RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 SAPCD1Q5SSQ6 148 aa5.99□□□□□ -1.45
SSBP1-212ENST00000489378 FAM219AQ8IW50 185 aa5.99□□□□□ -1.45
SSBP1-212ENST00000489378 LGI3Q8N145 548 aa5.99□□□□□ -1.45
SSBP1-212ENST00000489378 ENKURQ8TC29 256 aa5.99□□□□□ -1.45
SSBP1-212ENST00000489378 ZNF486Q96H40 463 aaPredicted RBP5.99□□□□□ -1.45
SSBP1-212ENST00000489378 PYGO2Q9BRQ0 406 aa5.99□□□□□ -1.45
SSBP1-212ENST00000489378 MRPL16Q9NX20 251 aaKnown RBP5.99□□□□□ -1.45
SSBP1-212ENST00000489378 Q6ZRU5 148 aa5.98□□□□□ -1.45
SSBP1-212ENST00000489378 THAP8Q8NA92 274 aa5.98□□□□□ -1.45
SSBP1-212ENST00000489378 LRRC20Q8TCA0 184 aa5.98□□□□□ -1.45
SSBP1-212ENST00000489378 RBPMSQ93062 196 aaKnown RBP5.98□□□□□ -1.45
SSBP1-212ENST00000489378 S100A16Q96FQ6 103 aaKnown RBP5.98□□□□□ -1.45
SSBP1-212ENST00000489378 ZNF479Q96JC4 524 aa5.98□□□□□ -1.45
SSBP1-212ENST00000489378 TMEM147Q9BVK8 224 aa5.98□□□□□ -1.45
SSBP1-212ENST00000489378 MRPL32Q9BYC8 188 aaKnown RBP5.98□□□□□ -1.45
SSBP1-212ENST00000489378 RNF24Q9Y225 148 aa5.98□□□□□ -1.45
SSBP1-212ENST00000489378 U3KQ87 197 aa5.98□□□□□ -1.45
SSBP1-212ENST00000489378 H3BRN7 92 aa5.97□□□□□ -1.45
SSBP1-212ENST00000489378 CDS2O95674 445 aa5.97□□□□□ -1.45
SSBP1-212ENST00000489378 CFDP00746 253 aaPredicted RBP5.97□□□□□ -1.45
SSBP1-212ENST00000489378 IGHV3-30P01768 117 aa5.97□□□□□ -1.45
SSBP1-212ENST00000489378 IGHV3-33P01772 117 aa5.97□□□□□ -1.45
SSBP1-212ENST00000489378 CT45A10P0DMU9 189 aa5.97□□□□□ -1.45
SSBP1-212ENST00000489378 IGHV3-30-3P0DP02 117 aa5.97□□□□□ -1.45
SSBP1-212ENST00000489378 IGHV3-30-5P0DP03 117 aa5.97□□□□□ -1.45
SSBP1-212ENST00000489378 BCAP31P51572 246 aa5.97□□□□□ -1.45
SSBP1-212ENST00000489378 POLR2GP62487 172 aaKnown RBP eCLIP5.97□□□□□ -1.45
SSBP1-212ENST00000489378 VWC2Q2TAL6 325 aa5.97□□□□□ -1.45
SSBP1-212ENST00000489378 GGNBP1Q5YKI7 109 aa5.97□□□□□ -1.45
SSBP1-212ENST00000489378 LHFPL1Q86WI0 220 aa5.97□□□□□ -1.45
SSBP1-212ENST00000489378 SELENOHQ8IZQ5 122 aaKnown RBP5.97□□□□□ -1.45
SSBP1-212ENST00000489378 ZNF680Q8NEM1 530 aa5.97□□□□□ -1.45
SSBP1-212ENST00000489378 GPX8Q8TED1 209 aa5.97□□□□□ -1.45
SSBP1-212ENST00000489378 ZNF431Q8TF32 576 aaPredicted RBP5.97□□□□□ -1.45
SSBP1-212ENST00000489378 BLNKQ8WV28 456 aa5.97□□□□□ -1.45
SSBP1-212ENST00000489378 VGLL1Q99990 258 aa5.97□□□□□ -1.45
SSBP1-212ENST00000489378 TMEM222Q9H0R3 208 aa5.97□□□□□ -1.45
SSBP1-212ENST00000489378 COPZ2Q9P299 210 aa5.97□□□□□ -1.45
SSBP1-212ENST00000489378 A0A087X0K7 114 aa5.96□□□□□ -1.46
SSBP1-212ENST00000489378 RBFOX3A6NFN3 312 aa5.96□□□□□ -1.46
SSBP1-212ENST00000489378 CTDSPLO15194 276 aa5.96□□□□□ -1.46
SSBP1-212ENST00000489378 RPL7P18124 248 aaKnown RBP5.96□□□□□ -1.46
SSBP1-212ENST00000489378 TCL1AP56279 114 aa5.96□□□□□ -1.46
SSBP1-212ENST00000489378 CTF1Q16619 201 aa5.96□□□□□ -1.46
SSBP1-212ENST00000489378 MORN5Q5VZ52 161 aa5.96□□□□□ -1.46
SSBP1-212ENST00000489378 TEPPQ6URK8 271 aa5.96□□□□□ -1.46
SSBP1-212ENST00000489378 DTD1Q8TEA8 209 aa5.96□□□□□ -1.46
SSBP1-212ENST00000489378 GLYATL2Q8WU03 294 aa5.96□□□□□ -1.46
SSBP1-212ENST00000489378 PCNPQ8WW12 178 aaKnown RBP5.96□□□□□ -1.46
SSBP1-212ENST00000489378 BAALCQ8WXS3 180 aa5.96□□□□□ -1.46
SSBP1-212ENST00000489378 ALKBH7Q9BT30 221 aaPredicted RBP5.96□□□□□ -1.46
SSBP1-212ENST00000489378 SHANK2-AS3Q9BTD1 123 aa5.96□□□□□ -1.46
SSBP1-212ENST00000489378 FUNDC2Q9BWH2 189 aa5.96□□□□□ -1.46
SSBP1-212ENST00000489378 RBKSQ9H477 322 aa5.96□□□□□ -1.46
SSBP1-212ENST00000489378 SSR3Q9UNL2 185 aa5.96□□□□□ -1.46
SSBP1-212ENST00000489378 TRGV4A0A0C4DH28 118 aa5.95□□□□□ -1.46
SSBP1-212ENST00000489378 USP17L23D6RBM5 183 aa5.95□□□□□ -1.46
SSBP1-212ENST00000489378 ATP6V1G1O75348 118 aa5.95□□□□□ -1.46
SSBP1-212ENST00000489378 MBP02144 154 aa5.95□□□□□ -1.46
SSBP1-212ENST00000489378 SNRPCP09234 159 aaKnown RBP5.95□□□□□ -1.46
SSBP1-212ENST00000489378 SFTA3P0C7M3 94 aa5.95□□□□□ -1.46
SSBP1-212ENST00000489378 TNFSF8P32971 234 aa5.95□□□□□ -1.46
SSBP1-212ENST00000489378 FHITP49789 147 aa5.95□□□□□ -1.46
SSBP1-212ENST00000489378 NCS1P62166 190 aa5.95□□□□□ -1.46
SSBP1-212ENST00000489378 UBE2NLQ5JXB2 153 aa5.95□□□□□ -1.46
SSBP1-212ENST00000489378 C9orf47Q6ZRZ4 202 aa5.95□□□□□ -1.46
SSBP1-212ENST00000489378 CCDC71LQ8N9Z2 235 aa5.95□□□□□ -1.46
SSBP1-212ENST00000489378 OR13C8Q8NGS7 320 aa5.95□□□□□ -1.46
SSBP1-212ENST00000489378 TMEM37Q8WXS4 190 aa5.95□□□□□ -1.46
SSBP1-212ENST00000489378 TM2D2Q9BX73 214 aa5.95□□□□□ -1.46
SSBP1-212ENST00000489378 TP53TG3Q9ULZ0 132 aa5.95□□□□□ -1.46
SSBP1-212ENST00000489378 LOC100131303A0A0U1RQF7 123 aa5.94□□□□□ -1.46
SSBP1-212ENST00000489378 SULT1A3P0DMM9 295 aa5.94□□□□□ -1.46
SSBP1-212ENST00000489378 SULT1A4P0DMN0 295 aa5.94□□□□□ -1.46
SSBP1-212ENST00000489378 LEPP41159 167 aa5.94□□□□□ -1.46
SSBP1-212ENST00000489378 SPCS2Q15005 226 aa5.94□□□□□ -1.46
SSBP1-212ENST00000489378 TDRG1Q3Y452 100 aa5.94□□□□□ -1.46
SSBP1-212ENST00000489378 ANXA2RQ3ZCQ2 193 aa5.94□□□□□ -1.46
SSBP1-212ENST00000489378 GPR107Q5VW38 600 aa5.94□□□□□ -1.46
SSBP1-212ENST00000489378 TMEM268Q5VZI3 342 aa5.94□□□□□ -1.46
SSBP1-212ENST00000489378 STEAP1BQ6NZ63 245 aa5.94□□□□□ -1.46
SSBP1-212ENST00000489378 EIF4E3Q8N5X7 224 aaKnown RBP5.94□□□□□ -1.46
SSBP1-212ENST00000489378 SAMD12Q8N8I0 201 aa5.94□□□□□ -1.46
SSBP1-212ENST00000489378 TXNDC17Q9BRA2 123 aa5.94□□□□□ -1.46
SSBP1-212ENST00000489378 TEX13DA0A0J9YY54 714 aaPredicted RBP5.93□□□□□ -1.46
SSBP1-212ENST00000489378 PCP4L1A6NKN8 68 aa5.93□□□□□ -1.46
SSBP1-212ENST00000489378 PMS2P5A8MQ11 134 aa5.93□□□□□ -1.46
SSBP1-212ENST00000489378 H3BMQ9 156 aa5.93□□□□□ -1.46
SSBP1-212ENST00000489378 MRPS12O15235 138 aaKnown RBP5.93□□□□□ -1.46
SSBP1-212ENST00000489378 ORM1P02763 201 aa5.93□□□□□ -1.46
SSBP1-212ENST00000489378 VPREB1P12018 145 aa5.93□□□□□ -1.46
SSBP1-212ENST00000489378 LSM3P62310 102 aaKnown RBP5.93□□□□□ -1.46
SSBP1-212ENST00000489378 AKAP14Q86UN6 197 aa5.93□□□□□ -1.46
SSBP1-212ENST00000489378 SNX29P2Q8IUI4 249 aa5.93□□□□□ -1.46
SSBP1-212ENST00000489378 OR1S1Q8NH92 325 aa5.93□□□□□ -1.46
SSBP1-212ENST00000489378 PAXXQ9BUH6 204 aa5.93□□□□□ -1.46
SSBP1-212ENST00000489378 ZNF331Q9NQX6 463 aaPredicted RBP5.93□□□□□ -1.46
SSBP1-212ENST00000489378 NDUFA13Q9P0J0 144 aa5.93□□□□□ -1.46
SSBP1-212ENST00000489378 HIGD1AQ9Y241 93 aa5.93□□□□□ -1.46
SSBP1-212ENST00000489378 A0A1W2PPV4 95 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms