RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 POLEQ07864 2286 aa1.36□□□□□ -2.19
XRN1-213ENST00000489241 TECTAO75443 2155 aa1.36□□□□□ -2.19
XRN1-213ENST00000489241 KLF7O75840 302 aaPredicted RBP1.36□□□□□ -2.19
XRN1-213ENST00000489241 TRACP01848 142 aa1.36□□□□□ -2.19
XRN1-213ENST00000489241 SAA1P0DJI8 122 aaPredicted RBP1.36□□□□□ -2.19
XRN1-213ENST00000489241 OR5A2Q8NGI9 324 aa1.36□□□□□ -2.19
XRN1-213ENST00000489241 OR51A4Q8NGJ6 313 aa1.36□□□□□ -2.19
XRN1-213ENST00000489241 OR5AK2Q8NH90 309 aa1.36□□□□□ -2.19
XRN1-213ENST00000489241 NABP2Q9BQ15 211 aa1.36□□□□□ -2.19
XRN1-213ENST00000489241 HELZ2Q9BYK8 2649 aaKnown RBP1.36□□□□□ -2.19
XRN1-213ENST00000489241 TMEM138Q9NPI0 162 aa1.36□□□□□ -2.19
XRN1-213ENST00000489241 MED23Q9ULK4 1368 aa1.35□□□□□ -2.19
XRN1-213ENST00000489241 ANKRD31Q8N7Z5 1873 aa1.35□□□□□ -2.19
XRN1-213ENST00000489241 ARPC5O15511 151 aa1.35□□□□□ -2.19
XRN1-213ENST00000489241 DPM2O94777 84 aa1.35□□□□□ -2.19
XRN1-213ENST00000489241 TNFSF15O95150 251 aa1.35□□□□□ -2.19
XRN1-213ENST00000489241 FREM3P0C091 2139 aa1.35□□□□□ -2.19
XRN1-213ENST00000489241 KRTAP10-4P60372 401 aaPredicted RBP1.35□□□□□ -2.19
XRN1-213ENST00000489241 C22orf24Q9Y442 160 aa1.35□□□□□ -2.19
XRN1-213ENST00000489241 DSPPQ9NZW4 1301 aa1.35□□□□□ -2.19
XRN1-213ENST00000489241 A0A096LPI6 279 aa1.34□□□□□ -2.19
XRN1-213ENST00000489241 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.34□□□□□ -2.19
XRN1-213ENST00000489241 A0A1B0GW64 132 aa1.34□□□□□ -2.19
XRN1-213ENST00000489241 ARL14EPLP0DKL9 152 aa1.34□□□□□ -2.19
XRN1-213ENST00000489241 CCDC153Q494R4 210 aa1.34□□□□□ -2.19
XRN1-213ENST00000489241 HAGHLQ6PII5 290 aaPredicted RBP1.34□□□□□ -2.19
XRN1-213ENST00000489241 SPANXCQ9NY87 97 aa1.34□□□□□ -2.19
XRN1-213ENST00000489241 PLXNA4Q9HCM2 1894 aa1.34□□□□□ -2.19
XRN1-213ENST00000489241 MYLKQ15746 1914 aa1.33□□□□□ -2.2
XRN1-213ENST00000489241 BORCS7-ASMTA0A0B4J1R7 106 aa1.33□□□□□ -2.2
XRN1-213ENST00000489241 C3orf85A0A1B0GTC6 90 aa1.33□□□□□ -2.2
XRN1-213ENST00000489241 LOC107986453A0A1B0GWG9 222 aa1.33□□□□□ -2.2
XRN1-213ENST00000489241 TMEM189A5PLL7 270 aa1.33□□□□□ -2.2
XRN1-213ENST00000489241 C9JAW5 83 aa1.33□□□□□ -2.2
XRN1-213ENST00000489241 PPYP01298 95 aa1.33□□□□□ -2.2
XRN1-213ENST00000489241 HBDP02042 147 aa1.33□□□□□ -2.2
XRN1-213ENST00000489241 MT-ND4LP03901 98 aa1.33□□□□□ -2.2
XRN1-213ENST00000489241 SCTP09683 121 aa1.33□□□□□ -2.2
XRN1-213ENST00000489241 SLC25A4P12235 298 aa1.33□□□□□ -2.2
XRN1-213ENST00000489241 CMPK1P30085 196 aa1.33□□□□□ -2.2
XRN1-213ENST00000489241 BLCAPP62952 87 aa1.33□□□□□ -2.2
XRN1-213ENST00000489241 CASC2Q6XLA1 102 aa1.33□□□□□ -2.2
XRN1-213ENST00000489241 TNFSF18Q9UNG2 199 aa1.33□□□□□ -2.2
XRN1-213ENST00000489241 HIGD1AQ9Y241 93 aa1.33□□□□□ -2.2
XRN1-213ENST00000489241 KIAA1549Q9HCM3 1950 aa1.33□□□□□ -2.2
XRN1-213ENST00000489241 COL6A6A6NMZ7 2263 aa1.33□□□□□ -2.2
XRN1-213ENST00000489241 ARHGEF10O15013 1369 aa1.33□□□□□ -2.2
XRN1-213ENST00000489241 MCM3APO60318 1980 aa1.32□□□□□ -2.2
XRN1-213ENST00000489241 IGLV3-32A0A0A0MS00 114 aa1.32□□□□□ -2.2
XRN1-213ENST00000489241 JMJD7-PLA2G4BH0Y9G9 81 aa1.32□□□□□ -2.2
XRN1-213ENST00000489241 UQCRQO14949 82 aa1.32□□□□□ -2.2
XRN1-213ENST00000489241 IGHV3-33P01772 117 aa1.32□□□□□ -2.2
XRN1-213ENST00000489241 TCRAP04437 139 aa1.32□□□□□ -2.2
XRN1-213ENST00000489241 SLC25A5P05141 298 aaKnown RBP1.32□□□□□ -2.2
XRN1-213ENST00000489241 CCL4P13236 92 aa1.32□□□□□ -2.2
XRN1-213ENST00000489241 GLIPR1L1Q6UWM5 242 aa1.32□□□□□ -2.2
XRN1-213ENST00000489241 TCTE3Q8IZS6 198 aa1.32□□□□□ -2.2
XRN1-213ENST00000489241 HEATR1Q9H583 2144 aaKnown RBP1.32□□□□□ -2.2
XRN1-213ENST00000489241 UNC13CQ8NB66 2214 aa1.32□□□□□ -2.2
XRN1-213ENST00000489241 PAEPP09466 180 aa1.31□□□□□ -2.2
XRN1-213ENST00000489241 PLPP5Q8NEB5 264 aa1.31□□□□□ -2.2
XRN1-213ENST00000489241 GSKIPQ9P0R6 139 aa1.31□□□□□ -2.2
XRN1-213ENST00000489241 OR2H2O95918 312 aa1.3□□□□□ -2.2
XRN1-213ENST00000489241 DBIP07108 87 aaKnown RBP1.3□□□□□ -2.2
XRN1-213ENST00000489241 GTF2A1P52655 376 aaPredicted RBP1.3□□□□□ -2.2
XRN1-213ENST00000489241 MORN2Q502X0 79 aa1.3□□□□□ -2.2
XRN1-213ENST00000489241 HSD17B12Q53GQ0 312 aa1.3□□□□□ -2.2
XRN1-213ENST00000489241 TMEM244Q5VVB8 128 aa1.3□□□□□ -2.2
XRN1-213ENST00000489241 CIB3Q96Q77 187 aaPredicted RBP1.3□□□□□ -2.2
XRN1-213ENST00000489241 LIMD2Q9BT23 127 aa1.3□□□□□ -2.2
XRN1-213ENST00000489241 WFDC10AQ9H1F0 79 aa1.3□□□□□ -2.2
XRN1-213ENST00000489241 MPC1Q9Y5U8 109 aa1.3□□□□□ -2.2
XRN1-213ENST00000489241 FER1L6Q2WGJ9 1857 aa1.3□□□□□ -2.2
XRN1-213ENST00000489241 FHAD1B1AJZ9 1412 aa1.3□□□□□ -2.2
XRN1-213ENST00000489241 ERBINQ96RT1 1412 aa1.3□□□□□ -2.2
XRN1-213ENST00000489241 FLG2Q5D862 2391 aaPredicted RBP1.29□□□□□ -2.2
XRN1-213ENST00000489241 LOC107984156A0A0G2JMH3 177 aa1.29□□□□□ -2.2
XRN1-213ENST00000489241 LSM3P62310 102 aaKnown RBP1.29□□□□□ -2.2
XRN1-213ENST00000489241 PSPHP78330 225 aa1.29□□□□□ -2.2
XRN1-213ENST00000489241 NEDD8Q15843 81 aa1.29□□□□□ -2.2
XRN1-213ENST00000489241 ARL17AQ8IVW1 177 aa1.29□□□□□ -2.2
XRN1-213ENST00000489241 CALML5Q9NZT1 146 aa1.29□□□□□ -2.2
XRN1-213ENST00000489241 HSPB8Q9UJY1 196 aa1.29□□□□□ -2.2
XRN1-213ENST00000489241 FGD6Q6ZV73 1430 aa1.29□□□□□ -2.2
XRN1-213ENST00000489241 ALPK3Q96L96 1907 aa1.28□□□□□ -2.2
XRN1-213ENST00000489241 TNRC6AQ8NDV7 1962 aaKnown RBP1.28□□□□□ -2.2
XRN1-213ENST00000489241 QRFPP83859 136 aa1.28□□□□□ -2.2
XRN1-213ENST00000489241 MAFIPQ8WZ33 124 aa1.28□□□□□ -2.2
XRN1-213ENST00000489241 AP1S3Q96PC3 154 aa1.28□□□□□ -2.2
XRN1-213ENST00000489241 AMELYQ99218 206 aa1.28□□□□□ -2.2
XRN1-213ENST00000489241 COL1A1P02452 1464 aaPredicted RBP1.28□□□□□ -2.2
XRN1-213ENST00000489241 XIRP1Q702N8 1843 aaKnown RBP1.28□□□□□ -2.2
XRN1-213ENST00000489241 ZFC3H1O60293 1989 aaKnown RBP1.27□□□□□ -2.21
XRN1-213ENST00000489241 IGLV3-1P01715 115 aa1.27□□□□□ -2.21
XRN1-213ENST00000489241 CD14P08571 375 aa1.27□□□□□ -2.21
XRN1-213ENST00000489241 ETV6P41212 452 aa1.27□□□□□ -2.21
XRN1-213ENST00000489241 CKS1BP61024 79 aa1.27□□□□□ -2.21
XRN1-213ENST00000489241 DEFB115Q30KQ5 88 aa1.27□□□□□ -2.21
XRN1-213ENST00000489241 IZUMO2Q6UXV1 221 aa1.27□□□□□ -2.21
XRN1-213ENST00000489241 LINC00299Q6ZSB3 139 aa1.27□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms