RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 Q8TCH9 128 aa14.06□□□□□ -0.16
NPHP4-209ENST00000489180 LY6G6EA0A0G2JKS1 128 aa14.06□□□□□ -0.16
NPHP4-209ENST00000489180 NPYP01303 97 aa14.06□□□□□ -0.16
NPHP4-209ENST00000489180 SS18Q15532 418 aa14.06□□□□□ -0.16
NPHP4-209ENST00000489180 U3KQA8 63 aa14.06□□□□□ -0.16
NPHP4-209ENST00000489180 FNDC1Q4ZHG4 1894 aaPredicted RBP14.05□□□□□ -0.16
NPHP4-209ENST00000489180 H3BRN7 92 aa14.05□□□□□ -0.16
NPHP4-209ENST00000489180 UBE2E1P51965 193 aa14.05□□□□□ -0.16
NPHP4-209ENST00000489180 DTX1Q86Y01 620 aa14.05□□□□□ -0.16
NPHP4-209ENST00000489180 LINC01356Q8N9X3 169 aa14.05□□□□□ -0.16
NPHP4-209ENST00000489180 SPTBN1Q01082 2364 aaKnown RBP14.05□□□□□ -0.16
NPHP4-209ENST00000489180 K7EN84 100 aa14.05□□□□□ -0.16
NPHP4-209ENST00000489180 VWC2LB2RUY7 222 aa14.05□□□□□ -0.16
NPHP4-209ENST00000489180 PMVKQ15126 192 aa14.05□□□□□ -0.16
NPHP4-209ENST00000489180 TSSC4Q9Y5U2 329 aaPredicted RBP14.05□□□□□ -0.16
NPHP4-209ENST00000489180 K7ERJ3 54 aa14.04□□□□□ -0.16
NPHP4-209ENST00000489180 GATA4P43694 442 aa14.04□□□□□ -0.16
NPHP4-209ENST00000489180 CDPF1Q6NVV7 123 aa14.04□□□□□ -0.16
NPHP4-209ENST00000489180 H3BMM0 161 aa14.04□□□□□ -0.16
NPHP4-209ENST00000489180 I3L3M4 83 aa14.04□□□□□ -0.16
NPHP4-209ENST00000489180 PFN2P35080 140 aa14.04□□□□□ -0.16
NPHP4-209ENST00000489180 FAM231DQ6ZW35 169 aa14.04□□□□□ -0.16
NPHP4-209ENST00000489180 UBE2WQ96B02 151 aa14.04□□□□□ -0.16
NPHP4-209ENST00000489180 FXYD5Q96DB9 178 aa14.04□□□□□ -0.16
NPHP4-209ENST00000489180 TMEM141Q96I45 108 aa14.04□□□□□ -0.16
NPHP4-209ENST00000489180 ROS1P08922 2347 aa14.04□□□□□ -0.16
NPHP4-209ENST00000489180 SDHAF1A6NFY7 115 aa14.04□□□□□ -0.16
NPHP4-209ENST00000489180 RNF223E7ERA6 249 aa14.04□□□□□ -0.16
NPHP4-209ENST00000489180 COX8AP10176 69 aa14.04□□□□□ -0.16
NPHP4-209ENST00000489180 KLF12Q9Y4X4 402 aa14.04□□□□□ -0.16
NPHP4-209ENST00000489180 MRPL35Q9NZE8 188 aaKnown RBP14.03□□□□□ -0.16
NPHP4-209ENST00000489180 MORN5Q5VZ52 161 aa14.03□□□□□ -0.16
NPHP4-209ENST00000489180 RLFQ13129 1914 aa14.03□□□□□ -0.16
NPHP4-209ENST00000489180 OVOL2Q9BRP0 275 aa14.03□□□□□ -0.16
NPHP4-209ENST00000489180 C1QTNF4Q9BXJ3 329 aa14.03□□□□□ -0.16
NPHP4-209ENST00000489180 ETDBQ3ZM63 59 aa14.02□□□□□ -0.16
NPHP4-209ENST00000489180 BVES-AS1Q5T3Y7 98 aa14.02□□□□□ -0.16
NPHP4-209ENST00000489180 PI4KAP42356 2102 aa14.02□□□□□ -0.17
NPHP4-209ENST00000489180 DEFB121Q5J5C9 76 aa14.02□□□□□ -0.17
NPHP4-209ENST00000489180 C17orf77Q96MU5 243 aa14.02□□□□□ -0.17
NPHP4-209ENST00000489180 HELZP42694 1942 aaKnown RBP14.01□□□□□ -0.17
NPHP4-209ENST00000489180 IGLV3-9A0A075B6K5 115 aa14.01□□□□□ -0.17
NPHP4-209ENST00000489180 MSMBP08118 114 aa14.01□□□□□ -0.17
NPHP4-209ENST00000489180 DOCK9Q9BZ29 2069 aa14□□□□□ -0.17
NPHP4-209ENST00000489180 IGHV1-69DA0A0B4J2H0 117 aa14□□□□□ -0.17
NPHP4-209ENST00000489180 IGHV1-69P01742 117 aa14□□□□□ -0.17
NPHP4-209ENST00000489180 LGALS9BQ3B8N2 356 aa14□□□□□ -0.17
NPHP4-209ENST00000489180 LGALS9CQ6DKI2 356 aa14□□□□□ -0.17
NPHP4-209ENST00000489180 TMEM14CQ9P0S9 112 aa14□□□□□ -0.17
NPHP4-209ENST00000489180 DKK2Q9UBU2 259 aa14□□□□□ -0.17
NPHP4-209ENST00000489180 IGHV1OR15-1A0A075B7D0 117 aa14□□□□□ -0.17
NPHP4-209ENST00000489180 K7EP34 96 aa14□□□□□ -0.17
NPHP4-209ENST00000489180 FAM120AOSQ5T036 256 aa14□□□□□ -0.17
NPHP4-209ENST00000489180 RNF166Q96A37 237 aaPredicted RBP14□□□□□ -0.17
NPHP4-209ENST00000489180 DNAJC30Q96LL9 226 aa14□□□□□ -0.17
NPHP4-209ENST00000489180 RNASE13Q5GAN3 156 aaKnown RBP14□□□□□ -0.17
NPHP4-209ENST00000489180 K7EP13 123 aa13.99□□□□□ -0.17
NPHP4-209ENST00000489180 AZU1P20160 251 aa13.99□□□□□ -0.17
NPHP4-209ENST00000489180 HLA-DMBP28068 263 aa13.99□□□□□ -0.17
NPHP4-209ENST00000489180 HEATR5AQ86XA9 2040 aa13.99□□□□□ -0.17
NPHP4-209ENST00000489180 FGF6P10767 208 aa13.99□□□□□ -0.17
NPHP4-209ENST00000489180 ZNRF2Q8NHG8 242 aa13.99□□□□□ -0.17
NPHP4-209ENST00000489180 NCOR1O75376 2440 aa13.99□□□□□ -0.17
NPHP4-209ENST00000489180 CEND1Q8N111 149 aa13.99□□□□□ -0.17
NPHP4-209ENST00000489180 IGHV2-70DA0A0C4DH43 119 aa13.98□□□□□ -0.17
NPHP4-209ENST00000489180 PSCAO43653 123 aa13.98□□□□□ -0.17
NPHP4-209ENST00000489180 Q6ZVH6 145 aa13.98□□□□□ -0.17
NPHP4-209ENST00000489180 F8WEM9 126 aa13.98□□□□□ -0.17
NPHP4-209ENST00000489180 LINC01619G3V211 115 aa13.98□□□□□ -0.17
NPHP4-209ENST00000489180 IGLC1P0CG04 106 aa13.98□□□□□ -0.17
NPHP4-209ENST00000489180 IGFBPL1Q8WX77 278 aa13.98□□□□□ -0.17
NPHP4-209ENST00000489180 DOPEY2Q9Y3R5 2298 aa13.98□□□□□ -0.17
NPHP4-209ENST00000489180 IL15RAQ13261 267 aa13.98□□□□□ -0.17
NPHP4-209ENST00000489180 PLXND1Q9Y4D7 1925 aa13.98□□□□□ -0.17
NPHP4-209ENST00000489180 IGLV3-1P01715 115 aa13.97□□□□□ -0.17
NPHP4-209ENST00000489180 UNQ6494/PRO21346Q6UXR6 183 aa13.97□□□□□ -0.17
NPHP4-209ENST00000489180 C11orf52Q96A22 123 aa13.97□□□□□ -0.17
NPHP4-209ENST00000489180 PLXNA4Q9HCM2 1894 aa13.97□□□□□ -0.17
NPHP4-209ENST00000489180 DOCK8Q8NF50 2099 aa13.97□□□□□ -0.17
NPHP4-209ENST00000489180 A0A1W2PPM0 123 aa13.97□□□□□ -0.17
NPHP4-209ENST00000489180 GAGE7O76087 117 aa13.97□□□□□ -0.17
NPHP4-209ENST00000489180 NXPH4O95158 308 aa13.97□□□□□ -0.17
NPHP4-209ENST00000489180 GAGE12FP0CL80 117 aa13.97□□□□□ -0.17
NPHP4-209ENST00000489180 GAGE12GP0CL81 117 aa13.97□□□□□ -0.17
NPHP4-209ENST00000489180 GAGE12IP0CL82 117 aa13.97□□□□□ -0.17
NPHP4-209ENST00000489180 THAP8Q8NA92 274 aa13.97□□□□□ -0.17
NPHP4-209ENST00000489180 TICRRQ7Z2Z1 1910 aa13.97□□□□□ -0.17
NPHP4-209ENST00000489180 HLA-DRB4P13762 266 aa13.97□□□□□ -0.17
NPHP4-209ENST00000489180 GAGE6Q13070 117 aa13.97□□□□□ -0.17
NPHP4-209ENST00000489180 HLA-DRB4X5D2U9 266 aa13.97□□□□□ -0.17
NPHP4-209ENST00000489180 H3BMG7 143 aa13.97□□□□□ -0.17
NPHP4-209ENST00000489180 DOCK10Q96BY6 2186 aa13.96□□□□□ -0.17
NPHP4-209ENST00000489180 CADP27708 2225 aa13.96□□□□□ -0.17
NPHP4-209ENST00000489180 TRBV25-1A0A075B6N4 114 aa13.96□□□□□ -0.17
NPHP4-209ENST00000489180 NDUFS7O75251 213 aa13.96□□□□□ -0.17
NPHP4-209ENST00000489180 C9orf153Q5TBE3 101 aa13.96□□□□□ -0.17
NPHP4-209ENST00000489180 LINC00311Q8N616 119 aa13.96□□□□□ -0.17
NPHP4-209ENST00000489180 NCOR1P1Q9H4R4 102 aa13.96□□□□□ -0.17
NPHP4-209ENST00000489180 VOPP1Q96AW1 172 aa13.96□□□□□ -0.17
NPHP4-209ENST00000489180 NDUFA12Q9UI09 145 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms