00000490193 SLC38A11Q08AI6 406 aa5.51□□□□□ -1.53
USP39-216ENST00000490193 PPP1R1AQ13522 171 aa5.51□□□□□ -1.53
USP39-216ENST00000490193 FHL2Q14192 279 aa5.51□□□□□ -1.53
USP39-216ENST00000490193 ODF1Q14990 250 aa5.51□□□□□ -1.53
USP39-216ENST00000490193 SERTAD4-AS1Q5TG53 156 aa5.51□□□□□ -1.53
USP39-216ENST00000490193 MORN5Q5VZ52 161 aa5.51□□□□□ -1.53
USP39-216ENST00000490193 WFDC10BQ8IUB3 73 aa5.51□□□□□ -1.53
USP39-216ENST00000490193 C10orf126Q8N4M7 172 aa5.51□□□□□ -1.53
USP39-216ENST00000490193 TMEM37Q8WXS4 190 aa5.51□□□□□ -1.53
USP39-216ENST00000490193 MRPL53Q96EL3 112 aaKnown RBP5.51□□□□□ -1.53
USP39-216ENST00000490193 SMIM8Q96KF7 97 aa5.51□□□□□ -1.53
USP39-216ENST00000490193 SLC25A21Q9BQT8 299 aaPredicted RBP5.51□□□□□ -1.53
USP39-216ENST00000490193 PSENENQ9NZ42 101 aa5.51□□□□□ -1.53
USP39-216ENST00000490193 HHLA3Q9XRX5 114 aa5.51□□□□□ -1.53
USP39-216ENST00000490193 KLF12Q9Y4X4 402 aa5.51□□□□□ -1.53
USP39-216ENST00000490193 LRP1Q07954 4544 aaKnown RBP5.5□□□□□ -1.53
USP39-216ENST00000490193 GOSR2O14653 212 aa5.5□□□□□ -1.53
USP39-216ENST00000490193 AGPAT2O15120 278 aa5.5□□□□□ -1.53
USP39-216ENST00000490193 NMBP08949 121 aa5.5□□□□□ -1.53
USP39-216ENST00000490193 SNRPCP09234 159 aaKnown RBP5.5□□□□□ -1.53
USP39-216ENST00000490193 OR4E1P0C645 316 aa5.5□□□□□ -1.53
USP39-216ENST00000490193 CRISP2P16562 243 aa5.5□□□□□ -1.53
USP39-216ENST00000490193 RRAS2P62070 204 aaPredicted RBP5.5□□□□□ -1.53
USP39-216ENST00000490193 OPCMLQ14982 345 aa5.5□□□□□ -1.53
USP39-216ENST00000490193 SPCS2Q15005 226 aa5.5□□□□□ -1.53
USP39-216ENST00000490193 OR10P1Q8NGE3 313 aa5.5□□□□□ -1.53
USP39-216ENST00000490193 DEDD2Q8WXF8 326 aa5.5□□□□□ -1.53
USP39-216ENST00000490193 TRIM63Q969Q1 353 aa5.5□□□□□ -1.53
USP39-216ENST00000490193 GGACTQ9BVM4 153 aa5.5□□□□□ -1.53
USP39-216ENST00000490193 MRPL32Q9BYC8 188 aaKnown RBP5.5□□□□□ -1.53
USP39-216ENST00000490193 CCDC59Q9P031 241 aaKnown RBP5.5□□□□□ -1.53
USP39-216ENST00000490193 MGAT4CQ9UBM8 478 aa5.5□□□□□ -1.53
USP39-216ENST00000490193 H3BTX0 84 aa5.49□□□□□ -1.53
USP39-216ENST00000490193 K7EQD1 137 aa5.49□□□□□ -1.53
USP39-216ENST00000490193 SSSCA1O60232 199 aa5.49□□□□□ -1.53
USP39-216ENST00000490193 COX7A2P2O60397 106 aa5.49□□□□□ -1.53
USP39-216ENST00000490193 PRAF2O60831 178 aa5.49□□□□□ -1.53
USP39-216ENST00000490193 MPDU1O75352 247 aa5.49□□□□□ -1.53
USP39-216ENST00000490193 IGHV3-53P01767 116 aa5.49□□□□□ -1.53
USP39-216ENST00000490193 PLA2G1BP04054 148 aaKnown RBP5.49□□□□□ -1.53
USP39-216ENST00000490193 METTL15P1P0C7V9 234 aa5.49□□□□□ -1.53
USP39-216ENST00000490193 SMIM18P0DKX4 95 aa5.49□□□□□ -1.53
USP39-216ENST00000490193 TAS2R30P59541 319 aa5.49□□□□□ -1.53
USP39-216ENST00000490193 AP3S2P59780 193 aa5.49□□□□□ -1.53
USP39-216ENST00000490193 UBE2MP61081 183 aaKnown RBP5.49□□□□□ -1.53
USP39-216ENST00000490193 CD300CQ08708 224 aa5.49□□□□□ -1.53
USP39-216ENST00000490193 BTN1A1Q13410 526 aa5.49□□□□□ -1.53
USP39-216ENST00000490193 C10orf113Q5VZT2 155 aa5.49□□□□□ -1.53
USP39-216ENST00000490193 Q6ZSA8 131 aa5.49□□□□□ -1.53
USP39-216ENST00000490193 SYT8Q8NBV8 401 aa5.49□□□□□ -1.53
USP39-216ENST00000490193 DYNC2LI1Q8TCX1 351 aa5.49□□□□□ -1.53
USP39-216ENST00000490193 DEFB104AQ8WTQ1 72 aa5.49□□□□□ -1.53
USP39-216ENST00000490193 LINC00477Q96M19 166 aa5.49□□□□□ -1.53
USP39-216ENST00000490193 C8orf49Q96NF6 230 aa5.49□□□□□ -1.53
USP39-216ENST00000490193 MGST2Q99735 147 aa5.49□□□□□ -1.53
USP39-216ENST00000490193 FAM30AQ9NZY2 134 aa5.49□□□□□ -1.53
USP39-216ENST00000490193 M0R3E3 92 aa5.48□□□□□ -1.53
USP39-216ENST00000490193 ORM1P02763 201 aa5.48□□□□□ -1.53
USP39-216ENST00000490193 CRYGDP07320 174 aa5.48□□□□□ -1.53
USP39-216ENST00000490193 SRIP30626 198 aa5.48□□□□□ -1.53
USP39-216ENST00000490193 ZNF415Q09FC8 603 aa5.48□□□□□ -1.53
USP39-216ENST00000490193 ARL16Q0P5N6 197 aa5.48□□□□□ -1.53
USP39-216ENST00000490193 C9orf47Q6ZRZ4 202 aa5.48□□□□□ -1.53
USP39-216ENST00000490193 ZFAND2AQ8N6M9 145 aa5.48□□□□□ -1.53
USP39-216ENST00000490193 Q8N814 137 aa5.48□□□□□ -1.53
USP39-216ENST00000490193 OR10G4Q8NGN3 311 aa5.48□□□□□ -1.53
USP39-216ENST00000490193 AGPAT4-IT1Q9H0P7 198 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms