RNA–Protein interactions for RNA: ENST00000489808.1

EPHB4-207, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-207ENST00000489808 J3KRW8 73 aa13.61□□□□□ -0.23
EPHB4-207ENST00000489808 PSMG3Q9BT73 122 aaPredicted RBP13.61□□□□□ -0.23
EPHB4-207ENST00000489808 IGHV4-4A0A075B6R2 117 aa13.6□□□□□ -0.23
EPHB4-207ENST00000489808 IGKV2-40A0A087WW87 121 aaPredicted RBP13.6□□□□□ -0.23
EPHB4-207ENST00000489808 LYRM9A8MSI8 78 aa13.6□□□□□ -0.23
EPHB4-207ENST00000489808 IGKV2D-40P01614 121 aaPredicted RBP13.6□□□□□ -0.23
EPHB4-207ENST00000489808 SERF2P84101 59 aa13.6□□□□□ -0.23
EPHB4-207ENST00000489808 PQLC2Q6ZP29 291 aa13.6□□□□□ -0.23
EPHB4-207ENST00000489808 VGLL1Q99990 258 aa13.6□□□□□ -0.23
EPHB4-207ENST00000489808 Q9H3A6 140 aa13.6□□□□□ -0.23
EPHB4-207ENST00000489808 TRAV12-3A0A0B4J271 114 aa13.59□□□□□ -0.23
EPHB4-207ENST00000489808 SLC25A5P05141 298 aaKnown RBP13.59□□□□□ -0.23
EPHB4-207ENST00000489808 CSN1S1P47710 185 aa13.59□□□□□ -0.23
EPHB4-207ENST00000489808 DAD1P61803 113 aa13.59□□□□□ -0.23
EPHB4-207ENST00000489808 RPL7L1Q6DKI1 246 aaKnown RBP13.59□□□□□ -0.23
EPHB4-207ENST00000489808 ZNF493Q6ZR52 646 aa13.59□□□□□ -0.23
EPHB4-207ENST00000489808 KLLNB2CW77 178 aa13.58□□□□□ -0.24
EPHB4-207ENST00000489808 MBP02144 154 aa13.58□□□□□ -0.24
EPHB4-207ENST00000489808 NMBP08949 121 aa13.58□□□□□ -0.24
EPHB4-207ENST00000489808 TMEM78Q5T7P6 136 aa13.58□□□□□ -0.24
EPHB4-207ENST00000489808 C16orf74Q96GX8 76 aa13.58□□□□□ -0.24
EPHB4-207ENST00000489808 SH3BGRL3Q9H299 93 aa13.58□□□□□ -0.24
EPHB4-207ENST00000489808 ZNF492Q9P255 531 aa13.58□□□□□ -0.24
EPHB4-207ENST00000489808 KMT2AQ03164 3969 aa13.57□□□□□ -0.24
EPHB4-207ENST00000489808 BORCS7-ASMTA0A0B4J1R7 106 aa13.57□□□□□ -0.24
EPHB4-207ENST00000489808 HMGB3O15347 200 aaKnown RBP13.57□□□□□ -0.24
EPHB4-207ENST00000489808 ZNF324O75467 553 aaPredicted RBP13.57□□□□□ -0.24
EPHB4-207ENST00000489808 CRISP2P16562 243 aa13.57□□□□□ -0.24
EPHB4-207ENST00000489808 CDC34P49427 236 aaPredicted RBP13.57□□□□□ -0.24
EPHB4-207ENST00000489808 CCDC28AQ8IWP9 274 aa13.57□□□□□ -0.24
EPHB4-207ENST00000489808 RNASE8Q8TDE3 154 aaKnown RBP13.57□□□□□ -0.24
EPHB4-207ENST00000489808 RXFP4Q8TDU9 374 aa13.57□□□□□ -0.24
EPHB4-207ENST00000489808 TMEM263Q8WUH6 116 aaKnown RBP13.57□□□□□ -0.24
EPHB4-207ENST00000489808 GNPNAT1Q96EK6 184 aaPredicted RBP13.57□□□□□ -0.24
EPHB4-207ENST00000489808 TIMM8BQ9Y5J9 83 aaPredicted RBP13.57□□□□□ -0.24
EPHB4-207ENST00000489808 C7orf71A4D174 169 aa13.56□□□□□ -0.24
EPHB4-207ENST00000489808 RBAKDNA6NC62 111 aa13.56□□□□□ -0.24
EPHB4-207ENST00000489808 PGPA6NDG6 321 aa13.56□□□□□ -0.24
EPHB4-207ENST00000489808 DEFB130BP0DP73 79 aa13.56□□□□□ -0.24
EPHB4-207ENST00000489808 DEFB130AP0DP74 79 aa13.56□□□□□ -0.24
EPHB4-207ENST00000489808 ZNF138P52744 262 aa13.56□□□□□ -0.24
EPHB4-207ENST00000489808 CD300CQ08708 224 aa13.56□□□□□ -0.24
EPHB4-207ENST00000489808 ZFAND2AQ8N6M9 145 aa13.56□□□□□ -0.24
EPHB4-207ENST00000489808 RAB24Q969Q5 203 aa13.56□□□□□ -0.24
EPHB4-207ENST00000489808 FAM210BQ96KR6 192 aa13.56□□□□□ -0.24
EPHB4-207ENST00000489808 PYGO2Q9BRQ0 406 aa13.56□□□□□ -0.24
EPHB4-207ENST00000489808 OTORQ9NRC9 128 aa13.56□□□□□ -0.24
EPHB4-207ENST00000489808 DIRC3C9JPN6 131 aa13.55□□□□□ -0.24
EPHB4-207ENST00000489808 SMLR1H3BR10 107 aa13.55□□□□□ -0.24
EPHB4-207ENST00000489808 GPX1P07203 203 aa13.55□□□□□ -0.24
EPHB4-207ENST00000489808 STAG3L2P0CL84 134 aa13.55□□□□□ -0.24
EPHB4-207ENST00000489808 STAG3L3P0CL85 134 aa13.55□□□□□ -0.24
EPHB4-207ENST00000489808 RNASE4P34096 147 aaKnown RBP13.55□□□□□ -0.24
EPHB4-207ENST00000489808 HYLS1Q96M11 299 aa13.55□□□□□ -0.24
EPHB4-207ENST00000489808 NDUFAF3Q9BU61 184 aa13.55□□□□□ -0.24
EPHB4-207ENST00000489808 TRBV7-9A0A0J9YWB2 115 aa13.54□□□□□ -0.24
EPHB4-207ENST00000489808 TAAR5O14804 337 aa13.54□□□□□ -0.24
EPHB4-207ENST00000489808 ARPC5O15511 151 aa13.54□□□□□ -0.24
EPHB4-207ENST00000489808 HTN3P15516 51 aa13.54□□□□□ -0.24
EPHB4-207ENST00000489808 BTN1A1Q13410 526 aa13.54□□□□□ -0.24
EPHB4-207ENST00000489808 FAM74A1Q5RGS3 127 aa13.54□□□□□ -0.24
EPHB4-207ENST00000489808 ACTR3CQ9C0K3 210 aaPredicted RBP13.54□□□□□ -0.24
EPHB4-207ENST00000489808 NOP10Q9NPE3 64 aaKnown RBP13.54□□□□□ -0.24
EPHB4-207ENST00000489808 CYTL1Q9NRR1 136 aa13.54□□□□□ -0.24
EPHB4-207ENST00000489808 ARL14EPLP0DKL9 152 aa13.53□□□□□ -0.24
EPHB4-207ENST00000489808 ARL6IP6Q8N6S5 226 aa13.53□□□□□ -0.24
EPHB4-207ENST00000489808 CMTM2Q8TAZ6 248 aa13.53□□□□□ -0.24
EPHB4-207ENST00000489808 SUN5Q8TC36 379 aa13.53□□□□□ -0.24
EPHB4-207ENST00000489808 LINC00467Q9BRT7 94 aa13.53□□□□□ -0.24
EPHB4-207ENST00000489808 CBY3A6NI87 242 aa13.52□□□□□ -0.25
EPHB4-207ENST00000489808 Q8TAT8 98 aa13.52□□□□□ -0.25
EPHB4-207ENST00000489808 GCHFRP30047 84 aa13.51□□□□□ -0.25
EPHB4-207ENST00000489808 PRR9Q5T870 116 aa13.51□□□□□ -0.25
EPHB4-207ENST00000489808 CXorf1O96002 111 aa13.5□□□□□ -0.25
EPHB4-207ENST00000489808 ANXA2RQ3ZCQ2 193 aa13.5□□□□□ -0.25
EPHB4-207ENST00000489808 Q6ZQT7 251 aa13.5□□□□□ -0.25
EPHB4-207ENST00000489808 EIF4E3Q8N5X7 224 aaKnown RBP13.5□□□□□ -0.25
EPHB4-207ENST00000489808 OR11H4Q8NGC9 324 aa13.5□□□□□ -0.25
EPHB4-207ENST00000489808 TMED6Q8WW62 240 aa13.5□□□□□ -0.25
EPHB4-207ENST00000489808 LENEPQ9Y5L5 61 aa13.5□□□□□ -0.25
EPHB4-207ENST00000489808 HMSDA8MTL9 139 aa13.49□□□□□ -0.25
EPHB4-207ENST00000489808 SNURFLB1AK76 121 aa13.49□□□□□ -0.25
EPHB4-207ENST00000489808 DAZ2Q13117 558 aaKnown RBP13.49□□□□□ -0.25
EPHB4-207ENST00000489808 TMEM88Q6PEY1 159 aa13.49□□□□□ -0.25
EPHB4-207ENST00000489808 SSX7Q7RTT5 188 aa13.49□□□□□ -0.25
EPHB4-207ENST00000489808 KCNRGQ8N5I3 272 aa13.49□□□□□ -0.25
EPHB4-207ENST00000489808 LINC00612Q8N6U2 182 aa13.49□□□□□ -0.25
EPHB4-207ENST00000489808 ST6GAL2Q96JF0 529 aa13.49□□□□□ -0.25
EPHB4-207ENST00000489808 TMEM167BQ9NRX6 74 aa13.49□□□□□ -0.25
EPHB4-207ENST00000489808 RPH3ALQ9UNE2 315 aa13.49□□□□□ -0.25
EPHB4-207ENST00000489808 ATP5G1P05496 136 aa13.48□□□□□ -0.25
EPHB4-207ENST00000489808 ATP5G3P48201 142 aa13.48□□□□□ -0.25
EPHB4-207ENST00000489808 ZNF726P1Q15940 193 aa13.48□□□□□ -0.25
EPHB4-207ENST00000489808 GOLT1AQ6ZVE7 132 aa13.48□□□□□ -0.25
EPHB4-207ENST00000489808 ZNF680Q8NEM1 530 aa13.48□□□□□ -0.25
EPHB4-207ENST00000489808 GSN-AS1Q9NRJ2 163 aa13.48□□□□□ -0.25
EPHB4-207ENST00000489808 DNAH6Q9C0G6 4158 aa13.47□□□□□ -0.25
EPHB4-207ENST00000489808 IGHV1OR15-1A0A075B7D0 117 aa13.47□□□□□ -0.25
EPHB4-207ENST00000489808 F5H768 121 aa13.47□□□□□ -0.25
EPHB4-207ENST00000489808 RGS13O14921 159 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms