RNA–Protein interactions for RNA: ENST00000490062.1

ERCC3-207, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 4

Gene ERCC3, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-207ENST00000490062 SFT2D1Q8WV19 159 aa12.66□□□□□ -0.38
ERCC3-207ENST00000490062 RARRES2Q99969 163 aa12.66□□□□□ -0.38
ERCC3-207ENST00000490062 TCEAL7Q9BRU2 100 aa12.66□□□□□ -0.38
ERCC3-207ENST00000490062 TMPRSS5Q9H3S3 457 aa12.66□□□□□ -0.38
ERCC3-207ENST00000490062 ZNF492Q9P255 531 aa12.66□□□□□ -0.38
ERCC3-207ENST00000490062 X6R8D5 127 aa12.66□□□□□ -0.38
ERCC3-207ENST00000490062 IGKV2-40A0A087WW87 121 aaPredicted RBP12.65□□□□□ -0.38
ERCC3-207ENST00000490062 FAM74A7A6NL05 159 aa12.65□□□□□ -0.38
ERCC3-207ENST00000490062 IGKV2D-40P01614 121 aaPredicted RBP12.65□□□□□ -0.38
ERCC3-207ENST00000490062 PMS2P11Q13670 270 aa12.65□□□□□ -0.38
ERCC3-207ENST00000490062 SPINK13Q1W4C9 94 aa12.65□□□□□ -0.38
ERCC3-207ENST00000490062 C1orf158Q8N1D5 194 aa12.65□□□□□ -0.38
ERCC3-207ENST00000490062 OR11H2Q8NH07 326 aa12.65□□□□□ -0.38
ERCC3-207ENST00000490062 VGLL1Q99990 258 aa12.65□□□□□ -0.38
ERCC3-207ENST00000490062 C11orf68Q9H3H3 251 aaKnown RBP12.65□□□□□ -0.38
ERCC3-207ENST00000490062 SMIM9A6NGZ8 99 aa12.64□□□□□ -0.39
ERCC3-207ENST00000490062 KLLNB2CW77 178 aa12.64□□□□□ -0.39
ERCC3-207ENST00000490062 M0R2Z0 102 aa12.64□□□□□ -0.39
ERCC3-207ENST00000490062 INSP01308 110 aa12.64□□□□□ -0.39
ERCC3-207ENST00000490062 MIFP14174 115 aa12.64□□□□□ -0.39
ERCC3-207ENST00000490062 LEPP41159 167 aa12.64□□□□□ -0.39
ERCC3-207ENST00000490062 PPT1P50897 306 aa12.64□□□□□ -0.39
ERCC3-207ENST00000490062 FXYD7P58549 80 aa12.64□□□□□ -0.39
ERCC3-207ENST00000490062 SUMO1P63165 101 aaKnown RBP12.64□□□□□ -0.39
ERCC3-207ENST00000490062 TMEM78Q5T7P6 136 aa12.64□□□□□ -0.39
ERCC3-207ENST00000490062 CCDC28AQ8IWP9 274 aa12.64□□□□□ -0.39
ERCC3-207ENST00000490062 EPDR1Q9UM22 224 aa12.64□□□□□ -0.39
ERCC3-207ENST00000490062 BOLA1Q9Y3E2 137 aa12.64□□□□□ -0.39
ERCC3-207ENST00000490062 YTHDF2Q9Y5A9 579 aaKnown RBP12.64□□□□□ -0.39
ERCC3-207ENST00000490062 FBLL1A6NHQ2 334 aaKnown RBP12.63□□□□□ -0.39
ERCC3-207ENST00000490062 HBE1P02100 147 aa12.63□□□□□ -0.39
ERCC3-207ENST00000490062 TCRAP04437 139 aa12.63□□□□□ -0.39
ERCC3-207ENST00000490062 ZNF138P52744 262 aa12.63□□□□□ -0.39
ERCC3-207ENST00000490062 ERCC8Q13216 396 aa12.63□□□□□ -0.39
ERCC3-207ENST00000490062 IQCF2Q8IXL9 164 aa12.63□□□□□ -0.39
ERCC3-207ENST00000490062 TMEM256Q8N2U0 113 aa12.63□□□□□ -0.39
ERCC3-207ENST00000490062 Q8NAQ8 132 aa12.63□□□□□ -0.39
ERCC3-207ENST00000490062 WWC2-AS2Q96NR7 200 aa12.63□□□□□ -0.39
ERCC3-207ENST00000490062 GOLT1BQ9Y3E0 138 aa12.63□□□□□ -0.39
ERCC3-207ENST00000490062 TEX46H3BTG2 121 aa12.62□□□□□ -0.39
ERCC3-207ENST00000490062 ZFAND2AQ8N6M9 145 aa12.62□□□□□ -0.39
ERCC3-207ENST00000490062 HIST1H2BAQ96A08 127 aa12.62□□□□□ -0.39
ERCC3-207ENST00000490062 ATG101Q9BSB4 218 aa12.62□□□□□ -0.39
ERCC3-207ENST00000490062 PRB4P10163 310 aaPredicted RBP12.61□□□□□ -0.39
ERCC3-207ENST00000490062 GOLT1AQ6ZVE7 132 aa12.61□□□□□ -0.39
ERCC3-207ENST00000490062 CYB561D1Q8N8Q1 229 aa12.61□□□□□ -0.39
ERCC3-207ENST00000490062 K7EQM0 130 aa12.6□□□□□ -0.39
ERCC3-207ENST00000490062 RBMY1A1P0DJD3 496 aaKnown RBP12.6□□□□□ -0.39
ERCC3-207ENST00000490062 RBMY1CP0DJD4 496 aa12.6□□□□□ -0.39
ERCC3-207ENST00000490062 GNG5P63218 68 aa12.6□□□□□ -0.39
ERCC3-207ENST00000490062 RBMY1FQ15415 496 aaKnown RBP12.6□□□□□ -0.39
ERCC3-207ENST00000490062 GFI1BQ5VTD9 330 aa12.6□□□□□ -0.39
ERCC3-207ENST00000490062 ALKAL2Q6UX46 152 aa12.6□□□□□ -0.39
ERCC3-207ENST00000490062 TMEM75Q8N9X5 138 aa12.6□□□□□ -0.39
ERCC3-207ENST00000490062 LYPD6BQ8NI32 183 aa12.6□□□□□ -0.39
ERCC3-207ENST00000490062 TRAV12-2A0A075B6T6 113 aa12.59□□□□□ -0.39
ERCC3-207ENST00000490062 IGLV2-11P01706 119 aa12.59□□□□□ -0.39
ERCC3-207ENST00000490062 UBE2G2P60604 165 aa12.59□□□□□ -0.39
ERCC3-207ENST00000490062 BLOC1S1P78537 153 aa12.59□□□□□ -0.39
ERCC3-207ENST00000490062 TXNDC17Q9BRA2 123 aa12.59□□□□□ -0.39
ERCC3-207ENST00000490062 MANBALQ9NQG1 85 aa12.59□□□□□ -0.39
ERCC3-207ENST00000490062 IGHV4-28A0A0C4DH34 117 aa12.58□□□□□ -0.4
ERCC3-207ENST00000490062 C7orf71A4D174 169 aa12.58□□□□□ -0.4
ERCC3-207ENST00000490062 H7BYZ3 331 aa12.58□□□□□ -0.4
ERCC3-207ENST00000490062 PAGE4O60829 102 aa12.58□□□□□ -0.4
ERCC3-207ENST00000490062 TAS2R60P59551 318 aa12.58□□□□□ -0.4
ERCC3-207ENST00000490062 CCL20P78556 96 aa12.58□□□□□ -0.4
ERCC3-207ENST00000490062 KIR3DS1Q14943 382 aa12.58□□□□□ -0.4
ERCC3-207ENST00000490062 LINC00467Q9BRT7 94 aa12.58□□□□□ -0.4
ERCC3-207ENST00000490062 KLF12Q9Y4X4 402 aa12.58□□□□□ -0.4
ERCC3-207ENST00000490062 DNAH7Q8WXX0 4024 aa12.57□□□□□ -0.4
ERCC3-207ENST00000490062 A0A0J9YWU9 116 aa12.57□□□□□ -0.4
ERCC3-207ENST00000490062 TRBV6-1A0A0K0K1D8 114 aa12.57□□□□□ -0.4
ERCC3-207ENST00000490062 TMEM189A5PLL7 270 aa12.57□□□□□ -0.4
ERCC3-207ENST00000490062 F6UZH7 168 aa12.57□□□□□ -0.4
ERCC3-207ENST00000490062 PEX7O00628 323 aa12.57□□□□□ -0.4
ERCC3-207ENST00000490062 ZNF324O75467 553 aaPredicted RBP12.57□□□□□ -0.4
ERCC3-207ENST00000490062 Q8TAT8 98 aa12.57□□□□□ -0.4
ERCC3-207ENST00000490062 TRAV8-1A0A0A6YYK1 113 aa12.56□□□□□ -0.4
ERCC3-207ENST00000490062 IFNA7P01567 189 aa12.56□□□□□ -0.4
ERCC3-207ENST00000490062 TAGLN2P37802 199 aaKnown RBP12.56□□□□□ -0.4
ERCC3-207ENST00000490062 ATP5G3P48201 142 aa12.56□□□□□ -0.4
ERCC3-207ENST00000490062 RRN3P1Q2M238 152 aa12.56□□□□□ -0.4
ERCC3-207ENST00000490062 Q6AWC8 147 aa12.56□□□□□ -0.4
ERCC3-207ENST00000490062 TVP23CQ96ET8 276 aa12.56□□□□□ -0.4
ERCC3-207ENST00000490062 PYGO2Q9BRQ0 406 aa12.56□□□□□ -0.4
ERCC3-207ENST00000490062 RPH3ALQ9UNE2 315 aa12.56□□□□□ -0.4
ERCC3-207ENST00000490062 GPX1P07203 203 aa12.55□□□□□ -0.4
ERCC3-207ENST00000490062 FLI1Q01543 452 aaPredicted RBP12.55□□□□□ -0.4
ERCC3-207ENST00000490062 PRR9Q5T870 116 aa12.55□□□□□ -0.4
ERCC3-207ENST00000490062 CST9LP1Q5W188 147 aa12.55□□□□□ -0.4
ERCC3-207ENST00000490062 TEX261Q6UWH6 196 aa12.55□□□□□ -0.4
ERCC3-207ENST00000490062 COX8CQ7Z4L0 72 aa12.55□□□□□ -0.4
ERCC3-207ENST00000490062 IL17DQ8TAD2 202 aa12.55□□□□□ -0.4
ERCC3-207ENST00000490062 NIPSNAP3BQ9BS92 247 aa12.55□□□□□ -0.4
ERCC3-207ENST00000490062 TMEM208Q9BTX3 173 aa12.55□□□□□ -0.4
ERCC3-207ENST00000490062 PSG8Q9UQ74 426 aa12.55□□□□□ -0.4
ERCC3-207ENST00000490062 A0A1B0GV50 99 aa12.54□□□□□ -0.4
ERCC3-207ENST00000490062 SAPCD1Q5SSQ6 148 aa12.54□□□□□ -0.4
ERCC3-207ENST00000490062 ZNF493Q6ZR52 646 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 107 ms