RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 LGALSLQ3ZCW2 172 aaPredicted RBP8□□□□□ -1.13
CPSF7-212ENST00000489728 ZFP69Q49AA0 526 aa8□□□□□ -1.13
CPSF7-212ENST00000489728 SLC51BQ86UW2 128 aa8□□□□□ -1.13
CPSF7-212ENST00000489728 C5orf17Q8NAS9 161 aa8□□□□□ -1.13
CPSF7-212ENST00000489728 TMEM208Q9BTX3 173 aa8□□□□□ -1.13
CPSF7-212ENST00000489728 NKX6-2Q9C056 277 aaPredicted RBP8□□□□□ -1.13
CPSF7-212ENST00000489728 ARL2-SNX15V9GYD0 113 aa8□□□□□ -1.13
CPSF7-212ENST00000489728 IGKV2-40A0A087WW87 121 aaPredicted RBP7.99□□□□□ -1.13
CPSF7-212ENST00000489728 MAP1LC3B2A6NCE7 125 aa7.99□□□□□ -1.13
CPSF7-212ENST00000489728 PGPA6NDG6 321 aa7.99□□□□□ -1.13
CPSF7-212ENST00000489728 FBLL1A6NHQ2 334 aaKnown RBP7.99□□□□□ -1.13
CPSF7-212ENST00000489728 KLLNB2CW77 178 aa7.99□□□□□ -1.13
CPSF7-212ENST00000489728 DIRC3C9JPN6 131 aa7.99□□□□□ -1.13
CPSF7-212ENST00000489728 H7BYZ3 331 aa7.99□□□□□ -1.13
CPSF7-212ENST00000489728 IGKV2D-40P01614 121 aaPredicted RBP7.99□□□□□ -1.13
CPSF7-212ENST00000489728 RBMY1A1P0DJD3 496 aaKnown RBP7.99□□□□□ -1.13
CPSF7-212ENST00000489728 RBMY1CP0DJD4 496 aa7.99□□□□□ -1.13
CPSF7-212ENST00000489728 TAS2R60P59551 318 aa7.99□□□□□ -1.13
CPSF7-212ENST00000489728 RBMY1FQ15415 496 aaKnown RBP7.99□□□□□ -1.13
CPSF7-212ENST00000489728 RRN3P1Q2M238 152 aa7.99□□□□□ -1.13
CPSF7-212ENST00000489728 CASC10Q5T4H9 136 aa7.99□□□□□ -1.13
CPSF7-212ENST00000489728 SSX7Q7RTT5 188 aa7.99□□□□□ -1.13
CPSF7-212ENST00000489728 C11orf45Q8TAV5 145 aa7.99□□□□□ -1.13
CPSF7-212ENST00000489728 TCEAL7Q9BRU2 100 aa7.99□□□□□ -1.13
CPSF7-212ENST00000489728 MAP1LC3BQ9GZQ8 125 aa7.99□□□□□ -1.13
CPSF7-212ENST00000489728 AGPAT4-IT1Q9H0P7 198 aa7.99□□□□□ -1.13
CPSF7-212ENST00000489728 ZNF492Q9P255 531 aa7.99□□□□□ -1.13
CPSF7-212ENST00000489728 DNAH7Q8WXX0 4024 aa7.99□□□□□ -1.13
CPSF7-212ENST00000489728 TRAV12-2A0A075B6T6 113 aa7.98□□□□□ -1.13
CPSF7-212ENST00000489728 IGHV3OR16-12A0A075B7B8 117 aa7.98□□□□□ -1.13
CPSF7-212ENST00000489728 NUPR2A6NF83 97 aa7.98□□□□□ -1.13
CPSF7-212ENST00000489728 K7EQM0 130 aa7.98□□□□□ -1.13
CPSF7-212ENST00000489728 EIF3GO75821 320 aaKnown RBP eCLIP7.98□□□□□ -1.13
CPSF7-212ENST00000489728 ERCC8Q13216 396 aa7.98□□□□□ -1.13
CPSF7-212ENST00000489728 GFI1BQ5VTD9 330 aa7.98□□□□□ -1.13
CPSF7-212ENST00000489728 C9orf62Q8N4C0 152 aa7.98□□□□□ -1.13
CPSF7-212ENST00000489728 MBD3L1Q8WWY6 194 aa7.98□□□□□ -1.13
CPSF7-212ENST00000489728 LOC102723971A0A1B0GUV8 181 aa7.97□□□□□ -1.13
CPSF7-212ENST00000489728 A0A1B0GVG6 124 aa7.97□□□□□ -1.13
CPSF7-212ENST00000489728 C7orf71A4D174 169 aa7.97□□□□□ -1.13
CPSF7-212ENST00000489728 GGTLC3B5MD39 225 aa7.97□□□□□ -1.13
CPSF7-212ENST00000489728 FHITP49789 147 aa7.97□□□□□ -1.13
CPSF7-212ENST00000489728 PPT1P50897 306 aa7.97□□□□□ -1.13
CPSF7-212ENST00000489728 ZNF493Q6ZR52 646 aa7.97□□□□□ -1.13
CPSF7-212ENST00000489728 IQCF2Q8IXL9 164 aa7.97□□□□□ -1.13
CPSF7-212ENST00000489728 FAM213BQ8TBF2 198 aa7.97□□□□□ -1.13
CPSF7-212ENST00000489728 VGLL1Q99990 258 aa7.97□□□□□ -1.13
CPSF7-212ENST00000489728 PYGO2Q9BRQ0 406 aa7.97□□□□□ -1.13
CPSF7-212ENST00000489728 LINC00467Q9BRT7 94 aa7.97□□□□□ -1.13
CPSF7-212ENST00000489728 NIPSNAP3BQ9BS92 247 aa7.97□□□□□ -1.13
CPSF7-212ENST00000489728 CXorf65A6NEN9 183 aa7.96□□□□□ -1.14
CPSF7-212ENST00000489728 C11orf94C9JXX5 98 aa7.96□□□□□ -1.14
CPSF7-212ENST00000489728 TCRAP04437 139 aa7.96□□□□□ -1.14
CPSF7-212ENST00000489728 SPART-AS1P0CW21 52 aa7.96□□□□□ -1.14
CPSF7-212ENST00000489728 GOLT1AQ6ZVE7 132 aa7.96□□□□□ -1.14
CPSF7-212ENST00000489728 ZFAND2AQ8N6M9 145 aa7.96□□□□□ -1.14
CPSF7-212ENST00000489728 TMEM263Q8WUH6 116 aaKnown RBP7.96□□□□□ -1.14
CPSF7-212ENST00000489728 C16orf74Q96GX8 76 aa7.96□□□□□ -1.14
CPSF7-212ENST00000489728 LINC01587Q99440 93 aa7.96□□□□□ -1.14
CPSF7-212ENST00000489728 ATG101Q9BSB4 218 aa7.96□□□□□ -1.14
CPSF7-212ENST00000489728 EPDR1Q9UM22 224 aa7.96□□□□□ -1.14
CPSF7-212ENST00000489728 TRAV1-1A0A0B4J248 108 aa7.95□□□□□ -1.14
CPSF7-212ENST00000489728 FAM74A7A6NL05 159 aa7.95□□□□□ -1.14
CPSF7-212ENST00000489728 LYRM9A8MSI8 78 aa7.95□□□□□ -1.14
CPSF7-212ENST00000489728 TEX46H3BTG2 121 aa7.95□□□□□ -1.14
CPSF7-212ENST00000489728 DEFB4AO15263 64 aa7.95□□□□□ -1.14
CPSF7-212ENST00000489728 GPX1P07203 203 aa7.95□□□□□ -1.14
CPSF7-212ENST00000489728 H2AFB1P0C5Y9 115 aa7.95□□□□□ -1.14
CPSF7-212ENST00000489728 SULT1A2P50226 295 aa7.95□□□□□ -1.14
CPSF7-212ENST00000489728 SUMO1P63165 101 aaKnown RBP7.95□□□□□ -1.14
CPSF7-212ENST00000489728 CCDC28AQ8IWP9 274 aa7.95□□□□□ -1.14
CPSF7-212ENST00000489728 CYB561D1Q8N8Q1 229 aa7.95□□□□□ -1.14
CPSF7-212ENST00000489728 TMEM75Q8N9X5 138 aa7.95□□□□□ -1.14
CPSF7-212ENST00000489728 SFT2D1Q8WV19 159 aa7.95□□□□□ -1.14
CPSF7-212ENST00000489728 HIST1H2BAQ96A08 127 aa7.95□□□□□ -1.14
CPSF7-212ENST00000489728 NDFIP1Q9BT67 221 aa7.95□□□□□ -1.14
CPSF7-212ENST00000489728 PLA2G2EQ9NZK7 142 aa7.95□□□□□ -1.14
CPSF7-212ENST00000489728 TRAV12-3A0A0B4J271 114 aa7.94□□□□□ -1.14
CPSF7-212ENST00000489728 ZNF324O75467 553 aaPredicted RBP7.94□□□□□ -1.14
CPSF7-212ENST00000489728 PRB4P10163 310 aaPredicted RBP7.94□□□□□ -1.14
CPSF7-212ENST00000489728 FGF8P55075 233 aaPredicted RBP7.94□□□□□ -1.14
CPSF7-212ENST00000489728 CD300CQ08708 224 aa7.94□□□□□ -1.14
CPSF7-212ENST00000489728 KIR3DS1Q14943 382 aa7.94□□□□□ -1.14
CPSF7-212ENST00000489728 ZFAND6Q6FIF0 208 aa7.94□□□□□ -1.14
CPSF7-212ENST00000489728 CEMP1Q6PRD7 247 aaPredicted RBP7.94□□□□□ -1.14
CPSF7-212ENST00000489728 ZNF680Q8NEM1 530 aa7.94□□□□□ -1.14
CPSF7-212ENST00000489728 Q8TAT8 98 aa7.94□□□□□ -1.14
CPSF7-212ENST00000489728 RNASE8Q8TDE3 154 aaKnown RBP7.94□□□□□ -1.14
CPSF7-212ENST00000489728 DKK2Q9UBU2 259 aa7.94□□□□□ -1.14
CPSF7-212ENST00000489728 RPH3ALQ9UNE2 315 aa7.94□□□□□ -1.14
CPSF7-212ENST00000489728 KLK5Q9Y337 293 aaPredicted RBP7.94□□□□□ -1.14
CPSF7-212ENST00000489728 YTHDF2Q9Y5A9 579 aaKnown RBP7.94□□□□□ -1.14
CPSF7-212ENST00000489728 ZNF705GA8MUZ8 300 aaPredicted RBP7.93□□□□□ -1.14
CPSF7-212ENST00000489728 F6UZH7 168 aa7.93□□□□□ -1.14
CPSF7-212ENST00000489728 IFNA7P01567 189 aa7.93□□□□□ -1.14
CPSF7-212ENST00000489728 RNASE4P34096 147 aaKnown RBP7.93□□□□□ -1.14
CPSF7-212ENST00000489728 TCTAP57738 103 aa7.93□□□□□ -1.14
CPSF7-212ENST00000489728 NANOS2P60321 138 aaKnown RBP7.93□□□□□ -1.14
CPSF7-212ENST00000489728 GNG5P63218 68 aa7.93□□□□□ -1.14
CPSF7-212ENST00000489728 BTN1A1Q13410 526 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms