RNA–Protein interactions for RNA: ENST00000489212.2

LIME1-207, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 559 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-207ENST00000489212 UBE2L3P68036 154 aaKnown RBP14.95□□□□□ -0.02
LIME1-207ENST00000489212 RGS21Q2M5E4 152 aa14.95□□□□□ -0.02
LIME1-207ENST00000489212 KHDC3LQ587J8 217 aa14.95□□□□□ -0.02
LIME1-207ENST00000489212 FAM210BQ96KR6 192 aa14.95□□□□□ -0.02
LIME1-207ENST00000489212 SLC25A5P05141 298 aaKnown RBP14.94□□□□□ -0.02
LIME1-207ENST00000489212 M6PRP20645 277 aa14.94□□□□□ -0.02
LIME1-207ENST00000489212 TAS2R45P59539 299 aa14.94□□□□□ -0.02
LIME1-207ENST00000489212 RANP62826 216 aaKnown RBP14.94□□□□□ -0.02
LIME1-207ENST00000489212 CD300CQ08708 224 aa14.94□□□□□ -0.02
LIME1-207ENST00000489212 ACOT6Q3I5F7 207 aaPredicted RBP14.94□□□□□ -0.02
LIME1-207ENST00000489212 TMEM88Q6PEY1 159 aa14.94□□□□□ -0.02
LIME1-207ENST00000489212 NOP10Q9NPE3 64 aaKnown RBP14.94□□□□□ -0.02
LIME1-207ENST00000489212 TIMM8BQ9Y5J9 83 aaPredicted RBP14.94□□□□□ -0.02
LIME1-207ENST00000489212 DNAH2Q9P225 4427 aa14.93□□□□□ -0.02
LIME1-207ENST00000489212 C7orf71A4D174 169 aa14.93□□□□□ -0.02
LIME1-207ENST00000489212 CRISP2P16562 243 aa14.93□□□□□ -0.02
LIME1-207ENST00000489212 BTN1A1Q13410 526 aa14.93□□□□□ -0.02
LIME1-207ENST00000489212 ASB13Q8WXK3 278 aa14.93□□□□□ -0.02
LIME1-207ENST00000489212 Q9H3A6 140 aa14.93□□□□□ -0.02
LIME1-207ENST00000489212 ZNF324O75467 553 aaPredicted RBP14.92□□□□□ -0.02
LIME1-207ENST00000489212 PRR9Q5T870 116 aa14.92□□□□□ -0.02
LIME1-207ENST00000489212 LYPD1Q8N2G4 141 aa14.92□□□□□ -0.02
LIME1-207ENST00000489212 ZFAND2AQ8N6M9 145 aa14.92□□□□□ -0.02
LIME1-207ENST00000489212 HSD17B11Q8NBQ5 300 aa14.92□□□□□ -0.02
LIME1-207ENST00000489212 P0DMU3 169 aa14.91□□□□□ -0.02
LIME1-207ENST00000489212 FAM231AP0DMU4 169 aa14.91□□□□□ -0.02
LIME1-207ENST00000489212 FAM231CP0DMU5 169 aa14.91□□□□□ -0.02
LIME1-207ENST00000489212 ZNF266Q14584 549 aa14.91□□□□□ -0.02
LIME1-207ENST00000489212 TMEM78Q5T7P6 136 aa14.91□□□□□ -0.02
LIME1-207ENST00000489212 CCDC28AQ8IWP9 274 aa14.91□□□□□ -0.02
LIME1-207ENST00000489212 PYGO2Q9BRQ0 406 aa14.91□□□□□ -0.02
LIME1-207ENST00000489212 ZNF492Q9P255 531 aa14.91□□□□□ -0.02
LIME1-207ENST00000489212 RNF222A6NCQ9 220 aa14.9□□□□□ -0.02
LIME1-207ENST00000489212 G3V3Q6 166 aa14.9□□□□□ -0.02
LIME1-207ENST00000489212 HMGB3O15347 200 aaKnown RBP14.9□□□□□ -0.02
LIME1-207ENST00000489212 ATP6V0CP27449 155 aa14.9□□□□□ -0.02
LIME1-207ENST00000489212 RNASE4P34096 147 aaKnown RBP14.9□□□□□ -0.02
LIME1-207ENST00000489212 Q6ZQT7 251 aa14.9□□□□□ -0.02
LIME1-207ENST00000489212 LINC00612Q8N6U2 182 aa14.9□□□□□ -0.02
LIME1-207ENST00000489212 POM121L12Q8N7R1 296 aa14.9□□□□□ -0.02
LIME1-207ENST00000489212 OR10G4Q8NGN3 311 aa14.9□□□□□ -0.02
LIME1-207ENST00000489212 OR10G9Q8NGN4 311 aa14.9□□□□□ -0.02
LIME1-207ENST00000489212 OR10G7Q8NGN6 311 aa14.9□□□□□ -0.02
LIME1-207ENST00000489212 OR2G3Q8NGZ4 309 aa14.9□□□□□ -0.02
LIME1-207ENST00000489212 Q8TAT8 98 aa14.9□□□□□ -0.02
LIME1-207ENST00000489212 FXYD6-FXYD2A0A087WZ82 144 aa14.89□□□□□ -0.03
LIME1-207ENST00000489212 A0A1W2PPV4 95 aa14.89□□□□□ -0.03
LIME1-207ENST00000489212 CBY3A6NI87 242 aa14.89□□□□□ -0.03
LIME1-207ENST00000489212 GPX1P07203 203 aa14.89□□□□□ -0.03
LIME1-207ENST00000489212 OR2T35Q8NGX2 323 aa14.89□□□□□ -0.03
LIME1-207ENST00000489212 PSMG3Q9BT73 122 aaPredicted RBP14.89□□□□□ -0.03
LIME1-207ENST00000489212 DIRC3C9JPN6 131 aa14.88□□□□□ -0.03
LIME1-207ENST00000489212 F5H768 121 aa14.88□□□□□ -0.03
LIME1-207ENST00000489212 ATP5G1P05496 136 aa14.88□□□□□ -0.03
LIME1-207ENST00000489212 NMBP08949 121 aa14.88□□□□□ -0.03
LIME1-207ENST00000489212 CSN1S1P47710 185 aa14.88□□□□□ -0.03
LIME1-207ENST00000489212 ATP5G3P48201 142 aa14.88□□□□□ -0.03
LIME1-207ENST00000489212 ZNF138P52744 262 aa14.88□□□□□ -0.03
LIME1-207ENST00000489212 PQLC2Q6ZP29 291 aa14.88□□□□□ -0.03
LIME1-207ENST00000489212 SH3BGRL3Q9H299 93 aa14.88□□□□□ -0.03
LIME1-207ENST00000489212 TNFSF18Q9UNG2 199 aa14.88□□□□□ -0.03
LIME1-207ENST00000489212 RBAKDNA6NC62 111 aa14.87□□□□□ -0.03
LIME1-207ENST00000489212 C11orf72Q8NBR9 251 aa14.87□□□□□ -0.03
LIME1-207ENST00000489212 INO80EQ8NBZ0 244 aaPredicted RBP14.87□□□□□ -0.03
LIME1-207ENST00000489212 LINC00467Q9BRT7 94 aa14.87□□□□□ -0.03
LIME1-207ENST00000489212 OTORQ9NRC9 128 aa14.87□□□□□ -0.03
LIME1-207ENST00000489212 DNAH17Q9UFH2 4485 aa14.87□□□□□ -0.03
LIME1-207ENST00000489212 PGPA6NDG6 321 aa14.86□□□□□ -0.03
LIME1-207ENST00000489212 SNURFLB1AK76 121 aa14.86□□□□□ -0.03
LIME1-207ENST00000489212 CDC34P49427 236 aaPredicted RBP14.86□□□□□ -0.03
LIME1-207ENST00000489212 RPL7L1Q6DKI1 246 aaKnown RBP14.86□□□□□ -0.03
LIME1-207ENST00000489212 HYLS1Q96M11 299 aa14.86□□□□□ -0.03
LIME1-207ENST00000489212 FAT2Q9NYQ8 4349 aa14.86□□□□□ -0.03
LIME1-207ENST00000489212 TRBV7-9A0A0J9YWB2 115 aa14.85□□□□□ -0.03
LIME1-207ENST00000489212 STAG3L2P0CL84 134 aa14.85□□□□□ -0.03
LIME1-207ENST00000489212 STAG3L3P0CL85 134 aa14.85□□□□□ -0.03
LIME1-207ENST00000489212 ARL14EPLP0DKL9 152 aa14.85□□□□□ -0.03
LIME1-207ENST00000489212 EIF4E3Q8N5X7 224 aaKnown RBP14.85□□□□□ -0.03
LIME1-207ENST00000489212 RXFP4Q8TDU9 374 aa14.85□□□□□ -0.03
LIME1-207ENST00000489212 RAB24Q969Q5 203 aa14.85□□□□□ -0.03
LIME1-207ENST00000489212 GSN-AS1Q9NRJ2 163 aa14.85□□□□□ -0.03
LIME1-207ENST00000489212 NACAE9PAV3 2078 aa14.85□□□□□ -0.03
LIME1-207ENST00000489212 HECTD4Q9Y4D8 3996 aa14.84□□□□□ -0.03
LIME1-207ENST00000489212 GAGE12BA1L429 117 aa14.84□□□□□ -0.03
LIME1-207ENST00000489212 GAGE7O76087 117 aa14.84□□□□□ -0.03
LIME1-207ENST00000489212 GAGE12FP0CL80 117 aa14.84□□□□□ -0.03
LIME1-207ENST00000489212 GAGE12GP0CL81 117 aa14.84□□□□□ -0.03
LIME1-207ENST00000489212 GAGE12IP0CL82 117 aa14.84□□□□□ -0.03
LIME1-207ENST00000489212 SERF2P84101 59 aa14.84□□□□□ -0.03
LIME1-207ENST00000489212 DAZ2Q13117 558 aaKnown RBP14.84□□□□□ -0.03
LIME1-207ENST00000489212 ANXA2RQ3ZCQ2 193 aa14.84□□□□□ -0.03
LIME1-207ENST00000489212 Q6ZTI0 123 aa14.84□□□□□ -0.03
LIME1-207ENST00000489212 C15orf53Q8NAA6 179 aa14.84□□□□□ -0.03
LIME1-207ENST00000489212 TP53TG3Q9ULZ0 132 aa14.84□□□□□ -0.03
LIME1-207ENST00000489212 UBE2DNLQ8IWF7 75 aa14.83□□□□□ -0.04
LIME1-207ENST00000489212 ZNF680Q8NEM1 530 aa14.83□□□□□ -0.04
LIME1-207ENST00000489212 RPH3ALQ9UNE2 315 aa14.83□□□□□ -0.04
LIME1-207ENST00000489212 IGHV1OR15-1A0A075B7D0 117 aa14.82□□□□□ -0.04
LIME1-207ENST00000489212 MBP02144 154 aa14.82□□□□□ -0.04
LIME1-207ENST00000489212 SSX7Q7RTT5 188 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms