RNA–Protein interactions for RNA: ENST00000490032.5

HMGN1-218, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 405 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-218ENST00000490032 HIGD1BQ9P298 99 aa1.44□□□□□ -2.18
HMGN1-218ENST00000490032 CES1P1Q9UKY3 287 aa1.44□□□□□ -2.18
HMGN1-218ENST00000490032 RCL1Q9Y2P8 373 aaKnown RBP1.44□□□□□ -2.18
HMGN1-218ENST00000490032 HDGFL3Q9Y3E1 203 aa1.44□□□□□ -2.18
HMGN1-218ENST00000490032 KLF12Q9Y4X4 402 aa1.44□□□□□ -2.18
HMGN1-218ENST00000490032 TSSC4Q9Y5U2 329 aaPredicted RBP1.44□□□□□ -2.18
HMGN1-218ENST00000490032 ANKRD36A6QL64 1941 aa1.44□□□□□ -2.18
HMGN1-218ENST00000490032 HEATR5AQ86XA9 2040 aa1.44□□□□□ -2.18
HMGN1-218ENST00000490032 LRRC37A2A6NM11 1700 aa1.43□□□□□ -2.18
HMGN1-218ENST00000490032 TPRP12270 2363 aaKnown RBP1.43□□□□□ -2.18
HMGN1-218ENST00000490032 BAHCC1Q9P281 2608 aa1.43□□□□□ -2.18
HMGN1-218ENST00000490032 BAZ2BQ9UIF8 2168 aaKnown RBP1.43□□□□□ -2.18
HMGN1-218ENST00000490032 TRGV10A0A0A0MS01 117 aa1.43□□□□□ -2.18
HMGN1-218ENST00000490032 TRAV14DV4A0A0A6YYC5 116 aa1.43□□□□□ -2.18
HMGN1-218ENST00000490032 TRAV2A0A0B4J234 112 aa1.43□□□□□ -2.18
HMGN1-218ENST00000490032 IGHV1-24A0A0C4DH33 117 aa1.43□□□□□ -2.18
HMGN1-218ENST00000490032 C3orf85A0A1B0GTC6 90 aa1.43□□□□□ -2.18
HMGN1-218ENST00000490032 A0A1W2PRE2 83 aa1.43□□□□□ -2.18
HMGN1-218ENST00000490032 IZUMO1RA6ND01 250 aa1.43□□□□□ -2.18
HMGN1-218ENST00000490032 SMIM9A6NGZ8 99 aa1.43□□□□□ -2.18
HMGN1-218ENST00000490032 OR2T8A6NH00 312 aa1.43□□□□□ -2.18
HMGN1-218ENST00000490032 OR4C46A6NHA9 309 aa1.43□□□□□ -2.18
HMGN1-218ENST00000490032 A6NIN4 97 aa1.43□□□□□ -2.18
HMGN1-218ENST00000490032 LYRM9A8MSI8 78 aa1.43□□□□□ -2.18
HMGN1-218ENST00000490032 C9JAW5 83 aa1.43□□□□□ -2.18
HMGN1-218ENST00000490032 NDUFC2-KCTD14E9PQ53 114 aa1.43□□□□□ -2.18
HMGN1-218ENST00000490032 M0QXV9 152 aa1.43□□□□□ -2.18
HMGN1-218ENST00000490032 LYZL6O75951 148 aa1.43□□□□□ -2.18
HMGN1-218ENST00000490032 CRYGBP07316 175 aa1.43□□□□□ -2.18
HMGN1-218ENST00000490032 LGALS1P09382 135 aaKnown RBP1.43□□□□□ -2.18
HMGN1-218ENST00000490032 IFI6P09912 130 aa1.43□□□□□ -2.18
HMGN1-218ENST00000490032 PYYP10082 97 aa1.43□□□□□ -2.18
HMGN1-218ENST00000490032 COX8AP10176 69 aa1.43□□□□□ -2.18
HMGN1-218ENST00000490032 GABRG2P18507 467 aa1.43□□□□□ -2.18
HMGN1-218ENST00000490032 ADCYAP1P18509 176 aa1.43□□□□□ -2.18
HMGN1-218ENST00000490032 IL3RAP26951 378 aa1.43□□□□□ -2.18
HMGN1-218ENST00000490032 PSMB5P28074 263 aa1.43□□□□□ -2.18
HMGN1-218ENST00000490032 BLVRBP30043 206 aaPredicted RBP1.43□□□□□ -2.18
HMGN1-218ENST00000490032 TNFSF9P41273 254 aa1.43□□□□□ -2.18
HMGN1-218ENST00000490032 FBXW4P57775 412 aa1.43□□□□□ -2.18
HMGN1-218ENST00000490032 TMEM258P61165 79 aa1.43□□□□□ -2.18
HMGN1-218ENST00000490032 RPL31P62899 125 aaKnown RBP1.43□□□□□ -2.18
HMGN1-218ENST00000490032 GNG5P63218 68 aa1.43□□□□□ -2.18
HMGN1-218ENST00000490032 PSG9Q00887 426 aa1.43□□□□□ -2.18
HMGN1-218ENST00000490032 PLGLB1Q02325 96 aa1.43□□□□□ -2.18
HMGN1-218ENST00000490032 LAMTOR4Q0VGL1 99 aa1.43□□□□□ -2.18
HMGN1-218ENST00000490032 CATR1Q13166 79 aa1.43□□□□□ -2.18
HMGN1-218ENST00000490032 PLGLAQ15195 96 aa1.43□□□□□ -2.18
HMGN1-218ENST00000490032 CEACAM16Q2WEN9 425 aa1.43□□□□□ -2.18
HMGN1-218ENST00000490032 MPV17L2Q567V2 206 aa1.43□□□□□ -2.18
HMGN1-218ENST00000490032 C6orf226Q5I0X4 101 aa1.43□□□□□ -2.18
HMGN1-218ENST00000490032 BVES-AS1Q5T3Y7 98 aa1.43□□□□□ -2.18
HMGN1-218ENST00000490032 IBA57Q5T440 356 aaKnown RBP1.43□□□□□ -2.18
HMGN1-218ENST00000490032 TMEM78Q5T7P6 136 aa1.43□□□□□ -2.18
HMGN1-218ENST00000490032 C9orf153Q5TBE3 101 aa1.43□□□□□ -2.18
HMGN1-218ENST00000490032 TMEM215Q68D42 235 aa1.43□□□□□ -2.18
HMGN1-218ENST00000490032 Q6AWC8 147 aa1.43□□□□□ -2.18
HMGN1-218ENST00000490032 SPATA12Q7Z6I5 190 aa1.43□□□□□ -2.18
HMGN1-218ENST00000490032 APRG1Q8IVJ8 170 aa1.43□□□□□ -2.18
HMGN1-218ENST00000490032 DRAM1Q8N682 238 aa1.43□□□□□ -2.18
HMGN1-218ENST00000490032 ZNF645Q8N7E2 425 aa1.43□□□□□ -2.18
HMGN1-218ENST00000490032 CDRT4Q8N9R6 151 aa1.43□□□□□ -2.18
HMGN1-218ENST00000490032 WDR31Q8NA23 367 aa1.43□□□□□ -2.18
HMGN1-218ENST00000490032 NUP35Q8NFH5 326 aa1.43□□□□□ -2.18
HMGN1-218ENST00000490032 OR5C1Q8NGR4 320 aa1.43□□□□□ -2.18
HMGN1-218ENST00000490032 OR1L8Q8NGR8 309 aa1.43□□□□□ -2.18
HMGN1-218ENST00000490032 ZNRF2Q8NHG8 242 aa1.43□□□□□ -2.18
HMGN1-218ENST00000490032 CACNG8Q8WXS5 425 aa1.43□□□□□ -2.18
HMGN1-218ENST00000490032 TEX37Q96LM6 180 aa1.43□□□□□ -2.18
HMGN1-218ENST00000490032 TMEM147Q9BVK8 224 aa1.43□□□□□ -2.18
HMGN1-218ENST00000490032 TMEM59Q9BXS4 323 aa1.43□□□□□ -2.18
HMGN1-218ENST00000490032 OSTCQ9NRP0 149 aa1.43□□□□□ -2.18
HMGN1-218ENST00000490032 PRO0628Q9UI54 55 aa1.43□□□□□ -2.18
HMGN1-218ENST00000490032 LSM7Q9UK45 103 aaKnown RBP1.43□□□□□ -2.18
HMGN1-218ENST00000490032 HIGD1AQ9Y241 93 aa1.43□□□□□ -2.18
HMGN1-218ENST00000490032 MPC1Q9Y5U8 109 aa1.43□□□□□ -2.18
HMGN1-218ENST00000490032 FAM186AA6NE01 2351 aa1.43□□□□□ -2.18
HMGN1-218ENST00000490032 MGAMO43451 1857 aa1.43□□□□□ -2.18
HMGN1-218ENST00000490032 ACACBO00763 2458 aa1.43□□□□□ -2.18
HMGN1-218ENST00000490032 RIF1Q5UIP0 2472 aaKnown RBP1.43□□□□□ -2.18
HMGN1-218ENST00000490032 TSC2P49815 1807 aa1.43□□□□□ -2.18
HMGN1-218ENST00000490032 GVINP1Q7Z2Y8 2422 aa1.42□□□□□ -2.18
HMGN1-218ENST00000490032 NCOR2Q9Y618 2525 aa1.42□□□□□ -2.18
HMGN1-218ENST00000490032 SCN3AQ9NY46 2000 aa1.42□□□□□ -2.18
HMGN1-218ENST00000490032 SPTBN5Q9NRC6 3674 aaKnown RBP1.42□□□□□ -2.18
HMGN1-218ENST00000490032 BRCA2P51587 3418 aa1.42□□□□□ -2.18
HMGN1-218ENST00000490032 NUMA1Q14980 2115 aa1.42□□□□□ -2.18
HMGN1-218ENST00000490032 PRRC2BQ5JSZ5 2229 aaKnown RBP1.42□□□□□ -2.18
HMGN1-218ENST00000490032 ZFHX2Q9C0A1 2572 aaPredicted RBP1.42□□□□□ -2.18
HMGN1-218ENST00000490032 UNC80Q8N2C7 3258 aa1.42□□□□□ -2.18
HMGN1-218ENST00000490032 LOC102724200A0A096LPH7 203 aaPredicted RBP1.42□□□□□ -2.18
HMGN1-218ENST00000490032 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.42□□□□□ -2.18
HMGN1-218ENST00000490032 TRAV8-2A0A0B4J237 113 aa1.42□□□□□ -2.18
HMGN1-218ENST00000490032 TRAV8-4A0A0B4J246 113 aa1.42□□□□□ -2.18
HMGN1-218ENST00000490032 UBE2L5PA0A1B0GUS4 154 aa1.42□□□□□ -2.18
HMGN1-218ENST00000490032 CRYM-AS1A6NIL9 109 aa1.42□□□□□ -2.18
HMGN1-218ENST00000490032 C21orf140B9A014 251 aa1.42□□□□□ -2.18
HMGN1-218ENST00000490032 C9JCJ5 164 aa1.42□□□□□ -2.18
HMGN1-218ENST00000490032 H0YJW9 148 aa1.42□□□□□ -2.18
HMGN1-218ENST00000490032 SYS1-DBNDD2H3BUS1 97 aa1.42□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms