RNA–Protein interactions for RNA: ENST00000489638.5

LTA-216, Transcript of lymphotoxin alpha, humanhuman

TSL 5

Gene LTA, Length 1,377 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTA-216ENST00000489638 TRIQKQ629K1 86 aa8.8□□□□□ -1
LTA-216ENST00000489638 FAM19A4Q96LR4 140 aa8.8□□□□□ -1
LTA-216ENST00000489638 PFDN5Q99471 154 aa8.8□□□□□ -1
LTA-216ENST00000489638 MRPL16Q9NX20 251 aaKnown RBP8.8□□□□□ -1
LTA-216ENST00000489638 TRBV19A0A075B6N1 114 aa8.79□□□□□ -1
LTA-216ENST00000489638 L7N2F9 121 aa8.79□□□□□ -1
LTA-216ENST00000489638 IFNA5P01569 189 aa8.79□□□□□ -1
LTA-216ENST00000489638 RNASE4P34096 147 aaKnown RBP8.79□□□□□ -1
LTA-216ENST00000489638 VAMP2P63027 116 aa8.79□□□□□ -1
LTA-216ENST00000489638 SPANXN2Q5MJ10 180 aa8.79□□□□□ -1
LTA-216ENST00000489638 IBA57Q5T440 356 aaKnown RBP8.79□□□□□ -1
LTA-216ENST00000489638 LYPD5Q6UWN5 251 aa8.79□□□□□ -1
LTA-216ENST00000489638 MITD1Q8WV92 249 aa8.79□□□□□ -1
LTA-216ENST00000489638 AGPAT4-IT1Q9H0P7 198 aa8.79□□□□□ -1
LTA-216ENST00000489638 SLC39A9Q9NUM3 307 aa8.79□□□□□ -1
LTA-216ENST00000489638 UQCC1Q9NVA1 299 aa8.79□□□□□ -1
LTA-216ENST00000489638 MDFICQ9P1T7 246 aa8.79□□□□□ -1
LTA-216ENST00000489638 PRO0255Q9UI72 69 aa8.79□□□□□ -1
LTA-216ENST00000489638 WDR83OSQ9Y284 106 aa8.79□□□□□ -1
LTA-216ENST00000489638 LSM5Q9Y4Y9 91 aaKnown RBP8.79□□□□□ -1
LTA-216ENST00000489638 UBE2L5PA0A1B0GUS4 154 aa8.78□□□□□ -1
LTA-216ENST00000489638 CCSO14618 274 aa8.78□□□□□ -1
LTA-216ENST00000489638 MPDU1O75352 247 aa8.78□□□□□ -1
LTA-216ENST00000489638 CST7O76096 145 aa8.78□□□□□ -1
LTA-216ENST00000489638 NDUFB4O95168 129 aa8.78□□□□□ -1
LTA-216ENST00000489638 SMR3BP02814 79 aaPredicted RBP8.78□□□□□ -1
LTA-216ENST00000489638 GPX1P07203 203 aa8.78□□□□□ -1
LTA-216ENST00000489638 CRISP2P16562 243 aa8.78□□□□□ -1
LTA-216ENST00000489638 BTCP35070 178 aa8.78□□□□□ -1
LTA-216ENST00000489638 BCAP31P51572 246 aa8.78□□□□□ -1
LTA-216ENST00000489638 CAV2P51636 162 aa8.78□□□□□ -1
LTA-216ENST00000489638 CRYBA4P53673 196 aa8.78□□□□□ -1
LTA-216ENST00000489638 BAK1Q16611 211 aa8.78□□□□□ -1
LTA-216ENST00000489638 PRR9Q5T870 116 aa8.78□□□□□ -1
LTA-216ENST00000489638 LINC00477Q96M19 166 aa8.78□□□□□ -1
LTA-216ENST00000489638 C8orf49Q96NF6 230 aa8.78□□□□□ -1
LTA-216ENST00000489638 VGLL1Q99990 258 aa8.78□□□□□ -1
LTA-216ENST00000489638 TP53TG3Q9ULZ0 132 aa8.78□□□□□ -1
LTA-216ENST00000489638 PRELID1Q9Y255 219 aa8.78□□□□□ -1
LTA-216ENST00000489638 SRRM2Q9UQ35 2752 aaKnown RBP8.78□□□□□ -1
LTA-216ENST00000489638 IGKV2-40A0A087WW87 121 aaPredicted RBP8.77□□□□□ -1.01
LTA-216ENST00000489638 RGS13O14921 159 aa8.77□□□□□ -1.01
LTA-216ENST00000489638 IGKV2D-40P01614 121 aaPredicted RBP8.77□□□□□ -1.01
LTA-216ENST00000489638 HIST1H1EP10412 219 aaKnown RBP8.77□□□□□ -1.01
LTA-216ENST00000489638 HAMPP81172 84 aa8.77□□□□□ -1.01
LTA-216ENST00000489638 BAXQ07812 192 aa8.77□□□□□ -1.01
LTA-216ENST00000489638 ZNF846Q147U1 533 aa8.77□□□□□ -1.01
LTA-216ENST00000489638 MRPL23Q16540 153 aaKnown RBP8.77□□□□□ -1.01
LTA-216ENST00000489638 NEGR1Q7Z3B1 354 aa8.77□□□□□ -1.01
LTA-216ENST00000489638 EXOC3-AS1Q8N2X6 119 aa8.77□□□□□ -1.01
LTA-216ENST00000489638 C12orf45Q8N5I9 185 aaPredicted RBP8.77□□□□□ -1.01
LTA-216ENST00000489638 ZFAND2AQ8N6M9 145 aa8.77□□□□□ -1.01
LTA-216ENST00000489638 ARPC5LQ9BPX5 153 aa8.77□□□□□ -1.01
LTA-216ENST00000489638 MSRB1Q9NZV6 116 aa8.77□□□□□ -1.01
LTA-216ENST00000489638 TMEM14CQ9P0S9 112 aa8.77□□□□□ -1.01
LTA-216ENST00000489638 TIMM9Q9Y5J7 89 aa8.77□□□□□ -1.01
LTA-216ENST00000489638 LY96Q9Y6Y9 160 aa8.77□□□□□ -1.01
LTA-216ENST00000489638 IGHV1OR15-1A0A075B7D0 117 aa8.76□□□□□ -1.01
LTA-216ENST00000489638 TRAV9-2A0A087WT02 112 aa8.76□□□□□ -1.01
LTA-216ENST00000489638 FAM24AA6NFZ4 105 aa8.76□□□□□ -1.01
LTA-216ENST00000489638 CCDC160A6NGH7 325 aa8.76□□□□□ -1.01
LTA-216ENST00000489638 PRAF2O60831 178 aa8.76□□□□□ -1.01
LTA-216ENST00000489638 PYYP10082 97 aa8.76□□□□□ -1.01
LTA-216ENST00000489638 GCSHP23434 173 aa8.76□□□□□ -1.01
LTA-216ENST00000489638 RPL29P47914 159 aaKnown RBP8.76□□□□□ -1.01
LTA-216ENST00000489638 SLAQ13239 276 aa8.76□□□□□ -1.01
LTA-216ENST00000489638 PDE6HQ13956 83 aa8.76□□□□□ -1.01
LTA-216ENST00000489638 FHL2Q14192 279 aa8.76□□□□□ -1.01
LTA-216ENST00000489638 Q6ZQT7 251 aa8.76□□□□□ -1.01
LTA-216ENST00000489638 C9orf47Q6ZRZ4 202 aa8.76□□□□□ -1.01
LTA-216ENST00000489638 WFDC10BQ8IUB3 73 aa8.76□□□□□ -1.01
LTA-216ENST00000489638 BLNKQ8WV28 456 aa8.76□□□□□ -1.01
LTA-216ENST00000489638 HHLA3Q9XRX5 114 aa8.76□□□□□ -1.01
LTA-216ENST00000489638 FAM25EA8MYX2 175 aa8.75□□□□□ -1.01
LTA-216ENST00000489638 ZNF415Q09FC8 603 aa8.75□□□□□ -1.01
LTA-216ENST00000489638 VWC2Q2TAL6 325 aa8.75□□□□□ -1.01
LTA-216ENST00000489638 TMEM78Q5T7P6 136 aa8.75□□□□□ -1.01
LTA-216ENST00000489638 C20orf85Q9H1P6 137 aa8.75□□□□□ -1.01
LTA-216ENST00000489638 C11orf1Q9H5F2 150 aa8.75□□□□□ -1.01
LTA-216ENST00000489638 AAMDCQ9H7C9 122 aa8.75□□□□□ -1.01
LTA-216ENST00000489638 CENPXA8MT69 81 aa8.74□□□□□ -1.01
LTA-216ENST00000489638 E5RGE8 158 aa8.74□□□□□ -1.01
LTA-216ENST00000489638 K7EP13 123 aa8.74□□□□□ -1.01
LTA-216ENST00000489638 NMBP08949 121 aa8.74□□□□□ -1.01
LTA-216ENST00000489638 EVI2AP22794 236 aa8.74□□□□□ -1.01
LTA-216ENST00000489638 SRIP30626 198 aa8.74□□□□□ -1.01
LTA-216ENST00000489638 FAM122CQ6P4D5 195 aa8.74□□□□□ -1.01
LTA-216ENST00000489638 Q6ZSN1 163 aa8.74□□□□□ -1.01
LTA-216ENST00000489638 PCNPQ8WW12 178 aaKnown RBP8.74□□□□□ -1.01
LTA-216ENST00000489638 TRGV4A0A0C4DH28 118 aa8.73□□□□□ -1.01
LTA-216ENST00000489638 IGSF23A1L1A6 192 aa8.73□□□□□ -1.01
LTA-216ENST00000489638 FAM229AH3BQW9 127 aa8.73□□□□□ -1.01
LTA-216ENST00000489638 K7EQD1 137 aa8.73□□□□□ -1.01
LTA-216ENST00000489638 SFTA3P0C7M3 94 aa8.73□□□□□ -1.01
LTA-216ENST00000489638 FGF7P21781 194 aa8.73□□□□□ -1.01
LTA-216ENST00000489638 GCSAMLQ5JQS6 135 aa8.73□□□□□ -1.01
LTA-216ENST00000489638 Q8TAT8 98 aa8.73□□□□□ -1.01
LTA-216ENST00000489638 SDHCQ99643 169 aaPredicted RBP8.73□□□□□ -1.01
LTA-216ENST00000489638 MRPL32Q9BYC8 188 aaKnown RBP8.73□□□□□ -1.01
LTA-216ENST00000489638 ZNF492Q9P255 531 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms