RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 A0A087WWC5 75 aa10.59□□□□□ -0.71
VPS26A-205ENST00000489656 PGPEP1LA6NFU8 196 aa10.59□□□□□ -0.71
VPS26A-205ENST00000489656 OR4C46A6NHA9 309 aa10.59□□□□□ -0.71
VPS26A-205ENST00000489656 K7EN84 100 aa10.59□□□□□ -0.71
VPS26A-205ENST00000489656 INSL3P51460 131 aa10.59□□□□□ -0.71
VPS26A-205ENST00000489656 ATRAIDQ6UW56 229 aa10.59□□□□□ -0.71
VPS26A-205ENST00000489656 COX8CQ7Z4L0 72 aa10.59□□□□□ -0.71
VPS26A-205ENST00000489656 WFDC3Q8IUB2 231 aa10.59□□□□□ -0.71
VPS26A-205ENST00000489656 TMEM183AQ8IXX5 376 aa10.59□□□□□ -0.71
VPS26A-205ENST00000489656 FAM24BQ8N5W8 94 aa10.59□□□□□ -0.71
VPS26A-205ENST00000489656 C3orf56Q8N813 242 aa10.59□□□□□ -0.71
VPS26A-205ENST00000489656 ISOC2Q96AB3 205 aa10.59□□□□□ -0.71
VPS26A-205ENST00000489656 VGLL1Q99990 258 aa10.59□□□□□ -0.71
VPS26A-205ENST00000489656 ZNF256Q9Y2P7 627 aaPredicted RBP10.59□□□□□ -0.71
VPS26A-205ENST00000489656 C7orf77A4D0Y5 90 aa10.58□□□□□ -0.72
VPS26A-205ENST00000489656 NPIPB6E9PJ23 425 aa10.58□□□□□ -0.72
VPS26A-205ENST00000489656 GCGP01275 180 aa10.58□□□□□ -0.72
VPS26A-205ENST00000489656 TFPI2P48307 235 aa10.58□□□□□ -0.72
VPS26A-205ENST00000489656 PRNTQ86SH4 94 aa10.58□□□□□ -0.72
VPS26A-205ENST00000489656 WFDC9Q8NEX5 89 aa10.58□□□□□ -0.72
VPS26A-205ENST00000489656 OR8A1Q8NGG7 326 aa10.58□□□□□ -0.72
VPS26A-205ENST00000489656 SGK494Q96LW2 274 aa10.58□□□□□ -0.72
VPS26A-205ENST00000489656 BIN3Q9NQY0 253 aa10.58□□□□□ -0.72
VPS26A-205ENST00000489656 LENEPQ9Y5L5 61 aa10.58□□□□□ -0.72
VPS26A-205ENST00000489656 STAB1Q9NY15 2570 aa10.58□□□□□ -0.72
VPS26A-205ENST00000489656 CMYA5Q8N3K9 4069 aa10.57□□□□□ -0.72
VPS26A-205ENST00000489656 IZUMO1RA6ND01 250 aa10.57□□□□□ -0.72
VPS26A-205ENST00000489656 ZNF688P0C7X2 276 aa10.57□□□□□ -0.72
VPS26A-205ENST00000489656 ZNF138P52744 262 aa10.57□□□□□ -0.72
VPS26A-205ENST00000489656 SAPCD1Q5SSQ6 148 aa10.57□□□□□ -0.72
VPS26A-205ENST00000489656 TMEM78Q5T7P6 136 aa10.57□□□□□ -0.72
VPS26A-205ENST00000489656 OR10J6PQ8NGY7 276 aa10.57□□□□□ -0.72
VPS26A-205ENST00000489656 LINC00477Q96M19 166 aa10.57□□□□□ -0.72
VPS26A-205ENST00000489656 PRR25Q96S07 402 aa10.57□□□□□ -0.72
VPS26A-205ENST00000489656 MCRIP2Q9BUT9 160 aaKnown RBP10.57□□□□□ -0.72
VPS26A-205ENST00000489656 AGPAT4-IT1Q9H0P7 198 aa10.57□□□□□ -0.72
VPS26A-205ENST00000489656 TRBV7-9A0A0J9YWB2 115 aa10.56□□□□□ -0.72
VPS26A-205ENST00000489656 MT-ND4LP03901 98 aa10.56□□□□□ -0.72
VPS26A-205ENST00000489656 PSMG4Q5JS54 123 aa10.56□□□□□ -0.72
VPS26A-205ENST00000489656 C9orf66Q5T8R8 295 aa10.56□□□□□ -0.72
VPS26A-205ENST00000489656 LCE2AQ5TA79 106 aaPredicted RBP10.56□□□□□ -0.72
VPS26A-205ENST00000489656 FOXI2Q6ZQN5 318 aa10.56□□□□□ -0.72
VPS26A-205ENST00000489656 FAM231DQ6ZW35 169 aa10.56□□□□□ -0.72
VPS26A-205ENST00000489656 ANAPC16Q96DE5 110 aa10.56□□□□□ -0.72
VPS26A-205ENST00000489656 CTDSP1Q9GZU7 261 aa10.56□□□□□ -0.72
VPS26A-205ENST00000489656 TMEM242Q9NWH2 141 aa10.56□□□□□ -0.72
VPS26A-205ENST00000489656 AURKAIP1Q9NWT8 199 aaPredicted RBP10.56□□□□□ -0.72
VPS26A-205ENST00000489656 ZNF492Q9P255 531 aa10.56□□□□□ -0.72
VPS26A-205ENST00000489656 A0A0J9YX75 114 aa10.55□□□□□ -0.72
VPS26A-205ENST00000489656 PPP1R2P9O14990 202 aa10.55□□□□□ -0.72
VPS26A-205ENST00000489656 CMC4P56277 68 aaPredicted RBP10.55□□□□□ -0.72
VPS26A-205ENST00000489656 ERCC8Q13216 396 aa10.55□□□□□ -0.72
VPS26A-205ENST00000489656 RNF212Q495C1 297 aa10.55□□□□□ -0.72
VPS26A-205ENST00000489656 NHLRC2Q8NBF2 726 aa10.55□□□□□ -0.72
VPS26A-205ENST00000489656 SFRP2Q96HF1 295 aa10.55□□□□□ -0.72
VPS26A-205ENST00000489656 FAM110AQ9BQ89 295 aa10.55□□□□□ -0.72
VPS26A-205ENST00000489656 NDFIP1Q9BT67 221 aa10.55□□□□□ -0.72
VPS26A-205ENST00000489656 MAP6D1Q9H9H5 199 aa10.55□□□□□ -0.72
VPS26A-205ENST00000489656 RPS10P5Q9NQ39 176 aa10.55□□□□□ -0.72
VPS26A-205ENST00000489656 OSTCQ9NRP0 149 aa10.55□□□□□ -0.72
VPS26A-205ENST00000489656 COL6A5A8TX70 2615 aa10.55□□□□□ -0.72
VPS26A-205ENST00000489656 ANK2Q01484 3957 aa10.54□□□□□ -0.72
VPS26A-205ENST00000489656 A8MTW9 85 aa10.54□□□□□ -0.72
VPS26A-205ENST00000489656 WIPF1O43516 503 aa10.54□□□□□ -0.72
VPS26A-205ENST00000489656 PRB4P10163 310 aaPredicted RBP10.54□□□□□ -0.72
VPS26A-205ENST00000489656 MGST1P10620 155 aaKnown RBP10.54□□□□□ -0.72
VPS26A-205ENST00000489656 CD33P20138 364 aa10.54□□□□□ -0.72
VPS26A-205ENST00000489656 HIST1H1AQ02539 215 aaPredicted RBP10.54□□□□□ -0.72
VPS26A-205ENST00000489656 BEAN1Q3B7T3 259 aa10.54□□□□□ -0.72
VPS26A-205ENST00000489656 Q8TAT8 98 aa10.54□□□□□ -0.72
VPS26A-205ENST00000489656 ZC2HC1AQ96GY0 325 aa10.54□□□□□ -0.72
VPS26A-205ENST00000489656 FAM19A4Q96LR4 140 aa10.54□□□□□ -0.72
VPS26A-205ENST00000489656 ODF3Q96PU9 254 aa10.54□□□□□ -0.72
VPS26A-205ENST00000489656 GPR61Q9BZJ8 451 aa10.54□□□□□ -0.72
VPS26A-205ENST00000489656 SAV1Q9H4B6 383 aaPredicted RBP10.54□□□□□ -0.72
VPS26A-205ENST00000489656 F6UB75 175 aa10.53□□□□□ -0.72
VPS26A-205ENST00000489656 DUSP14O95147 198 aaKnown RBP10.53□□□□□ -0.72
VPS26A-205ENST00000489656 CT45A10P0DMU9 189 aa10.53□□□□□ -0.72
VPS26A-205ENST00000489656 DEFB131AP59861 70 aa10.53□□□□□ -0.72
VPS26A-205ENST00000489656 DEFB1P60022 68 aa10.53□□□□□ -0.72
VPS26A-205ENST00000489656 OR5I1Q13606 314 aa10.53□□□□□ -0.72
VPS26A-205ENST00000489656 EBLN2Q6P2I7 272 aa10.53□□□□□ -0.72
VPS26A-205ENST00000489656 OR10G8Q8NGN5 311 aa10.53□□□□□ -0.72
VPS26A-205ENST00000489656 SPATA3Q8NHX4 192 aa10.53□□□□□ -0.72
VPS26A-205ENST00000489656 C8orf49Q96NF6 230 aa10.53□□□□□ -0.72
VPS26A-205ENST00000489656 TRRAPQ9Y4A5 3859 aa10.53□□□□□ -0.72
VPS26A-205ENST00000489656 C19orf71A6NCJ1 209 aa10.52□□□□□ -0.73
VPS26A-205ENST00000489656 CXorf65A6NEN9 183 aa10.52□□□□□ -0.73
VPS26A-205ENST00000489656 SCO1O75880 301 aa10.52□□□□□ -0.73
VPS26A-205ENST00000489656 ZNF705DP0CH99 300 aaPredicted RBP10.52□□□□□ -0.73
VPS26A-205ENST00000489656 ZNF705BP0CI00 300 aaPredicted RBP10.52□□□□□ -0.73
VPS26A-205ENST00000489656 CRISP2P16562 243 aa10.52□□□□□ -0.73
VPS26A-205ENST00000489656 ERVFC1-1P60608 527 aa10.52□□□□□ -0.73
VPS26A-205ENST00000489656 ODF3L2Q3SX64 289 aa10.52□□□□□ -0.73
VPS26A-205ENST00000489656 SMUG1Q53HV7 270 aa10.52□□□□□ -0.73
VPS26A-205ENST00000489656 IBA57Q5T440 356 aaKnown RBP10.52□□□□□ -0.73
VPS26A-205ENST00000489656 GDF5OSQ5U4N7 250 aa10.52□□□□□ -0.73
VPS26A-205ENST00000489656 APRG1Q8IVJ8 170 aa10.52□□□□□ -0.73
VPS26A-205ENST00000489656 C15orf54Q8N8G6 183 aa10.52□□□□□ -0.73
VPS26A-205ENST00000489656 TUBA4BQ9H853 241 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms